RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	L3MBTL2	Q969R5	705 aa		25.16	■■□□□ 1.62
MBD1-221	ENST00000589867	MED1	Q15648	1581 aa	Predicted RBP	25.13	■■□□□ 1.61
MBD1-221	ENST00000589867	KIAA1210	Q9ULL0	1709 aa		25.12	■■□□□ 1.61
MBD1-221	ENST00000589867	NEUROD1	Q13562	356 aa		25.12	■■□□□ 1.61
MBD1-221	ENST00000589867	NHSL1	Q5SYE7	1610 aa		25.12	■■□□□ 1.61
MBD1-221	ENST00000589867	PRAM1	Q96QH2	718 aa		25.11	■■□□□ 1.61
MBD1-221	ENST00000589867	NBPF1	Q3BBV0	1214 aa		25.09	■■□□□ 1.61
MBD1-221	ENST00000589867	DDX17	Q92841	729 aa	Known RBP	25.09	■■□□□ 1.61
MBD1-221	ENST00000589867	ORAI2	Q96SN7	254 aa		25.09	■■□□□ 1.61
MBD1-221	ENST00000589867	TRAK1	Q9UPV9	953 aa		25.09	■■□□□ 1.61
MBD1-221	ENST00000589867	FMN2	Q9NZ56	1722 aa		25.08	■■□□□ 1.61
MBD1-221	ENST00000589867	DISP3	Q9P2K9	1392 aa		25.07	■■□□□ 1.6
MBD1-221	ENST00000589867	ARHGEF28	Q8N1W1	1705 aa	Known RBP	25.07	■■□□□ 1.6
MBD1-221	ENST00000589867	SAFB2	Q14151	953 aa	Known RBP eCLIP	25.06	■■□□□ 1.6
MBD1-221	ENST00000589867	ADGRB2	O60241	1585 aa		25.03	■■□□□ 1.6
MBD1-221	ENST00000589867	PCGF6	Q9BYE7	350 aa		25.02	■■□□□ 1.6
MBD1-221	ENST00000589867	JCAD	Q9P266	1359 aa		25.02	■■□□□ 1.6
MBD1-221	ENST00000589867	RGPD8	O14715	1765 aa	Predicted RBP	25.01	■■□□□ 1.59
MBD1-221	ENST00000589867	NUTM2F	A1L443	756 aa		25.01	■■□□□ 1.59
MBD1-221	ENST00000589867	TRPM1	Q7Z4N2	1603 aa		25.01	■■□□□ 1.59
MBD1-221	ENST00000589867	POGK	Q9P215	609 aa		25	■■□□□ 1.59
MBD1-221	ENST00000589867	SHPRH	Q149N8	1683 aa		24.99	■■□□□ 1.59
MBD1-221	ENST00000589867	NBPF8	Q3BBV2	869 aa		24.99	■■□□□ 1.59
MBD1-221	ENST00000589867	USP32	Q8NFA0	1604 aa		24.99	■■□□□ 1.59
MBD1-221	ENST00000589867	SOS2	Q07890	1332 aa	Predicted RBP	24.97	■■□□□ 1.59
MBD1-221	ENST00000589867	ILDR2	Q71H61	639 aa		24.97	■■□□□ 1.59
MBD1-221	ENST00000589867	MINK1	Q8N4C8	1332 aa	Predicted RBP	24.96	■■□□□ 1.59
MBD1-221	ENST00000589867	ESCO1	Q5FWF5	840 aa		24.96	■■□□□ 1.59
MBD1-221	ENST00000589867	HIRIP3	Q9BW71	556 aa	Predicted RBP	24.96	■■□□□ 1.59
MBD1-221	ENST00000589867	LRP6	O75581	1613 aa		24.95	■■□□□ 1.58
MBD1-221	ENST00000589867	PXDN	Q92626	1479 aa		24.94	■■□□□ 1.58
MBD1-221	ENST00000589867	RGS17	Q9UGC6	210 aa	Predicted RBP	24.93	■■□□□ 1.58
MBD1-221	ENST00000589867	PRR36	Q9H6K5	1346 aa		24.92	■■□□□ 1.58
MBD1-221	ENST00000589867	FOXO3	O43524	673 aa		24.91	■■□□□ 1.58
MBD1-221	ENST00000589867	PNPLA6	Q8IY17	1366 aa		24.91	■■□□□ 1.58
MBD1-221	ENST00000589867	ANKAR	Q7Z5J8	1434 aa		24.9	■■□□□ 1.58
MBD1-221	ENST00000589867	WASL	O00401	505 aa	Predicted RBP	24.9	■■□□□ 1.58
MBD1-221	ENST00000589867	LRRC59	Q96AG4	307 aa	Known RBP	24.9	■■□□□ 1.58
MBD1-221	ENST00000589867	KIF1A	Q12756	1690 aa		24.89	■■□□□ 1.58
MBD1-221	ENST00000589867	SPATA31A6	Q5VVP1	1343 aa		24.88	■■□□□ 1.57
MBD1-221	ENST00000589867	TULP4	Q9NRJ4	1543 aa		24.88	■■□□□ 1.57
MBD1-221	ENST00000589867	GPRASP1	Q5JY77	1395 aa		24.88	■■□□□ 1.57
MBD1-221	ENST00000589867	NPHP3	Q7Z494	1330 aa		24.87	■■□□□ 1.57
MBD1-221	ENST00000589867	XPC	Q01831	940 aa	Predicted RBP	24.87	■■□□□ 1.57
MBD1-221	ENST00000589867	TONSL	Q96HA7	1378 aa		24.87	■■□□□ 1.57
MBD1-221	ENST00000589867	PHF8	Q9UPP1	1060 aa		24.85	■■□□□ 1.57
MBD1-221	ENST00000589867	ROCK2	O75116	1388 aa	Known RBP	24.84	■■□□□ 1.57
MBD1-221	ENST00000589867	ATP7B	P35670	1465 aa		24.83	■■□□□ 1.57
MBD1-221	ENST00000589867	QRICH2	Q9H0J4	1663 aa		24.82	■■□□□ 1.56
MBD1-221	ENST00000589867	COL22A1	Q8NFW1	1626 aa	Predicted RBP	24.82	■■□□□ 1.56
MBD1-221	ENST00000589867	RALGAPB	Q86X10	1494 aa		24.82	■■□□□ 1.56
MBD1-221	ENST00000589867	CENPJ	Q9HC77	1338 aa	Predicted RBP	24.82	■■□□□ 1.56
MBD1-221	ENST00000589867	CDK19	Q9BWU1	502 aa		24.81	■■□□□ 1.56
MBD1-221	ENST00000589867	PMFBP1	Q8TBY8	1022 aa		24.8	■■□□□ 1.56
MBD1-221	ENST00000589867	PHF23	Q9BUL5	403 aa	Predicted RBP	24.8	■■□□□ 1.56
MBD1-221	ENST00000589867	EIF3A	Q14152	1382 aa	Known RBP	24.79	■■□□□ 1.56
MBD1-221	ENST00000589867	NUTM2B	A6NNL0	878 aa	Predicted RBP	24.78	■■□□□ 1.56
MBD1-221	ENST00000589867	NUTM2E	B1AL46	878 aa	Predicted RBP	24.78	■■□□□ 1.56
MBD1-221	ENST00000589867	KRT28	Q7Z3Y7	464 aa		24.78	■■□□□ 1.56
MBD1-221	ENST00000589867	NUTM2A	Q8IVF1	878 aa	Predicted RBP	24.78	■■□□□ 1.56
MBD1-221	ENST00000589867	NUDT16	Q96DE0	195 aa	Known RBP	24.78	■■□□□ 1.56
MBD1-221	ENST00000589867	TOPAZ1	Q8N9V7	1692 aa		24.78	■■□□□ 1.56
MBD1-221	ENST00000589867	SPATA31A3	Q5VYP0	1347 aa		24.77	■■□□□ 1.56
MBD1-221	ENST00000589867	CLSPN	Q9HAW4	1339 aa		24.77	■■□□□ 1.56
MBD1-221	ENST00000589867	TRPM3	Q9HCF6	1732 aa	Predicted RBP	24.76	■■□□□ 1.55
MBD1-221	ENST00000589867	POTEA	Q6S8J7	498 aa		24.76	■■□□□ 1.55
MBD1-221	ENST00000589867	ITSN1	Q15811	1721 aa		24.74	■■□□□ 1.55
MBD1-221	ENST00000589867	SBNO1	A3KN83	1393 aa		24.72	■■□□□ 1.55
MBD1-221	ENST00000589867	TNS3	Q68CZ2	1445 aa		24.71	■■□□□ 1.55
MBD1-221	ENST00000589867	CARD11	Q9BXL7	1154 aa		24.71	■■□□□ 1.55
MBD1-221	ENST00000589867	CABP2	Q9NPB3	220 aa		24.7	■■□□□ 1.54
MBD1-221	ENST00000589867	ALS2	Q96Q42	1657 aa		24.69	■■□□□ 1.54
MBD1-221	ENST00000589867	PSME1	Q06323	249 aa		24.69	■■□□□ 1.54
MBD1-221	ENST00000589867	CCDC61	Q9Y6R9	512 aa		24.69	■■□□□ 1.54
MBD1-221	ENST00000589867	PLEKHG3	A1L390	1219 aa		24.68	■■□□□ 1.54
MBD1-221	ENST00000589867	MEX3C	Q5U5Q3	659 aa	Known RBP	24.68	■■□□□ 1.54
MBD1-221	ENST00000589867	POLR3A	O14802	1390 aa	Predicted RBP	24.67	■■□□□ 1.54
MBD1-221	ENST00000589867	ADAMTS2	O95450	1211 aa		24.66	■■□□□ 1.54
MBD1-221	ENST00000589867	SBNO2	Q9Y2G9	1366 aa		24.66	■■□□□ 1.54
MBD1-221	ENST00000589867	MARF1	Q9Y4F3	1742 aa	Known RBP	24.65	■■□□□ 1.54
MBD1-221	ENST00000589867	ABCA3	Q99758	1704 aa		24.64	■■□□□ 1.54
MBD1-221	ENST00000589867	SRPK2	P78362	688 aa	Known RBP	24.64	■■□□□ 1.54
MBD1-221	ENST00000589867	NGDN	Q8NEJ9	315 aa	Known RBP	24.64	■■□□□ 1.54
MBD1-221	ENST00000589867	TIMELESS	Q9UNS1	1208 aa		24.64	■■□□□ 1.54
MBD1-221	ENST00000589867	ACE	P12821	1306 aa		24.63	■■□□□ 1.53
MBD1-221	ENST00000589867	AFF2	P51816	1311 aa		24.63	■■□□□ 1.53
MBD1-221	ENST00000589867	C8orf37	Q96NL8	207 aa		24.63	■■□□□ 1.53
MBD1-221	ENST00000589867	PPIP5K1	Q6PFW1	1433 aa		24.62	■■□□□ 1.53
MBD1-221	ENST00000589867	CCER1	Q8TC90	406 aa	Predicted RBP	24.62	■■□□□ 1.53
MBD1-221	ENST00000589867	CABLES1	Q8TDN4	633 aa		24.62	■■□□□ 1.53
MBD1-221	ENST00000589867	EVC2	Q86UK5	1308 aa		24.61	■■□□□ 1.53
MBD1-221	ENST00000589867	CRYBG1	Q9Y4K1	1723 aa		24.61	■■□□□ 1.53
MBD1-221	ENST00000589867	ARHGEF10	O15013	1369 aa		24.6	■■□□□ 1.53
MBD1-221	ENST00000589867	TESK2	Q96S53	571 aa		24.59	■■□□□ 1.53
MBD1-221	ENST00000589867	SOCS7	O14512	581 aa		24.58	■■□□□ 1.53
MBD1-221	ENST00000589867	ZNF772	Q68DY9	489 aa	Predicted RBP	24.58	■■□□□ 1.53
MBD1-221	ENST00000589867	FNBP4	Q8N3X1	1017 aa	Predicted RBP	24.58	■■□□□ 1.53
MBD1-221	ENST00000589867	CABP1	Q9NZU7	370 aa		24.58	■■□□□ 1.53
MBD1-221	ENST00000589867	ST20-MTHFS	A0A0A6YYL1	179 aa		24.56	■■□□□ 1.52
MBD1-221	ENST00000589867	LMOD2	Q6P5Q4	547 aa		24.56	■■□□□ 1.52

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