RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 ORAI2Q96SN7 254 aa15.63■□□□□ 0.09
RETREG3-209ENST00000590035 LRPPRCP42704 1394 aaKnown RBP15.62■□□□□ 0.09
RETREG3-209ENST00000590035 ABCC11Q96J66 1382 aa15.62■□□□□ 0.09
RETREG3-209ENST00000590035 PXDNQ92626 1479 aa15.61■□□□□ 0.09
RETREG3-209ENST00000590035 MEX3CQ5U5Q3 659 aaKnown RBP15.61■□□□□ 0.09
RETREG3-209ENST00000590035 AFF2P51816 1311 aa15.61■□□□□ 0.09
RETREG3-209ENST00000590035 MYOM2P54296 1465 aa15.59■□□□□ 0.09
RETREG3-209ENST00000590035 NUTM2BA6NNL0 878 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-209ENST00000590035 NUTM2EB1AL46 878 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-209ENST00000590035 MAPK8IP2Q13387 824 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-209ENST00000590035 NUTM2AQ8IVF1 878 aaPredicted RBP15.59■□□□□ 0.09
RETREG3-209ENST00000590035 RXRBP28702 533 aa15.58■□□□□ 0.08
RETREG3-209ENST00000590035 UPF1Q92900 1129 aaKnown RBP eCLIP15.58■□□□□ 0.08
RETREG3-209ENST00000590035 FMN2Q9NZ56 1722 aa15.57■□□□□ 0.08
RETREG3-209ENST00000590035 ACIN1Q9UKV3 1341 aaKnown RBP15.57■□□□□ 0.08
RETREG3-209ENST00000590035 PLEKHH1Q9ULM0 1364 aa15.57■□□□□ 0.08
RETREG3-209ENST00000590035 RGS12O14924 1447 aa15.57■□□□□ 0.08
RETREG3-209ENST00000590035 YTHDC2Q9H6S0 1430 aaKnown RBP15.57■□□□□ 0.08
RETREG3-209ENST00000590035 SIRT1Q96EB6 747 aa15.56■□□□□ 0.08
RETREG3-209ENST00000590035 RGL3Q3MIN7 710 aa15.55■□□□□ 0.08
RETREG3-209ENST00000590035 NPHP3Q7Z494 1330 aa15.54■□□□□ 0.08
RETREG3-209ENST00000590035 WAPLQ7Z5K2 1190 aa15.54■□□□□ 0.08
RETREG3-209ENST00000590035 C8orf37Q96NL8 207 aa15.54■□□□□ 0.08
RETREG3-209ENST00000590035 C14orf93Q9H972 538 aaKnown RBP15.54■□□□□ 0.08
RETREG3-209ENST00000590035 TMEM132EQ6IEE7 984 aa15.53■□□□□ 0.08
RETREG3-209ENST00000590035 FNBP4Q8N3X1 1017 aaPredicted RBP15.53■□□□□ 0.08
RETREG3-209ENST00000590035 MARF1Q9Y4F3 1742 aaKnown RBP15.53■□□□□ 0.08
RETREG3-209ENST00000590035 ATRNO75882 1429 aa15.52■□□□□ 0.08
RETREG3-209ENST00000590035 KIF1AQ12756 1690 aa15.52■□□□□ 0.08
RETREG3-209ENST00000590035 RBM6P78332 1123 aaKnown RBP15.52■□□□□ 0.08
RETREG3-209ENST00000590035 QTRT2Q9H974 415 aaKnown RBP15.52■□□□□ 0.08
RETREG3-209ENST00000590035 ADGRB1O14514 1584 aa15.52■□□□□ 0.07
RETREG3-209ENST00000590035 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
RETREG3-209ENST00000590035 DLC1Q96QB1 1528 aa15.51■□□□□ 0.07
RETREG3-209ENST00000590035 ESCO1Q5FWF5 840 aa15.5■□□□□ 0.07
RETREG3-209ENST00000590035 STK26Q9P289 416 aa15.5■□□□□ 0.07
RETREG3-209ENST00000590035 BCL9LQ86UU0 1499 aa15.5■□□□□ 0.07
RETREG3-209ENST00000590035 EP400Q96L91 3159 aa15.49■□□□□ 0.07
RETREG3-209ENST00000590035 ADAMTS2O95450 1211 aa15.49■□□□□ 0.07
RETREG3-209ENST00000590035 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
RETREG3-209ENST00000590035 FOXO3O43524 673 aa15.48■□□□□ 0.07
RETREG3-209ENST00000590035 NGLY1Q96IV0 654 aa15.48■□□□□ 0.07
RETREG3-209ENST00000590035 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.48■□□□□ 0.07
RETREG3-209ENST00000590035 USP32Q8NFA0 1604 aa15.47■□□□□ 0.07
RETREG3-209ENST00000590035 RGPD8O14715 1765 aaPredicted RBP15.47■□□□□ 0.07
RETREG3-209ENST00000590035 CFAP70Q5T0N1 1121 aa15.47■□□□□ 0.07
RETREG3-209ENST00000590035 SPATA31A3Q5VYP0 1347 aa15.46■□□□□ 0.07
RETREG3-209ENST00000590035 SLIT2O94813 1529 aa15.46■□□□□ 0.07
RETREG3-209ENST00000590035 USP21Q9UK80 565 aa15.45■□□□□ 0.06
RETREG3-209ENST00000590035 TRPC5Q9UL62 973 aaPredicted RBP15.45■□□□□ 0.06
RETREG3-209ENST00000590035 DHX57Q6P158 1386 aaKnown RBP15.45■□□□□ 0.06
RETREG3-209ENST00000590035 HRCP23327 699 aa15.44■□□□□ 0.06
RETREG3-209ENST00000590035 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-209ENST00000590035 SRCAPQ6ZRS2 3230 aa15.43■□□□□ 0.06
RETREG3-209ENST00000590035 ABCA3Q99758 1704 aa15.43■□□□□ 0.06
RETREG3-209ENST00000590035 ANKARQ7Z5J8 1434 aa15.43■□□□□ 0.06
RETREG3-209ENST00000590035 NUTM2FA1L443 756 aa15.42■□□□□ 0.06
RETREG3-209ENST00000590035 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
RETREG3-209ENST00000590035 GLI3P10071 1580 aa15.41■□□□□ 0.06
RETREG3-209ENST00000590035 SBNO1A3KN83 1393 aa15.41■□□□□ 0.06
RETREG3-209ENST00000590035 PRAM1Q96QH2 718 aa15.41■□□□□ 0.06
RETREG3-209ENST00000590035 TRPM3Q9HCF6 1732 aaPredicted RBP15.4■□□□□ 0.06
RETREG3-209ENST00000590035 PHF8Q9UPP1 1060 aa15.4■□□□□ 0.06
RETREG3-209ENST00000590035 KRT28Q7Z3Y7 464 aa15.39■□□□□ 0.05
RETREG3-209ENST00000590035 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
RETREG3-209ENST00000590035 STAC3Q96MF2 364 aa15.38■□□□□ 0.05
RETREG3-209ENST00000590035 ALS2Q96Q42 1657 aa15.38■□□□□ 0.05
RETREG3-209ENST00000590035 NWD2Q9ULI1 1742 aa15.37■□□□□ 0.05
RETREG3-209ENST00000590035 RALGAPBQ86X10 1494 aa15.37■□□□□ 0.05
RETREG3-209ENST00000590035 TULP4Q9NRJ4 1543 aa15.37■□□□□ 0.05
RETREG3-209ENST00000590035 PLCH1Q4KWH8 1693 aa15.36■□□□□ 0.05
RETREG3-209ENST00000590035 UNC5CLQ8IV45 518 aa15.36■□□□□ 0.05
RETREG3-209ENST00000590035 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
RETREG3-209ENST00000590035 GJD4Q96KN9 370 aaPredicted RBP15.36■□□□□ 0.05
RETREG3-209ENST00000590035 ARHGEF28Q8N1W1 1705 aaKnown RBP15.36■□□□□ 0.05
RETREG3-209ENST00000590035 PRR36Q9H6K5 1346 aa15.36■□□□□ 0.05
RETREG3-209ENST00000590035 CRYBG1Q9Y4K1 1723 aa15.35■□□□□ 0.05
RETREG3-209ENST00000590035 ARHGEF10O15013 1369 aa15.35■□□□□ 0.05
RETREG3-209ENST00000590035 PSME1Q06323 249 aa15.33■□□□□ 0.04
RETREG3-209ENST00000590035 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
RETREG3-209ENST00000590035 POTEDQ86YR6 584 aa15.33■□□□□ 0.04
RETREG3-209ENST00000590035 NRAPQ86VF7 1730 aa15.33■□□□□ 0.04
RETREG3-209ENST00000590035 BRWD3Q6RI45 1802 aa15.32■□□□□ 0.04
RETREG3-209ENST00000590035 ONECUT3O60422 494 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-209ENST00000590035 DCAF11Q8TEB1 546 aa15.32■□□□□ 0.04
RETREG3-209ENST00000590035 TRAK1Q9UPV9 953 aa15.32■□□□□ 0.04
RETREG3-209ENST00000590035 EIF3AQ14152 1382 aaKnown RBP15.32■□□□□ 0.04
RETREG3-209ENST00000590035 ATP7BP35670 1465 aa15.32■□□□□ 0.04
RETREG3-209ENST00000590035 KIAA1210Q9ULL0 1709 aa15.31■□□□□ 0.04
RETREG3-209ENST00000590035 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
RETREG3-209ENST00000590035 POGKQ9P215 609 aa15.31■□□□□ 0.04
RETREG3-209ENST00000590035 WASLO00401 505 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-209ENST00000590035 VPS72Q15906 364 aa15.3■□□□□ 0.04
RETREG3-209ENST00000590035 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
RETREG3-209ENST00000590035 PMFBP1Q8TBY8 1022 aa15.29■□□□□ 0.04
RETREG3-209ENST00000590035 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-209ENST00000590035 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
RETREG3-209ENST00000590035 MINK1Q8N4C8 1332 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-209ENST00000590035 CCDC125Q86Z20 511 aa15.28■□□□□ 0.04
RETREG3-209ENST00000590035 KDM2AQ9Y2K7 1162 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms