RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, humanhuman

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-215ENST00000589536 TMEM132EQ6IEE7 984 aa36.19■■■■□ 3.38
GRN-215ENST00000589536 STK26Q9P289 416 aa36.19■■■■□ 3.38
GRN-215ENST00000589536 NUTM2BA6NNL0 878 aaPredicted RBP36.17■■■■□ 3.38
GRN-215ENST00000589536 NUTM2EB1AL46 878 aaPredicted RBP36.17■■■■□ 3.38
GRN-215ENST00000589536 NUTM2AQ8IVF1 878 aaPredicted RBP36.17■■■■□ 3.38
GRN-215ENST00000589536 YTHDC2Q9H6S0 1430 aaKnown RBP36.16■■■■□ 3.38
GRN-215ENST00000589536 WAPLQ7Z5K2 1190 aa36.15■■■■□ 3.38
GRN-215ENST00000589536 SOS2Q07890 1332 aaPredicted RBP36.14■■■■□ 3.38
GRN-215ENST00000589536 ZNF772Q68DY9 489 aaPredicted RBP36.14■■■■□ 3.38
GRN-215ENST00000589536 PLEKHH1Q9ULM0 1364 aa36.14■■■■□ 3.38
GRN-215ENST00000589536 C14orf93Q9H972 538 aaKnown RBP36.13■■■■□ 3.37
GRN-215ENST00000589536 HRCP23327 699 aa36.07■■■■□ 3.36
GRN-215ENST00000589536 CFAP70Q5T0N1 1121 aa36.06■■■■□ 3.36
GRN-215ENST00000589536 SIRT1Q96EB6 747 aa36.05■■■■□ 3.36
GRN-215ENST00000589536 ESCO1Q5FWF5 840 aa36.04■■■■□ 3.36
GRN-215ENST00000589536 AFF2P51816 1311 aa36.03■■■■□ 3.36
GRN-215ENST00000589536 FMN2Q9NZ56 1722 aa36.03■■■■□ 3.36
GRN-215ENST00000589536 PXDNQ92626 1479 aa36.01■■■■□ 3.36
GRN-215ENST00000589536 NPHP3Q7Z494 1330 aa36.01■■■■□ 3.35
GRN-215ENST00000589536 DHX57Q6P158 1386 aaKnown RBP36.01■■■■□ 3.35
GRN-215ENST00000589536 COL22A1Q8NFW1 1626 aaPredicted RBP35.99■■■■□ 3.35
GRN-215ENST00000589536 C8orf37Q96NL8 207 aa35.98■■■■□ 3.35
GRN-215ENST00000589536 NUTM2FA1L443 756 aa35.97■■■■□ 3.35
GRN-215ENST00000589536 ADGRB1O14514 1584 aa35.96■■■■□ 3.35
GRN-215ENST00000589536 DLC1Q96QB1 1528 aa35.94■■■■□ 3.34
GRN-215ENST00000589536 FOXO3O43524 673 aa35.94■■■■□ 3.34
GRN-215ENST00000589536 RXRBP28702 533 aa35.93■■■■□ 3.34
GRN-215ENST00000589536 ADAMTS2O95450 1211 aa35.92■■■■□ 3.34
GRN-215ENST00000589536 CDK12Q9NYV4 1490 aaPredicted RBP35.92■■■■□ 3.34
GRN-215ENST00000589536 KIF1AQ12756 1690 aa35.91■■■■□ 3.34
GRN-215ENST00000589536 PRAM1Q96QH2 718 aa35.9■■■■□ 3.34
GRN-215ENST00000589536 XPCQ01831 940 aaPredicted RBP35.89■■■■□ 3.34
GRN-215ENST00000589536 DCAF11Q8TEB1 546 aa35.87■■■■□ 3.33
GRN-215ENST00000589536 NGLY1Q96IV0 654 aa35.85■■■■□ 3.33
GRN-215ENST00000589536 STAC3Q96MF2 364 aa35.84■■■■□ 3.33
GRN-215ENST00000589536 KDM2AQ9Y2K7 1162 aa35.84■■■■□ 3.33
GRN-215ENST00000589536 SAFB2Q14151 953 aaKnown RBP eCLIP35.83■■■■□ 3.33
GRN-215ENST00000589536 QTRT2Q9H974 415 aaKnown RBP35.83■■■■□ 3.33
GRN-215ENST00000589536 ADGRB2O60241 1585 aa35.83■■■■□ 3.33
GRN-215ENST00000589536 RGPD8O14715 1765 aaPredicted RBP35.82■■■■□ 3.33
GRN-215ENST00000589536 POGKQ9P215 609 aa35.8■■■■□ 3.32
GRN-215ENST00000589536 RBM6P78332 1123 aaKnown RBP35.79■■■■□ 3.32
GRN-215ENST00000589536 FNBP4Q8N3X1 1017 aaPredicted RBP35.79■■■■□ 3.32
GRN-215ENST00000589536 RGS12O14924 1447 aa35.78■■■■□ 3.32
GRN-215ENST00000589536 TRAK1Q9UPV9 953 aa35.78■■■■□ 3.32
GRN-215ENST00000589536 SPATA31A3Q5VYP0 1347 aa35.78■■■■□ 3.32
GRN-215ENST00000589536 PHF8Q9UPP1 1060 aa35.77■■■■□ 3.32
GRN-215ENST00000589536 USP32Q8NFA0 1604 aa35.76■■■■□ 3.32
GRN-215ENST00000589536 ANKARQ7Z5J8 1434 aa35.75■■■■□ 3.31
GRN-215ENST00000589536 MARF1Q9Y4F3 1742 aaKnown RBP35.75■■■■□ 3.31
GRN-215ENST00000589536 USP21Q9UK80 565 aa35.75■■■■□ 3.31
GRN-215ENST00000589536 KRT28Q7Z3Y7 464 aa35.74■■■■□ 3.31
GRN-215ENST00000589536 UPF1Q92900 1129 aaKnown RBP eCLIP35.73■■■■□ 3.31
GRN-215ENST00000589536 ATRNO75882 1429 aa35.7■■■■□ 3.31
GRN-215ENST00000589536 TNS3Q68CZ2 1445 aa35.7■■■■□ 3.31
GRN-215ENST00000589536 TRPC5Q9UL62 973 aaPredicted RBP35.69■■■■□ 3.3
GRN-215ENST00000589536 HIRIP3Q9BW71 556 aaPredicted RBP35.68■■■■□ 3.3
GRN-215ENST00000589536 BCL9LQ86UU0 1499 aa35.67■■■■□ 3.3
GRN-215ENST00000589536 ARHGEF28Q8N1W1 1705 aaKnown RBP35.66■■■■□ 3.3
GRN-215ENST00000589536 MINK1Q8N4C8 1332 aaPredicted RBP35.66■■■■□ 3.3
GRN-215ENST00000589536 SBNO1A3KN83 1393 aa35.65■■■■□ 3.3
GRN-215ENST00000589536 PSME1Q06323 249 aa35.65■■■■□ 3.3
GRN-215ENST00000589536 TULP4Q9NRJ4 1543 aa35.64■■■■□ 3.3
GRN-215ENST00000589536 EIF3AQ14152 1382 aaKnown RBP35.64■■■■□ 3.3
GRN-215ENST00000589536 PRR36Q9H6K5 1346 aa35.62■■■■□ 3.29
GRN-215ENST00000589536 PMFBP1Q8TBY8 1022 aa35.61■■■■□ 3.29
GRN-215ENST00000589536 WASLO00401 505 aaPredicted RBP35.6■■■■□ 3.29
GRN-215ENST00000589536 KIAA1210Q9ULL0 1709 aa35.6■■■■□ 3.29
GRN-215ENST00000589536 SLIT2O94813 1529 aa35.58■■■■□ 3.29
GRN-215ENST00000589536 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.58■■■■□ 3.29
GRN-215ENST00000589536 ARHGEF10O15013 1369 aa35.57■■■■□ 3.28
GRN-215ENST00000589536 ABCA3Q99758 1704 aa35.57■■■■□ 3.28
GRN-215ENST00000589536 TRPM3Q9HCF6 1732 aaPredicted RBP35.57■■■■□ 3.28
GRN-215ENST00000589536 CABLES1Q8TDN4 633 aa35.53■■■■□ 3.28
GRN-215ENST00000589536 ATP7BP35670 1465 aa35.51■■■■□ 3.28
GRN-215ENST00000589536 LMOD2Q6P5Q4 547 aa35.5■■■■□ 3.27
GRN-215ENST00000589536 UNC5CLQ8IV45 518 aa35.5■■■■□ 3.27
GRN-215ENST00000589536 ALS2Q96Q42 1657 aa35.49■■■■□ 3.27
GRN-215ENST00000589536 GJD4Q96KN9 370 aaPredicted RBP35.49■■■■□ 3.27
GRN-215ENST00000589536 GPRASP1Q5JY77 1395 aa35.49■■■■□ 3.27
GRN-215ENST00000589536 HAP1P54257 671 aaPredicted RBP35.48■■■■□ 3.27
GRN-215ENST00000589536 ATAD2Q6PL18 1390 aa35.47■■■■□ 3.27
GRN-215ENST00000589536 ITSN1Q15811 1721 aa35.46■■■■□ 3.27
GRN-215ENST00000589536 NBPF1Q3BBV0 1214 aa35.46■■■■□ 3.27
GRN-215ENST00000589536 RALGAPBQ86X10 1494 aa35.45■■■■□ 3.27
GRN-215ENST00000589536 GLI3P10071 1580 aa35.45■■■■□ 3.27
GRN-215ENST00000589536 PLCH1Q4KWH8 1693 aa35.45■■■■□ 3.27
GRN-215ENST00000589536 PLEKHG5O94827 1062 aa35.44■■■■□ 3.26
GRN-215ENST00000589536 NWD2Q9ULI1 1742 aa35.43■■■■□ 3.26
GRN-215ENST00000589536 NUDT16Q96DE0 195 aaKnown RBP35.42■■■■□ 3.26
GRN-215ENST00000589536 NGDNQ8NEJ9 315 aaKnown RBP35.41■■■■□ 3.26
GRN-215ENST00000589536 EP400Q96L91 3159 aa35.39■■■■□ 3.26
GRN-215ENST00000589536 CDK19Q9BWU1 502 aa35.39■■■■□ 3.26
GRN-215ENST00000589536 TOPAZ1Q8N9V7 1692 aa35.39■■■■□ 3.26
GRN-215ENST00000589536 CRYBG1Q9Y4K1 1723 aa35.37■■■■□ 3.25
GRN-215ENST00000589536 L3MBTL2Q969R5 705 aa35.36■■■■□ 3.25
GRN-215ENST00000589536 FAM83GA6ND36 823 aa35.35■■■■□ 3.25
GRN-215ENST00000589536 VPS72Q15906 364 aa35.35■■■■□ 3.25
GRN-215ENST00000589536 SIN3AQ96ST3 1273 aa35.32■■■■□ 3.24
GRN-215ENST00000589536 POLR3AO14802 1390 aaPredicted RBP35.32■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms