RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 COL16A1Q07092 1604 aaPredicted RBP30.21■■■□□ 2.43
MBD3-205ENST00000589064 SOCS7O14512 581 aa30.19■■■□□ 2.42
MBD3-205ENST00000589064 NUTM2FA1L443 756 aa30.18■■■□□ 2.42
MBD3-205ENST00000589064 LRRC59Q96AG4 307 aaKnown RBP30.17■■■□□ 2.42
MBD3-205ENST00000589064 ESCO1Q5FWF5 840 aa30.16■■■□□ 2.42
MBD3-205ENST00000589064 SPATA31A6Q5VVP1 1343 aa30.15■■■□□ 2.42
MBD3-205ENST00000589064 SAFB2Q14151 953 aaKnown RBP eCLIP30.15■■■□□ 2.42
MBD3-205ENST00000589064 PRAM1Q96QH2 718 aa30.15■■■□□ 2.42
MBD3-205ENST00000589064 TRAK1Q9UPV9 953 aa30.13■■■□□ 2.41
MBD3-205ENST00000589064 POGKQ9P215 609 aa30.12■■■□□ 2.41
MBD3-205ENST00000589064 NUTM2BA6NNL0 878 aaPredicted RBP30.11■■■□□ 2.41
MBD3-205ENST00000589064 NUTM2EB1AL46 878 aaPredicted RBP30.11■■■□□ 2.41
MBD3-205ENST00000589064 NUTM2AQ8IVF1 878 aaPredicted RBP30.11■■■□□ 2.41
MBD3-205ENST00000589064 MEX3CQ5U5Q3 659 aaKnown RBP30.08■■■□□ 2.41
MBD3-205ENST00000589064 CDC42BPGQ6DT37 1551 aa30.08■■■□□ 2.41
MBD3-205ENST00000589064 LAMC1P11047 1609 aa30.07■■■□□ 2.4
MBD3-205ENST00000589064 SOS2Q07890 1332 aaPredicted RBP30.07■■■□□ 2.4
MBD3-205ENST00000589064 KNDC1Q76NI1 1749 aa30.07■■■□□ 2.4
MBD3-205ENST00000589064 POTEAQ6S8J7 498 aa30.06■■■□□ 2.4
MBD3-205ENST00000589064 SIN3AQ96ST3 1273 aa30.06■■■□□ 2.4
MBD3-205ENST00000589064 ADGRB1O14514 1584 aa30.06■■■□□ 2.4
MBD3-205ENST00000589064 FOXO3O43524 673 aa30.06■■■□□ 2.4
MBD3-205ENST00000589064 LRP6O75581 1613 aa30.05■■■□□ 2.4
MBD3-205ENST00000589064 NHSL1Q5SYE7 1610 aa30.05■■■□□ 2.4
MBD3-205ENST00000589064 TRIM26Q12899 539 aaPredicted RBP30.04■■■□□ 2.4
MBD3-205ENST00000589064 PNPLA6Q8IY17 1366 aa30.02■■■□□ 2.4
MBD3-205ENST00000589064 XPCQ01831 940 aaPredicted RBP30.01■■■□□ 2.4
MBD3-205ENST00000589064 NEUROD1Q13562 356 aa30.01■■■□□ 2.4
MBD3-205ENST00000589064 NPHP3Q7Z494 1330 aa30.01■■■□□ 2.39
MBD3-205ENST00000589064 DLC1Q96QB1 1528 aa30.01■■■□□ 2.39
MBD3-205ENST00000589064 HIRIP3Q9BW71 556 aaPredicted RBP29.99■■■□□ 2.39
MBD3-205ENST00000589064 L3MBTL2Q969R5 705 aa29.99■■■□□ 2.39
MBD3-205ENST00000589064 MINK1Q8N4C8 1332 aaPredicted RBP29.99■■■□□ 2.39
MBD3-205ENST00000589064 SHPRHQ149N8 1683 aa29.98■■■□□ 2.39
MBD3-205ENST00000589064 NBPF1Q3BBV0 1214 aa29.96■■■□□ 2.39
MBD3-205ENST00000589064 PHF8Q9UPP1 1060 aa29.93■■■□□ 2.38
MBD3-205ENST00000589064 ZNF772Q68DY9 489 aaPredicted RBP29.92■■■□□ 2.38
MBD3-205ENST00000589064 ADAMTS2O95450 1211 aa29.91■■■□□ 2.38
MBD3-205ENST00000589064 KRT28Q7Z3Y7 464 aa29.91■■■□□ 2.38
MBD3-205ENST00000589064 FMN2Q9NZ56 1722 aa29.89■■■□□ 2.38
MBD3-205ENST00000589064 WASLO00401 505 aaPredicted RBP29.89■■■□□ 2.38
MBD3-205ENST00000589064 C8orf37Q96NL8 207 aa29.89■■■□□ 2.38
MBD3-205ENST00000589064 PXDNQ92626 1479 aa29.88■■■□□ 2.37
MBD3-205ENST00000589064 PMFBP1Q8TBY8 1022 aa29.87■■■□□ 2.37
MBD3-205ENST00000589064 AFF2P51816 1311 aa29.86■■■□□ 2.37
MBD3-205ENST00000589064 PSME1Q06323 249 aa29.84■■■□□ 2.37
MBD3-205ENST00000589064 NGLY1Q96IV0 654 aa29.84■■■□□ 2.37
MBD3-205ENST00000589064 PRR36Q9H6K5 1346 aa29.84■■■□□ 2.37
MBD3-205ENST00000589064 ANKARQ7Z5J8 1434 aa29.83■■■□□ 2.37
MBD3-205ENST00000589064 SPATA31A3Q5VYP0 1347 aa29.83■■■□□ 2.37
MBD3-205ENST00000589064 ADGRB2O60241 1585 aa29.8■■■□□ 2.36
MBD3-205ENST00000589064 EIF3AQ14152 1382 aaKnown RBP29.79■■■□□ 2.36
MBD3-205ENST00000589064 CDK19Q9BWU1 502 aa29.79■■■□□ 2.36
MBD3-205ENST00000589064 RXRBP28702 533 aa29.76■■■□□ 2.35
MBD3-205ENST00000589064 NUDT16Q96DE0 195 aaKnown RBP29.76■■■□□ 2.35
MBD3-205ENST00000589064 QTRT2Q9H974 415 aaKnown RBP29.76■■■□□ 2.35
MBD3-205ENST00000589064 KIAA1210Q9ULL0 1709 aa29.75■■■□□ 2.35
MBD3-205ENST00000589064 KIF1AQ12756 1690 aa29.75■■■□□ 2.35
MBD3-205ENST00000589064 LMOD2Q6P5Q4 547 aa29.75■■■□□ 2.35
MBD3-205ENST00000589064 PLEKHG5O94827 1062 aa29.74■■■□□ 2.35
MBD3-205ENST00000589064 RGPD8O14715 1765 aaPredicted RBP29.74■■■□□ 2.35
MBD3-205ENST00000589064 USP32Q8NFA0 1604 aa29.73■■■□□ 2.35
MBD3-205ENST00000589064 CENPJQ9HC77 1338 aaPredicted RBP29.73■■■□□ 2.35
MBD3-205ENST00000589064 NBPF8Q3BBV2 869 aa29.73■■■□□ 2.35
MBD3-205ENST00000589064 NGDNQ8NEJ9 315 aaKnown RBP29.73■■■□□ 2.35
MBD3-205ENST00000589064 TULP4Q9NRJ4 1543 aa29.72■■■□□ 2.35
MBD3-205ENST00000589064 ARHGEF28Q8N1W1 1705 aaKnown RBP29.72■■■□□ 2.35
MBD3-205ENST00000589064 SBNO1A3KN83 1393 aa29.72■■■□□ 2.35
MBD3-205ENST00000589064 USP21Q9UK80 565 aa29.71■■■□□ 2.35
MBD3-205ENST00000589064 FNBP4Q8N3X1 1017 aaPredicted RBP29.7■■■□□ 2.35
MBD3-205ENST00000589064 CABLES1Q8TDN4 633 aa29.7■■■□□ 2.35
MBD3-205ENST00000589064 COL22A1Q8NFW1 1626 aaPredicted RBP29.7■■■□□ 2.34
MBD3-205ENST00000589064 GPRASP1Q5JY77 1395 aa29.7■■■□□ 2.34
MBD3-205ENST00000589064 TNS3Q68CZ2 1445 aa29.69■■■□□ 2.34
MBD3-205ENST00000589064 ROCK2O75116 1388 aaKnown RBP29.67■■■□□ 2.34
MBD3-205ENST00000589064 HAP1P54257 671 aaPredicted RBP29.67■■■□□ 2.34
MBD3-205ENST00000589064 CCDC61Q9Y6R9 512 aa29.66■■■□□ 2.34
MBD3-205ENST00000589064 RBM6P78332 1123 aaKnown RBP29.65■■■□□ 2.34
MBD3-205ENST00000589064 ARHGEF10O15013 1369 aa29.64■■■□□ 2.34
MBD3-205ENST00000589064 TONSLQ96HA7 1378 aa29.64■■■□□ 2.34
MBD3-205ENST00000589064 SRPK2P78362 688 aaKnown RBP29.64■■■□□ 2.34
MBD3-205ENST00000589064 ATP7BP35670 1465 aa29.63■■■□□ 2.33
MBD3-205ENST00000589064 PAK3O75914 559 aaPredicted RBP29.63■■■□□ 2.33
MBD3-205ENST00000589064 CABP2Q9NPB3 220 aa29.63■■■□□ 2.33
MBD3-205ENST00000589064 TRPC5Q9UL62 973 aaPredicted RBP29.62■■■□□ 2.33
MBD3-205ENST00000589064 PLEKHG3A1L390 1219 aa29.6■■■□□ 2.33
MBD3-205ENST00000589064 ACEP12821 1306 aa29.59■■■□□ 2.33
MBD3-205ENST00000589064 TRPM1Q7Z4N2 1603 aa29.57■■■□□ 2.32
MBD3-205ENST00000589064 BCL9LQ86UU0 1499 aa29.56■■■□□ 2.32
MBD3-205ENST00000589064 CARD11Q9BXL7 1154 aa29.55■■■□□ 2.32
MBD3-205ENST00000589064 CDK12Q9NYV4 1490 aaPredicted RBP29.53■■■□□ 2.32
MBD3-205ENST00000589064 ATRNO75882 1429 aa29.53■■■□□ 2.32
MBD3-205ENST00000589064 POLR3AO14802 1390 aaPredicted RBP29.53■■■□□ 2.32
MBD3-205ENST00000589064 EVC2Q86UK5 1308 aa29.53■■■□□ 2.32
MBD3-205ENST00000589064 UNC5CLQ8IV45 518 aa29.53■■■□□ 2.32
MBD3-205ENST00000589064 PCGF6Q9BYE7 350 aa29.53■■■□□ 2.32
MBD3-205ENST00000589064 FAM83GA6ND36 823 aa29.52■■■□□ 2.32
MBD3-205ENST00000589064 CABP1Q9NZU7 370 aa29.52■■■□□ 2.32
MBD3-205ENST00000589064 PPIP5K1Q6PFW1 1433 aa29.5■■■□□ 2.31
MBD3-205ENST00000589064 NUTM2GQ5VZR2 741 aa29.49■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms