RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 RGPD8O14715 1765 aaPredicted RBP21.58■■□□□ 1.04
DNMT1-217ENST00000589091 HRCP23327 699 aa21.57■■□□□ 1.04
DNMT1-217ENST00000589091 PNPLA6Q8IY17 1366 aa21.57■■□□□ 1.04
DNMT1-217ENST00000589091 KIF1AQ12756 1690 aa21.56■■□□□ 1.04
DNMT1-217ENST00000589091 COL22A1Q8NFW1 1626 aaPredicted RBP21.56■■□□□ 1.04
DNMT1-217ENST00000589091 MARF1Q9Y4F3 1742 aaKnown RBP21.55■■□□□ 1.04
DNMT1-217ENST00000589091 STK26Q9P289 416 aa21.55■■□□□ 1.04
DNMT1-217ENST00000589091 NUTM2BA6NNL0 878 aaPredicted RBP21.54■■□□□ 1.04
DNMT1-217ENST00000589091 NUTM2EB1AL46 878 aaPredicted RBP21.54■■□□□ 1.04
DNMT1-217ENST00000589091 NUTM2AQ8IVF1 878 aaPredicted RBP21.54■■□□□ 1.04
DNMT1-217ENST00000589091 DDX17Q92841 729 aaKnown RBP21.54■■□□□ 1.04
DNMT1-217ENST00000589091 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
DNMT1-217ENST00000589091 C14orf93Q9H972 538 aaKnown RBP21.54■■□□□ 1.04
DNMT1-217ENST00000589091 SOS2Q07890 1332 aaPredicted RBP21.54■■□□□ 1.04
DNMT1-217ENST00000589091 DHX57Q6P158 1386 aaKnown RBP21.53■■□□□ 1.04
DNMT1-217ENST00000589091 TMEM132EQ6IEE7 984 aa21.53■■□□□ 1.04
DNMT1-217ENST00000589091 SIRT1Q96EB6 747 aa21.52■■□□□ 1.04
DNMT1-217ENST00000589091 DLC1Q96QB1 1528 aa21.5■■□□□ 1.03
DNMT1-217ENST00000589091 WAPLQ7Z5K2 1190 aa21.5■■□□□ 1.03
DNMT1-217ENST00000589091 NPHP3Q7Z494 1330 aa21.5■■□□□ 1.03
DNMT1-217ENST00000589091 PLEKHH1Q9ULM0 1364 aa21.48■■□□□ 1.03
DNMT1-217ENST00000589091 ESCO1Q5FWF5 840 aa21.48■■□□□ 1.03
DNMT1-217ENST00000589091 PXDNQ92626 1479 aa21.47■■□□□ 1.03
DNMT1-217ENST00000589091 CFAP70Q5T0N1 1121 aa21.47■■□□□ 1.03
DNMT1-217ENST00000589091 STAC3Q96MF2 364 aa21.47■■□□□ 1.03
DNMT1-217ENST00000589091 AFF2P51816 1311 aa21.47■■□□□ 1.03
DNMT1-217ENST00000589091 ADGRB1O14514 1584 aa21.46■■□□□ 1.03
DNMT1-217ENST00000589091 CDK12Q9NYV4 1490 aaPredicted RBP21.45■■□□□ 1.03
DNMT1-217ENST00000589091 ADGRB2O60241 1585 aa21.45■■□□□ 1.02
DNMT1-217ENST00000589091 C8orf37Q96NL8 207 aa21.43■■□□□ 1.02
DNMT1-217ENST00000589091 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
DNMT1-217ENST00000589091 RXRBP28702 533 aa21.42■■□□□ 1.02
DNMT1-217ENST00000589091 ARHGEF28Q8N1W1 1705 aaKnown RBP21.42■■□□□ 1.02
DNMT1-217ENST00000589091 NUTM2FA1L443 756 aa21.4■■□□□ 1.02
DNMT1-217ENST00000589091 FOXO3O43524 673 aa21.4■■□□□ 1.02
DNMT1-217ENST00000589091 DCAF11Q8TEB1 546 aa21.4■■□□□ 1.02
DNMT1-217ENST00000589091 USP32Q8NFA0 1604 aa21.4■■□□□ 1.02
DNMT1-217ENST00000589091 ITSN1Q15811 1721 aa21.39■■□□□ 1.01
DNMT1-217ENST00000589091 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.38■■□□□ 1.01
DNMT1-217ENST00000589091 ADAMTS2O95450 1211 aa21.38■■□□□ 1.01
DNMT1-217ENST00000589091 NGLY1Q96IV0 654 aa21.38■■□□□ 1.01
DNMT1-217ENST00000589091 PRAM1Q96QH2 718 aa21.38■■□□□ 1.01
DNMT1-217ENST00000589091 POGKQ9P215 609 aa21.37■■□□□ 1.01
DNMT1-217ENST00000589091 KDM2AQ9Y2K7 1162 aa21.37■■□□□ 1.01
DNMT1-217ENST00000589091 ANKARQ7Z5J8 1434 aa21.37■■□□□ 1.01
DNMT1-217ENST00000589091 ABCA3Q99758 1704 aa21.35■■□□□ 1.01
DNMT1-217ENST00000589091 QTRT2Q9H974 415 aaKnown RBP21.35■■□□□ 1.01
DNMT1-217ENST00000589091 EIF3AQ14152 1382 aaKnown RBP21.35■■□□□ 1.01
DNMT1-217ENST00000589091 RBM6P78332 1123 aaKnown RBP21.34■■□□□ 1.01
DNMT1-217ENST00000589091 XPCQ01831 940 aaPredicted RBP21.34■■□□□ 1.01
DNMT1-217ENST00000589091 SAFB2Q14151 953 aaKnown RBP eCLIP21.34■■□□□ 1.01
DNMT1-217ENST00000589091 PHF8Q9UPP1 1060 aa21.33■■□□□ 1.01
DNMT1-217ENST00000589091 SPATA31A3Q5VYP0 1347 aa21.32■■□□□ 1
DNMT1-217ENST00000589091 TRAK1Q9UPV9 953 aa21.32■■□□□ 1
DNMT1-217ENST00000589091 TRPM3Q9HCF6 1732 aaPredicted RBP21.32■■□□□ 1
DNMT1-217ENST00000589091 TNS3Q68CZ2 1445 aa21.31■■□□□ 1
DNMT1-217ENST00000589091 TULP4Q9NRJ4 1543 aa21.31■■□□□ 1
DNMT1-217ENST00000589091 PSME1Q06323 249 aa21.31■■□□□ 1
DNMT1-217ENST00000589091 KRT28Q7Z3Y7 464 aa21.31■■□□□ 1
DNMT1-217ENST00000589091 FNBP4Q8N3X1 1017 aaPredicted RBP21.31■■□□□ 1
DNMT1-217ENST00000589091 USP21Q9UK80 565 aa21.31■■□□□ 1
DNMT1-217ENST00000589091 RGS12O14924 1447 aa21.3■■□□□ 1
DNMT1-217ENST00000589091 TRPC5Q9UL62 973 aaPredicted RBP21.3■■□□□ 1
DNMT1-217ENST00000589091 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
DNMT1-217ENST00000589091 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
DNMT1-217ENST00000589091 ALS2Q96Q42 1657 aa21.28■■□□□ 1
DNMT1-217ENST00000589091 SBNO1A3KN83 1393 aa21.28■■□□□ 1
DNMT1-217ENST00000589091 ATRNO75882 1429 aa21.28■■□□□ 1
DNMT1-217ENST00000589091 MINK1Q8N4C8 1332 aaPredicted RBP21.26■□□□□ 0.99
DNMT1-217ENST00000589091 ARHGEF10O15013 1369 aa21.25■□□□□ 0.99
DNMT1-217ENST00000589091 UPF1Q92900 1129 aaKnown RBP eCLIP21.25■□□□□ 0.99
DNMT1-217ENST00000589091 HIRIP3Q9BW71 556 aaPredicted RBP21.24■□□□□ 0.99
DNMT1-217ENST00000589091 BCL9LQ86UU0 1499 aa21.24■□□□□ 0.99
DNMT1-217ENST00000589091 WASLO00401 505 aaPredicted RBP21.23■□□□□ 0.99
DNMT1-217ENST00000589091 TOPAZ1Q8N9V7 1692 aa21.23■□□□□ 0.99
DNMT1-217ENST00000589091 CRYBG1Q9Y4K1 1723 aa21.22■□□□□ 0.99
DNMT1-217ENST00000589091 SLIT2O94813 1529 aa21.22■□□□□ 0.99
DNMT1-217ENST00000589091 HAP1P54257 671 aaPredicted RBP21.21■□□□□ 0.99
DNMT1-217ENST00000589091 PMFBP1Q8TBY8 1022 aa21.21■□□□□ 0.99
DNMT1-217ENST00000589091 GPRASP1Q5JY77 1395 aa21.21■□□□□ 0.99
DNMT1-217ENST00000589091 ATP7BP35670 1465 aa21.2■□□□□ 0.98
DNMT1-217ENST00000589091 PRR36Q9H6K5 1346 aa21.19■□□□□ 0.98
DNMT1-217ENST00000589091 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
DNMT1-217ENST00000589091 BRWD3Q6RI45 1802 aa21.18■□□□□ 0.98
DNMT1-217ENST00000589091 LMOD2Q6P5Q4 547 aa21.17■□□□□ 0.98
DNMT1-217ENST00000589091 ATAD2Q6PL18 1390 aa21.17■□□□□ 0.98
DNMT1-217ENST00000589091 GLI3P10071 1580 aa21.17■□□□□ 0.98
DNMT1-217ENST00000589091 COL14A1Q05707 1796 aaKnown RBP21.17■□□□□ 0.98
DNMT1-217ENST00000589091 NRAPQ86VF7 1730 aa21.16■□□□□ 0.98
DNMT1-217ENST00000589091 TRPM1Q7Z4N2 1603 aa21.16■□□□□ 0.98
DNMT1-217ENST00000589091 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
DNMT1-217ENST00000589091 GJD4Q96KN9 370 aaPredicted RBP21.15■□□□□ 0.98
DNMT1-217ENST00000589091 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
DNMT1-217ENST00000589091 CABLES1Q8TDN4 633 aa21.13■□□□□ 0.97
DNMT1-217ENST00000589091 PHRF1Q9P1Y6 1649 aaKnown RBP21.13■□□□□ 0.97
DNMT1-217ENST00000589091 RALGAPBQ86X10 1494 aa21.13■□□□□ 0.97
DNMT1-217ENST00000589091 NUDT16Q96DE0 195 aaKnown RBP21.12■□□□□ 0.97
DNMT1-217ENST00000589091 NBPF1Q3BBV0 1214 aa21.1■□□□□ 0.97
DNMT1-217ENST00000589091 CDK19Q9BWU1 502 aa21.1■□□□□ 0.97
DNMT1-217ENST00000589091 PLEKHG5O94827 1062 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms