RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 HFM1A2PYH4 1435 aa27.27■■□□□ 1.96
CXXC1-211ENST00000589548 VGFO15240 615 aaPredicted RBP27.27■■□□□ 1.96
CXXC1-211ENST00000589548 RRBP1Q9P2E9 1410 aaKnown RBP27.26■■□□□ 1.95
CXXC1-211ENST00000589548 FNBP4Q8N3X1 1017 aaPredicted RBP27.26■■□□□ 1.95
CXXC1-211ENST00000589548 PXDNQ92626 1479 aa27.25■■□□□ 1.95
CXXC1-211ENST00000589548 TRPC5Q9UL62 973 aaPredicted RBP27.25■■□□□ 1.95
CXXC1-211ENST00000589548 EP400Q96L91 3159 aa27.24■■□□□ 1.95
CXXC1-211ENST00000589548 RPGRIP1LQ68CZ1 1315 aa27.2■■□□□ 1.95
CXXC1-211ENST00000589548 BCL9LQ86UU0 1499 aa27.2■■□□□ 1.95
CXXC1-211ENST00000589548 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.18■■□□□ 1.94
CXXC1-211ENST00000589548 NPHP3Q7Z494 1330 aa27.17■■□□□ 1.94
CXXC1-211ENST00000589548 IFT172Q9UG01 1749 aa27.17■■□□□ 1.94
CXXC1-211ENST00000589548 ESCO1Q5FWF5 840 aa27.16■■□□□ 1.94
CXXC1-211ENST00000589548 XPCQ01831 940 aaPredicted RBP27.15■■□□□ 1.94
CXXC1-211ENST00000589548 KNDC1Q76NI1 1749 aa27.15■■□□□ 1.94
CXXC1-211ENST00000589548 FOXD1Q16676 465 aa27.14■■□□□ 1.94
CXXC1-211ENST00000589548 FMN2Q9NZ56 1722 aa27.13■■□□□ 1.93
CXXC1-211ENST00000589548 TECPR2O15040 1411 aa27.12■■□□□ 1.93
CXXC1-211ENST00000589548 ADGRF5Q8IZF2 1346 aa27.12■■□□□ 1.93
CXXC1-211ENST00000589548 GLI3P10071 1580 aa27.11■■□□□ 1.93
CXXC1-211ENST00000589548 FOXO3O43524 673 aa27.11■■□□□ 1.93
CXXC1-211ENST00000589548 SLC4A1APQ9BWU0 796 aaKnown RBP27.11■■□□□ 1.93
CXXC1-211ENST00000589548 BRWD3Q6RI45 1802 aa27.1■■□□□ 1.93
CXXC1-211ENST00000589548 ZRANB1Q9UGI0 708 aa27.08■■□□□ 1.93
CXXC1-211ENST00000589548 PLEKHH1Q9ULM0 1364 aa27.08■■□□□ 1.93
CXXC1-211ENST00000589548 KIF1AQ12756 1690 aa27.08■■□□□ 1.92
CXXC1-211ENST00000589548 RGPD8O14715 1765 aaPredicted RBP27.07■■□□□ 1.92
CXXC1-211ENST00000589548 NUTM2FA1L443 756 aa27.07■■□□□ 1.92
CXXC1-211ENST00000589548 WAPLQ7Z5K2 1190 aa27.07■■□□□ 1.92
CXXC1-211ENST00000589548 SLIT2O94813 1529 aa27.06■■□□□ 1.92
CXXC1-211ENST00000589548 USP32Q8NFA0 1604 aa27.06■■□□□ 1.92
CXXC1-211ENST00000589548 GJD4Q96KN9 370 aaPredicted RBP27.06■■□□□ 1.92
CXXC1-211ENST00000589548 LRPPRCP42704 1394 aaKnown RBP27.06■■□□□ 1.92
CXXC1-211ENST00000589548 SPATA31E1Q6ZUB1 1445 aa27.06■■□□□ 1.92
CXXC1-211ENST00000589548 STK26Q9P289 416 aa27.05■■□□□ 1.92
CXXC1-211ENST00000589548 RALGAPBQ86X10 1494 aa27.04■■□□□ 1.92
CXXC1-211ENST00000589548 ABCC11Q96J66 1382 aa27.02■■□□□ 1.92
CXXC1-211ENST00000589548 CCDC125Q86Z20 511 aa27.02■■□□□ 1.92
CXXC1-211ENST00000589548 SPATA31A3Q5VYP0 1347 aa27.01■■□□□ 1.91
CXXC1-211ENST00000589548 ABCA3Q99758 1704 aa27.01■■□□□ 1.91
CXXC1-211ENST00000589548 CCDC144AA2RUR9 1427 aa27■■□□□ 1.91
CXXC1-211ENST00000589548 PIK3C2GO75747 1445 aa27■■□□□ 1.91
CXXC1-211ENST00000589548 TMEM132EQ6IEE7 984 aa27■■□□□ 1.91
CXXC1-211ENST00000589548 PLCH1Q4KWH8 1693 aa27■■□□□ 1.91
CXXC1-211ENST00000589548 RGL3Q3MIN7 710 aa26.99■■□□□ 1.91
CXXC1-211ENST00000589548 UNC5CLQ8IV45 518 aa26.99■■□□□ 1.91
CXXC1-211ENST00000589548 ANKRD30BQ9BXX2 1392 aa26.97■■□□□ 1.91
CXXC1-211ENST00000589548 YTHDC2Q9H6S0 1430 aaKnown RBP26.97■■□□□ 1.91
CXXC1-211ENST00000589548 BLMP54132 1417 aaPredicted RBP26.96■■□□□ 1.91
CXXC1-211ENST00000589548 NWD2Q9ULI1 1742 aa26.96■■□□□ 1.91
CXXC1-211ENST00000589548 TNS3Q68CZ2 1445 aa26.92■■□□□ 1.9
CXXC1-211ENST00000589548 KRT28Q7Z3Y7 464 aa26.92■■□□□ 1.9
CXXC1-211ENST00000589548 DEFB132Q7Z7B7 95 aa26.89■■□□□ 1.9
CXXC1-211ENST00000589548 CABLES1Q8TDN4 633 aa26.88■■□□□ 1.89
CXXC1-211ENST00000589548 NRXN1Q9ULB1 1477 aa26.87■■□□□ 1.89
CXXC1-211ENST00000589548 NRAPQ86VF7 1730 aa26.87■■□□□ 1.89
CXXC1-211ENST00000589548 SEPT12Q8IYM1 358 aa26.86■■□□□ 1.89
CXXC1-211ENST00000589548 PHF8Q9UPP1 1060 aa26.86■■□□□ 1.89
CXXC1-211ENST00000589548 VPS72Q15906 364 aa26.85■■□□□ 1.89
CXXC1-211ENST00000589548 SIRT1Q96EB6 747 aa26.85■■□□□ 1.89
CXXC1-211ENST00000589548 MPHOSPH9Q99550 1183 aa26.85■■□□□ 1.89
CXXC1-211ENST00000589548 LRP5O75197 1615 aa26.83■■□□□ 1.89
CXXC1-211ENST00000589548 TRPM3Q9HCF6 1732 aaPredicted RBP26.83■■□□□ 1.89
CXXC1-211ENST00000589548 SBNO1A3KN83 1393 aa26.83■■□□□ 1.88
CXXC1-211ENST00000589548 PLEKHG5O94827 1062 aa26.82■■□□□ 1.88
CXXC1-211ENST00000589548 C14orf93Q9H972 538 aaKnown RBP26.82■■□□□ 1.88
CXXC1-211ENST00000589548 HAP1P54257 671 aaPredicted RBP26.81■■□□□ 1.88
CXXC1-211ENST00000589548 ONECUT3O60422 494 aaPredicted RBP26.8■■□□□ 1.88
CXXC1-211ENST00000589548 ADGRB2O60241 1585 aa26.8■■□□□ 1.88
CXXC1-211ENST00000589548 PSME1Q06323 249 aa26.79■■□□□ 1.88
CXXC1-211ENST00000589548 ALS2Q96Q42 1657 aa26.79■■□□□ 1.88
CXXC1-211ENST00000589548 CFAP70Q5T0N1 1121 aa26.78■■□□□ 1.88
CXXC1-211ENST00000589548 ARHGEF10O15013 1369 aa26.78■■□□□ 1.88
CXXC1-211ENST00000589548 DLC1Q96QB1 1528 aa26.77■■□□□ 1.88
CXXC1-211ENST00000589548 SAFB2Q14151 953 aaKnown RBP eCLIP26.77■■□□□ 1.88
CXXC1-211ENST00000589548 CCDC9Q9Y3X0 531 aaKnown RBP26.77■■□□□ 1.88
CXXC1-211ENST00000589548 DHX57Q6P158 1386 aaKnown RBP26.76■■□□□ 1.87
CXXC1-211ENST00000589548 KRT27Q7Z3Y8 459 aa26.76■■□□□ 1.87
CXXC1-211ENST00000589548 PRAM1Q96QH2 718 aa26.76■■□□□ 1.87
CXXC1-211ENST00000589548 CRYBG1Q9Y4K1 1723 aa26.76■■□□□ 1.87
CXXC1-211ENST00000589548 FAM83GA6ND36 823 aa26.75■■□□□ 1.87
CXXC1-211ENST00000589548 SF3B2Q13435 895 aaKnown RBP26.75■■□□□ 1.87
CXXC1-211ENST00000589548 LMOD2Q6P5Q4 547 aa26.75■■□□□ 1.87
CXXC1-211ENST00000589548 ANKARQ7Z5J8 1434 aa26.74■■□□□ 1.87
CXXC1-211ENST00000589548 COL14A1Q05707 1796 aaKnown RBP26.74■■□□□ 1.87
CXXC1-211ENST00000589548 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
CXXC1-211ENST00000589548 ADGRB1O14514 1584 aa26.72■■□□□ 1.87
CXXC1-211ENST00000589548 RGPD1P0DJD0 1748 aa26.7■■□□□ 1.87
CXXC1-211ENST00000589548 TNS1Q9HBL0 1735 aaKnown RBP26.68■■□□□ 1.86
CXXC1-211ENST00000589548 THSD7AQ9UPZ6 1657 aa26.67■■□□□ 1.86
CXXC1-211ENST00000589548 FAM98CQ17RN3 349 aaKnown RBP26.67■■□□□ 1.86
CXXC1-211ENST00000589548 A0A0G2JS52 829 aa26.66■■□□□ 1.86
CXXC1-211ENST00000589548 PSDA5PKW4 1024 aaPredicted RBP26.66■■□□□ 1.86
CXXC1-211ENST00000589548 MYT1Q01538 1121 aa26.66■■□□□ 1.86
CXXC1-211ENST00000589548 BTG4Q9NY30 223 aa26.66■■□□□ 1.86
CXXC1-211ENST00000589548 PRR36Q9H6K5 1346 aa26.65■■□□□ 1.86
CXXC1-211ENST00000589548 POGKQ9P215 609 aa26.65■■□□□ 1.86
CXXC1-211ENST00000589548 TULP4Q9NRJ4 1543 aa26.65■■□□□ 1.86
CXXC1-211ENST00000589548 BAG6P46379 1132 aa26.64■■□□□ 1.86
CXXC1-211ENST00000589548 HIRIP3Q9BW71 556 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms