RNA–Protein interactions for RNA: ENST00000590472.5

GCDH-211, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-211ENST00000590472 JCADQ9P266 1359 aa23.32■■□□□ 1.32
GCDH-211ENST00000590472 SIRT1Q96EB6 747 aa23.32■■□□□ 1.32
GCDH-211ENST00000590472 SHPRHQ149N8 1683 aa23.29■■□□□ 1.32
GCDH-211ENST00000590472 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
GCDH-211ENST00000590472 DDX17Q92841 729 aaKnown RBP23.28■■□□□ 1.32
GCDH-211ENST00000590472 ORAI2Q96SN7 254 aa23.28■■□□□ 1.32
GCDH-211ENST00000590472 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
GCDH-211ENST00000590472 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
GCDH-211ENST00000590472 FMN2Q9NZ56 1722 aa23.26■■□□□ 1.31
GCDH-211ENST00000590472 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
GCDH-211ENST00000590472 SIN3AQ96ST3 1273 aa23.22■■□□□ 1.31
GCDH-211ENST00000590472 RGS17Q9UGC6 210 aaPredicted RBP23.22■■□□□ 1.31
GCDH-211ENST00000590472 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
GCDH-211ENST00000590472 SPATA31A6Q5VVP1 1343 aa23.22■■□□□ 1.31
GCDH-211ENST00000590472 LRP6O75581 1613 aa23.22■■□□□ 1.31
GCDH-211ENST00000590472 KIAA1210Q9ULL0 1709 aa23.22■■□□□ 1.31
GCDH-211ENST00000590472 NUTM2FA1L443 756 aa23.2■■□□□ 1.3
GCDH-211ENST00000590472 SAFB2Q14151 953 aaKnown RBP eCLIP23.2■■□□□ 1.3
GCDH-211ENST00000590472 ESCO1Q5FWF5 840 aa23.2■■□□□ 1.3
GCDH-211ENST00000590472 SOS2Q07890 1332 aaPredicted RBP23.19■■□□□ 1.3
GCDH-211ENST00000590472 LRRC59Q96AG4 307 aaKnown RBP23.19■■□□□ 1.3
GCDH-211ENST00000590472 POGKQ9P215 609 aa23.19■■□□□ 1.3
GCDH-211ENST00000590472 ARHGEF28Q8N1W1 1705 aaKnown RBP23.19■■□□□ 1.3
GCDH-211ENST00000590472 ADGRB2O60241 1585 aa23.18■■□□□ 1.3
GCDH-211ENST00000590472 L3MBTL2Q969R5 705 aa23.17■■□□□ 1.3
GCDH-211ENST00000590472 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
GCDH-211ENST00000590472 PNPLA6Q8IY17 1366 aa23.15■■□□□ 1.3
GCDH-211ENST00000590472 PXDNQ92626 1479 aa23.15■■□□□ 1.3
GCDH-211ENST00000590472 KIF1AQ12756 1690 aa23.14■■□□□ 1.29
GCDH-211ENST00000590472 NEUROD1Q13562 356 aa23.14■■□□□ 1.29
GCDH-211ENST00000590472 NPHP3Q7Z494 1330 aa23.13■■□□□ 1.29
GCDH-211ENST00000590472 USP32Q8NFA0 1604 aa23.13■■□□□ 1.29
GCDH-211ENST00000590472 FOXO3O43524 673 aa23.12■■□□□ 1.29
GCDH-211ENST00000590472 NBPF1Q3BBV0 1214 aa23.12■■□□□ 1.29
GCDH-211ENST00000590472 SOCS7O14512 581 aa23.11■■□□□ 1.29
GCDH-211ENST00000590472 HIRIP3Q9BW71 556 aaPredicted RBP23.11■■□□□ 1.29
GCDH-211ENST00000590472 MINK1Q8N4C8 1332 aaPredicted RBP23.1■■□□□ 1.29
GCDH-211ENST00000590472 NUTM2BA6NNL0 878 aaPredicted RBP23.1■■□□□ 1.29
GCDH-211ENST00000590472 NUTM2EB1AL46 878 aaPredicted RBP23.1■■□□□ 1.29
GCDH-211ENST00000590472 NUTM2AQ8IVF1 878 aaPredicted RBP23.1■■□□□ 1.29
GCDH-211ENST00000590472 ANKARQ7Z5J8 1434 aa23.09■■□□□ 1.29
GCDH-211ENST00000590472 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.29
GCDH-211ENST00000590472 XPCQ01831 940 aaPredicted RBP23.08■■□□□ 1.29
GCDH-211ENST00000590472 MEX3CQ5U5Q3 659 aaKnown RBP23.08■■□□□ 1.29
GCDH-211ENST00000590472 POTEAQ6S8J7 498 aa23.08■■□□□ 1.29
GCDH-211ENST00000590472 TRPM1Q7Z4N2 1603 aa23.07■■□□□ 1.28
GCDH-211ENST00000590472 PHF8Q9UPP1 1060 aa23.06■■□□□ 1.28
GCDH-211ENST00000590472 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
GCDH-211ENST00000590472 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
GCDH-211ENST00000590472 PRR36Q9H6K5 1346 aa23.04■■□□□ 1.28
GCDH-211ENST00000590472 EIF3AQ14152 1382 aaKnown RBP23.02■■□□□ 1.28
GCDH-211ENST00000590472 KRT28Q7Z3Y7 464 aa23.01■■□□□ 1.27
GCDH-211ENST00000590472 SPATA31A3Q5VYP0 1347 aa23■■□□□ 1.27
GCDH-211ENST00000590472 PMFBP1Q8TBY8 1022 aa22.99■■□□□ 1.27
GCDH-211ENST00000590472 ATP7BP35670 1465 aa22.98■■□□□ 1.27
GCDH-211ENST00000590472 ZNF772Q68DY9 489 aaPredicted RBP22.98■■□□□ 1.27
GCDH-211ENST00000590472 NBPF8Q3BBV2 869 aa22.97■■□□□ 1.27
GCDH-211ENST00000590472 QRICH2Q9H0J4 1663 aa22.97■■□□□ 1.27
GCDH-211ENST00000590472 ITSN1Q15811 1721 aa22.96■■□□□ 1.27
GCDH-211ENST00000590472 ADAMTS2O95450 1211 aa22.96■■□□□ 1.27
GCDH-211ENST00000590472 C8orf37Q96NL8 207 aa22.96■■□□□ 1.27
GCDH-211ENST00000590472 AFF2P51816 1311 aa22.96■■□□□ 1.27
GCDH-211ENST00000590472 TNS3Q68CZ2 1445 aa22.96■■□□□ 1.27
GCDH-211ENST00000590472 PSME1Q06323 249 aa22.95■■□□□ 1.26
GCDH-211ENST00000590472 CDK19Q9BWU1 502 aa22.95■■□□□ 1.26
GCDH-211ENST00000590472 CENPJQ9HC77 1338 aaPredicted RBP22.95■■□□□ 1.26
GCDH-211ENST00000590472 TRPM3Q9HCF6 1732 aaPredicted RBP22.94■■□□□ 1.26
GCDH-211ENST00000590472 MARF1Q9Y4F3 1742 aaKnown RBP22.94■■□□□ 1.26
GCDH-211ENST00000590472 TOPAZ1Q8N9V7 1692 aa22.94■■□□□ 1.26
GCDH-211ENST00000590472 SBNO1A3KN83 1393 aa22.94■■□□□ 1.26
GCDH-211ENST00000590472 ROCK2O75116 1388 aaKnown RBP22.94■■□□□ 1.26
GCDH-211ENST00000590472 TONSLQ96HA7 1378 aa22.94■■□□□ 1.26
GCDH-211ENST00000590472 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
GCDH-211ENST00000590472 GPRASP1Q5JY77 1395 aa22.91■■□□□ 1.26
GCDH-211ENST00000590472 NGLY1Q96IV0 654 aa22.9■■□□□ 1.26
GCDH-211ENST00000590472 ALS2Q96Q42 1657 aa22.9■■□□□ 1.26
GCDH-211ENST00000590472 ABCA3Q99758 1704 aa22.88■■□□□ 1.25
GCDH-211ENST00000590472 NGDNQ8NEJ9 315 aaKnown RBP22.88■■□□□ 1.25
GCDH-211ENST00000590472 ARHGEF10O15013 1369 aa22.88■■□□□ 1.25
GCDH-211ENST00000590472 RALGAPBQ86X10 1494 aa22.87■■□□□ 1.25
GCDH-211ENST00000590472 FNBP4Q8N3X1 1017 aaPredicted RBP22.86■■□□□ 1.25
GCDH-211ENST00000590472 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
GCDH-211ENST00000590472 CCDC61Q9Y6R9 512 aa22.86■■□□□ 1.25
GCDH-211ENST00000590472 LMOD2Q6P5Q4 547 aa22.85■■□□□ 1.25
GCDH-211ENST00000590472 POLR3AO14802 1390 aaPredicted RBP22.85■■□□□ 1.25
GCDH-211ENST00000590472 RXRBP28702 533 aa22.84■■□□□ 1.25
GCDH-211ENST00000590472 SRPK2P78362 688 aaKnown RBP22.84■■□□□ 1.25
GCDH-211ENST00000590472 CABLES1Q8TDN4 633 aa22.84■■□□□ 1.25
GCDH-211ENST00000590472 QTRT2Q9H974 415 aaKnown RBP22.84■■□□□ 1.25
GCDH-211ENST00000590472 CABP2Q9NPB3 220 aa22.84■■□□□ 1.25
GCDH-211ENST00000590472 PLEKHG3A1L390 1219 aa22.83■■□□□ 1.25
GCDH-211ENST00000590472 USP21Q9UK80 565 aa22.83■■□□□ 1.25
GCDH-211ENST00000590472 ACEP12821 1306 aa22.82■■□□□ 1.24
GCDH-211ENST00000590472 BCL9LQ86UU0 1499 aa22.81■■□□□ 1.24
GCDH-211ENST00000590472 CDK12Q9NYV4 1490 aaPredicted RBP22.81■■□□□ 1.24
GCDH-211ENST00000590472 CARD11Q9BXL7 1154 aa22.81■■□□□ 1.24
GCDH-211ENST00000590472 CRYBG1Q9Y4K1 1723 aa22.81■■□□□ 1.24
GCDH-211ENST00000590472 PPIP5K1Q6PFW1 1433 aa22.81■■□□□ 1.24
GCDH-211ENST00000590472 PLEKHG5O94827 1062 aa22.8■■□□□ 1.24
GCDH-211ENST00000590472 SLIT2O94813 1529 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 301.5 ms