RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
TOMM40-204ENST00000589253 ORAI2Q96SN7 254 aa17.23■□□□□ 0.35
TOMM40-204ENST00000589253 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
TOMM40-204ENST00000589253 FNBP4Q8N3X1 1017 aaPredicted RBP17.21■□□□□ 0.35
TOMM40-204ENST00000589253 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
TOMM40-204ENST00000589253 COL22A1Q8NFW1 1626 aaPredicted RBP17.21■□□□□ 0.35
TOMM40-204ENST00000589253 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.34
TOMM40-204ENST00000589253 ACIN1Q9UKV3 1341 aaKnown RBP17.21■□□□□ 0.34
TOMM40-204ENST00000589253 ATRNO75882 1429 aa17.2■□□□□ 0.34
TOMM40-204ENST00000589253 CCDC125Q86Z20 511 aa17.19■□□□□ 0.34
TOMM40-204ENST00000589253 ESCO1Q5FWF5 840 aa17.18■□□□□ 0.34
TOMM40-204ENST00000589253 SRCAPQ6ZRS2 3230 aa17.18■□□□□ 0.34
TOMM40-204ENST00000589253 RPGRIP1LQ68CZ1 1315 aa17.18■□□□□ 0.34
TOMM40-204ENST00000589253 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
TOMM40-204ENST00000589253 LRPPRCP42704 1394 aaKnown RBP17.16■□□□□ 0.34
TOMM40-204ENST00000589253 CDC42BPGQ6DT37 1551 aa17.15■□□□□ 0.34
TOMM40-204ENST00000589253 MYOM2P54296 1465 aa17.15■□□□□ 0.34
TOMM40-204ENST00000589253 MARF1Q9Y4F3 1742 aaKnown RBP17.14■□□□□ 0.33
TOMM40-204ENST00000589253 DHX57Q6P158 1386 aaKnown RBP17.14■□□□□ 0.33
TOMM40-204ENST00000589253 ANKRD30BQ9BXX2 1392 aa17.14■□□□□ 0.33
TOMM40-204ENST00000589253 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
TOMM40-204ENST00000589253 PPLO60437 1756 aa17.12■□□□□ 0.33
TOMM40-204ENST00000589253 PXDNQ92626 1479 aa17.12■□□□□ 0.33
TOMM40-204ENST00000589253 EP400Q96L91 3159 aa17.12■□□□□ 0.33
TOMM40-204ENST00000589253 GJD4Q96KN9 370 aaPredicted RBP17.12■□□□□ 0.33
TOMM40-204ENST00000589253 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
TOMM40-204ENST00000589253 FOXO3O43524 673 aa17.11■□□□□ 0.33
TOMM40-204ENST00000589253 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
TOMM40-204ENST00000589253 SF3B2Q13435 895 aaKnown RBP17.09■□□□□ 0.33
TOMM40-204ENST00000589253 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
TOMM40-204ENST00000589253 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.09■□□□□ 0.33
TOMM40-204ENST00000589253 SPATA31E1Q6ZUB1 1445 aa17.08■□□□□ 0.32
TOMM40-204ENST00000589253 HAP1P54257 671 aaPredicted RBP17.08■□□□□ 0.32
TOMM40-204ENST00000589253 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
TOMM40-204ENST00000589253 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
TOMM40-204ENST00000589253 NUTM2FA1L443 756 aa17.06■□□□□ 0.32
TOMM40-204ENST00000589253 STK26Q9P289 416 aa17.06■□□□□ 0.32
TOMM40-204ENST00000589253 KIF1AQ12756 1690 aa17.05■□□□□ 0.32
TOMM40-204ENST00000589253 RALGAPBQ86X10 1494 aa17.05■□□□□ 0.32
TOMM40-204ENST00000589253 TECPR2O15040 1411 aa17.03■□□□□ 0.32
TOMM40-204ENST00000589253 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
TOMM40-204ENST00000589253 GLI3P10071 1580 aa17.02■□□□□ 0.32
TOMM40-204ENST00000589253 SPATA31A3Q5VYP0 1347 aa17.02■□□□□ 0.32
TOMM40-204ENST00000589253 SLIT2O94813 1529 aa17.02■□□□□ 0.32
TOMM40-204ENST00000589253 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
TOMM40-204ENST00000589253 CCDC9Q9Y3X0 531 aaKnown RBP17.02■□□□□ 0.32
TOMM40-204ENST00000589253 KNDC1Q76NI1 1749 aa17.01■□□□□ 0.31
TOMM40-204ENST00000589253 PSME1Q06323 249 aa17.01■□□□□ 0.31
TOMM40-204ENST00000589253 FMN2Q9NZ56 1722 aa17.01■□□□□ 0.31
TOMM40-204ENST00000589253 ADGRF5Q8IZF2 1346 aa17■□□□□ 0.31
TOMM40-204ENST00000589253 RGL3Q3MIN7 710 aa17■□□□□ 0.31
TOMM40-204ENST00000589253 KRT28Q7Z3Y7 464 aa17■□□□□ 0.31
TOMM40-204ENST00000589253 ABCC11Q96J66 1382 aa17■□□□□ 0.31
TOMM40-204ENST00000589253 TNS3Q68CZ2 1445 aa16.98■□□□□ 0.31
TOMM40-204ENST00000589253 A0A0G2JS52 829 aa16.98■□□□□ 0.31
TOMM40-204ENST00000589253 MYT1Q01538 1121 aa16.98■□□□□ 0.31
TOMM40-204ENST00000589253 DEFB132Q7Z7B7 95 aa16.98■□□□□ 0.31
TOMM40-204ENST00000589253 SEPT12Q8IYM1 358 aa16.98■□□□□ 0.31
TOMM40-204ENST00000589253 VPS72Q15906 364 aa16.97■□□□□ 0.31
TOMM40-204ENST00000589253 TMEM132EQ6IEE7 984 aa16.97■□□□□ 0.31
TOMM40-204ENST00000589253 LMOD2Q6P5Q4 547 aa16.97■□□□□ 0.31
TOMM40-204ENST00000589253 BRWD3Q6RI45 1802 aa16.97■□□□□ 0.31
TOMM40-204ENST00000589253 PLEKHH1Q9ULM0 1364 aa16.97■□□□□ 0.31
TOMM40-204ENST00000589253 PLEKHG5O94827 1062 aa16.96■□□□□ 0.31
TOMM40-204ENST00000589253 KRT27Q7Z3Y8 459 aa16.96■□□□□ 0.31
TOMM40-204ENST00000589253 PHF8Q9UPP1 1060 aa16.96■□□□□ 0.31
TOMM40-204ENST00000589253 NWD2Q9ULI1 1742 aa16.96■□□□□ 0.3
TOMM40-204ENST00000589253 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.3
TOMM40-204ENST00000589253 PLCH1Q4KWH8 1693 aa16.95■□□□□ 0.3
TOMM40-204ENST00000589253 ARHGEF10O15013 1369 aa16.95■□□□□ 0.3
TOMM40-204ENST00000589253 SIN3AQ96ST3 1273 aa16.95■□□□□ 0.3
TOMM40-204ENST00000589253 PIK3C2GO75747 1445 aa16.95■□□□□ 0.3
TOMM40-204ENST00000589253 BAG6P46379 1132 aa16.94■□□□□ 0.3
TOMM40-204ENST00000589253 LRP5O75197 1615 aa16.94■□□□□ 0.3
TOMM40-204ENST00000589253 CABLES1Q8TDN4 633 aa16.93■□□□□ 0.3
TOMM40-204ENST00000589253 SBNO1A3KN83 1393 aa16.92■□□□□ 0.3
TOMM40-204ENST00000589253 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
TOMM40-204ENST00000589253 NRXN1Q9ULB1 1477 aa16.92■□□□□ 0.3
TOMM40-204ENST00000589253 ABCA3Q99758 1704 aa16.9■□□□□ 0.3
TOMM40-204ENST00000589253 ONECUT3O60422 494 aaPredicted RBP16.9■□□□□ 0.3
TOMM40-204ENST00000589253 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.3
TOMM40-204ENST00000589253 PSDA5PKW4 1024 aaPredicted RBP16.87■□□□□ 0.29
TOMM40-204ENST00000589253 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
TOMM40-204ENST00000589253 FAM98CQ17RN3 349 aaKnown RBP16.87■□□□□ 0.29
TOMM40-204ENST00000589253 POGKQ9P215 609 aa16.87■□□□□ 0.29
TOMM40-204ENST00000589253 PRAM1Q96QH2 718 aa16.86■□□□□ 0.29
TOMM40-204ENST00000589253 C14orf93Q9H972 538 aaKnown RBP16.86■□□□□ 0.29
TOMM40-204ENST00000589253 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
TOMM40-204ENST00000589253 FAM83GA6ND36 823 aa16.85■□□□□ 0.29
TOMM40-204ENST00000589253 NEUROD1Q13562 356 aa16.85■□□□□ 0.29
TOMM40-204ENST00000589253 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
TOMM40-204ENST00000589253 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
TOMM40-204ENST00000589253 GPRASP1Q5JY77 1395 aa16.85■□□□□ 0.29
TOMM40-204ENST00000589253 RGPD1P0DJD0 1748 aa16.84■□□□□ 0.29
TOMM40-204ENST00000589253 KIAA1210Q9ULL0 1709 aa16.84■□□□□ 0.29
TOMM40-204ENST00000589253 EIF3AQ14152 1382 aaKnown RBP16.84■□□□□ 0.29
TOMM40-204ENST00000589253 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
TOMM40-204ENST00000589253 COL14A1Q05707 1796 aaKnown RBP16.84■□□□□ 0.29
TOMM40-204ENST00000589253 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
TOMM40-204ENST00000589253 CLSPNQ9HAW4 1339 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms