RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 UBAP1LF5GYI3 381 aa8.9□□□□□ -0.98
LINC01539-202ENST00000589293 DOK7Q18PE1 504 aa8.9□□□□□ -0.98
LINC01539-202ENST00000589293 SUPT6HQ7KZ85 1726 aaKnown RBP8.9□□□□□ -0.98
LINC01539-202ENST00000589293 CAMSAP1Q5T5Y3 1602 aa8.9□□□□□ -0.99
LINC01539-202ENST00000589293 A2MP01023 1474 aa8.89□□□□□ -0.99
LINC01539-202ENST00000589293 IQSEC2Q5JU85 1478 aa8.89□□□□□ -0.99
LINC01539-202ENST00000589293 MROH2AA6NES4 1674 aa8.89□□□□□ -0.99
LINC01539-202ENST00000589293 NUDT7P0C024 238 aa8.89□□□□□ -0.99
LINC01539-202ENST00000589293 RBM26Q5T8P6 1007 aaKnown RBP8.89□□□□□ -0.99
LINC01539-202ENST00000589293 DDX12PQ92771 950 aa8.89□□□□□ -0.99
LINC01539-202ENST00000589293 SOCS7O14512 581 aa8.88□□□□□ -0.99
LINC01539-202ENST00000589293 OSBPP22059 807 aa8.88□□□□□ -0.99
LINC01539-202ENST00000589293 TPRNQ4KMQ1 711 aa8.88□□□□□ -0.99
LINC01539-202ENST00000589293 TBC1D12O60347 775 aa8.87□□□□□ -0.99
LINC01539-202ENST00000589293 ZSWIM6Q9HCJ5 1215 aa8.87□□□□□ -0.99
LINC01539-202ENST00000589293 CLTCQ00610 1675 aaKnown RBP8.87□□□□□ -0.99
LINC01539-202ENST00000589293 SPATA31D1Q6ZQQ2 1576 aa8.86□□□□□ -0.99
LINC01539-202ENST00000589293 GRXCR2A6NFK2 248 aa8.86□□□□□ -0.99
LINC01539-202ENST00000589293 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
LINC01539-202ENST00000589293 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
LINC01539-202ENST00000589293 ZNF335Q9H4Z2 1342 aaPredicted RBP8.85□□□□□ -0.99
LINC01539-202ENST00000589293 WASHC2CQ9Y4E1 1318 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 PLA2R1Q13018 1463 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 KIF3BO15066 747 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 TSPY4P0CV99 314 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 TSPY10P0CW01 314 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 PCDHGA10Q9Y5H3 936 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 INO80Q9ULG1 1556 aaPredicted RBP8.85□□□□□ -0.99
LINC01539-202ENST00000589293 CEP170BQ9Y4F5 1589 aaPredicted RBP8.85□□□□□ -0.99
LINC01539-202ENST00000589293 EHBP1L1Q8N3D4 1523 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 ADGBQ8N7X0 1667 aa8.85□□□□□ -0.99
LINC01539-202ENST00000589293 LTBP4Q8N2S1 1624 aa8.84□□□□□ -0.99
LINC01539-202ENST00000589293 MYO3AQ8NEV4 1616 aa8.84□□□□□ -0.99
LINC01539-202ENST00000589293 GPR37O15354 613 aa8.84□□□□□ -0.99
LINC01539-202ENST00000589293 TOM1O60784 492 aa8.84□□□□□ -0.99
LINC01539-202ENST00000589293 HOXB1P14653 301 aaPredicted RBP8.84□□□□□ -0.99
LINC01539-202ENST00000589293 PTPRKQ15262 1439 aa8.84□□□□□ -0.99
LINC01539-202ENST00000589293 ILDR2Q71H61 639 aa8.84□□□□□ -0.99
LINC01539-202ENST00000589293 ZNF644Q9H582 1327 aaPredicted RBP8.83□□□□□ -1
LINC01539-202ENST00000589293 PLXNC1O60486 1568 aa8.83□□□□□ -1
LINC01539-202ENST00000589293 RTEL1-TNFRSF6BF6WH68 1400 aa8.83□□□□□ -1
LINC01539-202ENST00000589293 ANKLE2Q86XL3 938 aa8.83□□□□□ -1
LINC01539-202ENST00000589293 THEMISQ8N1K5 641 aaPredicted RBP8.83□□□□□ -1
LINC01539-202ENST00000589293 ZNF710Q8N1W2 664 aa8.83□□□□□ -1
LINC01539-202ENST00000589293 LHX6Q9UPM6 363 aa8.83□□□□□ -1
LINC01539-202ENST00000589293 DHX29Q7Z478 1369 aaKnown RBP8.83□□□□□ -1
LINC01539-202ENST00000589293 TNRQ92752 1358 aa8.83□□□□□ -1
LINC01539-202ENST00000589293 A2ML1A8K2U0 1454 aa8.83□□□□□ -1
LINC01539-202ENST00000589293 ZNF142P52746 1687 aaPredicted RBP8.82□□□□□ -1
LINC01539-202ENST00000589293 SNPHO15079 494 aa8.82□□□□□ -1
LINC01539-202ENST00000589293 ST18O60284 1047 aa8.82□□□□□ -1
LINC01539-202ENST00000589293 FOSBP53539 338 aa8.82□□□□□ -1
LINC01539-202ENST00000589293 PIP4K2BP78356 416 aa8.82□□□□□ -1
LINC01539-202ENST00000589293 CCDC141Q6ZP82 1450 aa8.82□□□□□ -1
LINC01539-202ENST00000589293 CEP162Q5TB80 1403 aa8.81□□□□□ -1
LINC01539-202ENST00000589293 RIMBP2O15034 1052 aa8.81□□□□□ -1
LINC01539-202ENST00000589293 ZC3H15Q8WU90 426 aaKnown RBP8.81□□□□□ -1
LINC01539-202ENST00000589293 TIAM1Q13009 1591 aa8.81□□□□□ -1
LINC01539-202ENST00000589293 PHF14O94880 888 aa8.8□□□□□ -1
LINC01539-202ENST00000589293 TCOF1Q13428 1488 aaKnown RBP8.8□□□□□ -1
LINC01539-202ENST00000589293 KDM5DQ9BY66 1539 aa8.8□□□□□ -1
LINC01539-202ENST00000589293 MBD5Q9P267 1494 aa8.79□□□□□ -1
LINC01539-202ENST00000589293 FBXO31Q5XUX0 539 aaPredicted RBP8.79□□□□□ -1
LINC01539-202ENST00000589293 SMYD5Q6GMV2 418 aa8.79□□□□□ -1
LINC01539-202ENST00000589293 FAM135AQ9P2D6 1515 aa8.79□□□□□ -1
LINC01539-202ENST00000589293 CAMSAP2Q08AD1 1489 aa8.78□□□□□ -1
LINC01539-202ENST00000589293 NCOA2Q15596 1464 aa8.78□□□□□ -1
LINC01539-202ENST00000589293 EN1Q05925 392 aaPredicted RBP8.78□□□□□ -1
LINC01539-202ENST00000589293 CDHR5Q9HBB8 845 aa8.78□□□□□ -1
LINC01539-202ENST00000589293 CPS1P31327 1500 aa8.78□□□□□ -1
LINC01539-202ENST00000589293 PZPP20742 1482 aa8.77□□□□□ -1
LINC01539-202ENST00000589293 DNMT1P26358 1616 aaKnown RBP8.77□□□□□ -1.01
LINC01539-202ENST00000589293 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.77□□□□□ -1.01
LINC01539-202ENST00000589293 TSR1Q2NL82 804 aaKnown RBP8.77□□□□□ -1.01
LINC01539-202ENST00000589293 MIA2Q96PC5 1412 aa8.77□□□□□ -1.01
LINC01539-202ENST00000589293 NLRP1Q9C000 1473 aa8.77□□□□□ -1.01
LINC01539-202ENST00000589293 SHANK2Q9UPX8 1470 aa8.77□□□□□ -1.01
LINC01539-202ENST00000589293 ZNF316A6NFI3 1004 aaPredicted RBP8.76□□□□□ -1.01
LINC01539-202ENST00000589293 ZNF454Q8N9F8 522 aa8.76□□□□□ -1.01
LINC01539-202ENST00000589293 ADAM33Q9BZ11 813 aa8.76□□□□□ -1.01
LINC01539-202ENST00000589293 NPDC1Q9NQX5 325 aaPredicted RBP8.76□□□□□ -1.01
LINC01539-202ENST00000589293 UGGT1Q9NYU2 1555 aa8.76□□□□□ -1.01
LINC01539-202ENST00000589293 POLR1AO95602 1720 aaPredicted RBP8.76□□□□□ -1.01
LINC01539-202ENST00000589293 NPHP4O75161 1426 aaPredicted RBP8.75□□□□□ -1.01
LINC01539-202ENST00000589293 HSPA1LP34931 641 aa8.75□□□□□ -1.01
LINC01539-202ENST00000589293 MARVELD3Q96A59 401 aa8.75□□□□□ -1.01
LINC01539-202ENST00000589293 RBM33Q96EV2 1170 aaKnown RBP8.75□□□□□ -1.01
LINC01539-202ENST00000589293 EPAS1Q99814 870 aa8.75□□□□□ -1.01
LINC01539-202ENST00000589293 POTEB3A0JP26 581 aa8.74□□□□□ -1.01
LINC01539-202ENST00000589293 TULP1O00294 542 aaPredicted RBP8.74□□□□□ -1.01
LINC01539-202ENST00000589293 ZMYND10O75800 440 aa8.74□□□□□ -1.01
LINC01539-202ENST00000589293 TYW1BQ6NUM6 668 aa8.74□□□□□ -1.01
LINC01539-202ENST00000589293 POTEBQ6S5H4 581 aa8.74□□□□□ -1.01
LINC01539-202ENST00000589293 GPIHBP1Q8IV16 184 aa8.74□□□□□ -1.01
LINC01539-202ENST00000589293 EID1Q9Y6B2 187 aa8.74□□□□□ -1.01
LINC01539-202ENST00000589293 ARHGEF5Q12774 1597 aa8.73□□□□□ -1.01
LINC01539-202ENST00000589293 ZDHHC16Q969W1 377 aa8.73□□□□□ -1.01
LINC01539-202ENST00000589293 FAM163AQ96GL9 167 aaPredicted RBP8.73□□□□□ -1.01
LINC01539-202ENST00000589293 FECHP22830 423 aa8.72□□□□□ -1.01
LINC01539-202ENST00000589293 PTGDRQ13258 359 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms