RNA–Protein interactions for RNA: ENST00000589006.1

SAFB-206, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 459 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-206ENST00000589006 ABCC11Q96J66 1382 aa28.33■■■□□ 2.13
SAFB-206ENST00000589006 TECPR2O15040 1411 aa28.33■■■□□ 2.13
SAFB-206ENST00000589006 ZNF772Q68DY9 489 aaPredicted RBP28.32■■■□□ 2.12
SAFB-206ENST00000589006 PTCH1Q13635 1447 aa28.32■■■□□ 2.12
SAFB-206ENST00000589006 AHDC1Q5TGY3 1603 aaPredicted RBP28.3■■■□□ 2.12
SAFB-206ENST00000589006 NCOA3Q9Y6Q9 1424 aa28.29■■■□□ 2.12
SAFB-206ENST00000589006 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.29■■■□□ 2.12
SAFB-206ENST00000589006 ROBO2Q9HCK4 1378 aa28.28■■■□□ 2.12
SAFB-206ENST00000589006 NBPF1Q3BBV0 1214 aa28.28■■■□□ 2.12
SAFB-206ENST00000589006 STK26Q9P289 416 aa28.27■■■□□ 2.12
SAFB-206ENST00000589006 SIRT1Q96EB6 747 aa28.26■■■□□ 2.11
SAFB-206ENST00000589006 DLC1Q96QB1 1528 aa28.25■■■□□ 2.11
SAFB-206ENST00000589006 C14orf37Q86TY3 774 aa28.24■■■□□ 2.11
SAFB-206ENST00000589006 RXRBP28702 533 aa28.22■■■□□ 2.11
SAFB-206ENST00000589006 RALGAPBQ86X10 1494 aa28.21■■■□□ 2.11
SAFB-206ENST00000589006 GPRASP1Q5JY77 1395 aa28.2■■■□□ 2.1
SAFB-206ENST00000589006 ARHGEF28Q8N1W1 1705 aaKnown RBP28.19■■■□□ 2.1
SAFB-206ENST00000589006 TRAK1Q9UPV9 953 aa28.19■■■□□ 2.1
SAFB-206ENST00000589006 SRCAPQ6ZRS2 3230 aa28.19■■■□□ 2.1
SAFB-206ENST00000589006 CDK12Q9NYV4 1490 aaPredicted RBP28.19■■■□□ 2.1
SAFB-206ENST00000589006 ROCK2O75116 1388 aaKnown RBP28.18■■■□□ 2.1
SAFB-206ENST00000589006 NALCNQ8IZF0 1738 aa28.18■■■□□ 2.1
SAFB-206ENST00000589006 NUTM2BA6NNL0 878 aaPredicted RBP28.17■■■□□ 2.1
SAFB-206ENST00000589006 NUTM2EB1AL46 878 aaPredicted RBP28.17■■■□□ 2.1
SAFB-206ENST00000589006 WAPLQ7Z5K2 1190 aa28.17■■■□□ 2.1
SAFB-206ENST00000589006 CADPS2Q86UW7 1296 aa28.17■■■□□ 2.1
SAFB-206ENST00000589006 NUTM2AQ8IVF1 878 aaPredicted RBP28.17■■■□□ 2.1
SAFB-206ENST00000589006 PLEKHH1Q9ULM0 1364 aa28.16■■■□□ 2.1
SAFB-206ENST00000589006 ADGRL3Q9HAR2 1447 aa28.16■■■□□ 2.1
SAFB-206ENST00000589006 ATF3P18847 181 aa28.15■■■□□ 2.1
SAFB-206ENST00000589006 C19orf44Q9H6X5 657 aa28.15■■■□□ 2.1
SAFB-206ENST00000589006 PRAM1Q96QH2 718 aa28.13■■■□□ 2.09
SAFB-206ENST00000589006 AFF2P51816 1311 aa28.13■■■□□ 2.09
SAFB-206ENST00000589006 BRINP3Q76B58 766 aa28.11■■■□□ 2.09
SAFB-206ENST00000589006 DCCP43146 1447 aa28.1■■■□□ 2.09
SAFB-206ENST00000589006 POGKQ9P215 609 aa28.09■■■□□ 2.09
SAFB-206ENST00000589006 RGS12O14924 1447 aa28.09■■■□□ 2.09
SAFB-206ENST00000589006 CARD11Q9BXL7 1154 aa28.08■■■□□ 2.09
SAFB-206ENST00000589006 NHSL1Q5SYE7 1610 aa28.07■■■□□ 2.08
SAFB-206ENST00000589006 CDC42BPGQ6DT37 1551 aa28.05■■■□□ 2.08
SAFB-206ENST00000589006 ADGRB2O60241 1585 aa28.03■■■□□ 2.08
SAFB-206ENST00000589006 SAFB2Q14151 953 aaKnown RBP eCLIP28.03■■■□□ 2.08
SAFB-206ENST00000589006 CENPJQ9HC77 1338 aaPredicted RBP28.01■■■□□ 2.07
SAFB-206ENST00000589006 QRICH2Q9H0J4 1663 aa28■■■□□ 2.07
SAFB-206ENST00000589006 EIF3AQ14152 1382 aaKnown RBP28■■■□□ 2.07
SAFB-206ENST00000589006 C8orf37Q96NL8 207 aa27.99■■■□□ 2.07
SAFB-206ENST00000589006 MST1RQ04912 1400 aa27.99■■■□□ 2.07
SAFB-206ENST00000589006 FMN2Q9NZ56 1722 aa27.98■■■□□ 2.07
SAFB-206ENST00000589006 RBM6P78332 1123 aaKnown RBP27.97■■■□□ 2.07
SAFB-206ENST00000589006 QTRT2Q9H974 415 aaKnown RBP27.97■■■□□ 2.07
SAFB-206ENST00000589006 MINK1Q8N4C8 1332 aaPredicted RBP27.96■■■□□ 2.07
SAFB-206ENST00000589006 HIRIP3Q9BW71 556 aaPredicted RBP27.94■■■□□ 2.06
SAFB-206ENST00000589006 PNPLA6Q8IY17 1366 aa27.94■■■□□ 2.06
SAFB-206ENST00000589006 DDX17Q92841 729 aaKnown RBP27.93■■■□□ 2.06
SAFB-206ENST00000589006 C1orf167Q5SNV9 1468 aa27.92■■■□□ 2.06
SAFB-206ENST00000589006 LRRC59Q96AG4 307 aaKnown RBP27.92■■■□□ 2.06
SAFB-206ENST00000589006 SBNO2Q9Y2G9 1366 aa27.91■■■□□ 2.06
SAFB-206ENST00000589006 WASLO00401 505 aaPredicted RBP27.91■■■□□ 2.06
SAFB-206ENST00000589006 USP47Q96K76 1375 aa27.9■■■□□ 2.06
SAFB-206ENST00000589006 RGPD8O14715 1765 aaPredicted RBP27.88■■■□□ 2.05
SAFB-206ENST00000589006 USP32Q8NFA0 1604 aa27.88■■■□□ 2.05
SAFB-206ENST00000589006 ST20-MTHFSA0A0A6YYL1 179 aa27.87■■■□□ 2.05
SAFB-206ENST00000589006 TULP4Q9NRJ4 1543 aa27.86■■■□□ 2.05
SAFB-206ENST00000589006 ATAD2Q6PL18 1390 aa27.86■■■□□ 2.05
SAFB-206ENST00000589006 ANKARQ7Z5J8 1434 aa27.85■■■□□ 2.05
SAFB-206ENST00000589006 ADAMTS2O95450 1211 aa27.85■■■□□ 2.05
SAFB-206ENST00000589006 CDK19Q9BWU1 502 aa27.85■■■□□ 2.05
SAFB-206ENST00000589006 EP400Q96L91 3159 aa27.85■■■□□ 2.05
SAFB-206ENST00000589006 NGLY1Q96IV0 654 aa27.84■■■□□ 2.05
SAFB-206ENST00000589006 TESK2Q96S53 571 aa27.83■■■□□ 2.05
SAFB-206ENST00000589006 NUTM2FA1L443 756 aa27.82■■■□□ 2.04
SAFB-206ENST00000589006 ORAI2Q96SN7 254 aa27.81■■■□□ 2.04
SAFB-206ENST00000589006 EVC2Q86UK5 1308 aa27.81■■■□□ 2.04
SAFB-206ENST00000589006 PRR36Q9H6K5 1346 aa27.81■■■□□ 2.04
SAFB-206ENST00000589006 ATP7BP35670 1465 aa27.79■■■□□ 2.04
SAFB-206ENST00000589006 SLC24A1O60721 1099 aa27.79■■■□□ 2.04
SAFB-206ENST00000589006 EIF4G2P78344 907 aaKnown RBP eCLIP27.78■■■□□ 2.04
SAFB-206ENST00000589006 ESCO1Q5FWF5 840 aa27.78■■■□□ 2.04
SAFB-206ENST00000589006 ITSN1Q15811 1721 aa27.78■■■□□ 2.04
SAFB-206ENST00000589006 NUDT16Q96DE0 195 aaKnown RBP27.77■■■□□ 2.04
SAFB-206ENST00000589006 KIF1AQ12756 1690 aa27.77■■■□□ 2.04
SAFB-206ENST00000589006 TOPAZ1Q8N9V7 1692 aa27.76■■■□□ 2.03
SAFB-206ENST00000589006 ZRANB1Q9UGI0 708 aa27.76■■■□□ 2.03
SAFB-206ENST00000589006 SRPK2P78362 688 aaKnown RBP27.75■■■□□ 2.03
SAFB-206ENST00000589006 CABP2Q9NPB3 220 aa27.75■■■□□ 2.03
SAFB-206ENST00000589006 USP21Q9UK80 565 aa27.75■■■□□ 2.03
SAFB-206ENST00000589006 HSPA5P11021 654 aaKnown RBP27.74■■■□□ 2.03
SAFB-206ENST00000589006 ZEB1P37275 1124 aaPredicted RBP27.74■■■□□ 2.03
SAFB-206ENST00000589006 PHF8Q9UPP1 1060 aa27.73■■■□□ 2.03
SAFB-206ENST00000589006 PUS7Q96PZ0 661 aaKnown RBP27.72■■■□□ 2.03
SAFB-206ENST00000589006 TRPC5Q9UL62 973 aaPredicted RBP27.72■■■□□ 2.03
SAFB-206ENST00000589006 CCDC61Q9Y6R9 512 aa27.72■■■□□ 2.03
SAFB-206ENST00000589006 ATRNO75882 1429 aa27.71■■■□□ 2.03
SAFB-206ENST00000589006 COL22A1Q8NFW1 1626 aaPredicted RBP27.68■■■□□ 2.02
SAFB-206ENST00000589006 TMF1P82094 1093 aa27.68■■■□□ 2.02
SAFB-206ENST00000589006 SOS2Q07890 1332 aaPredicted RBP27.67■■■□□ 2.02
SAFB-206ENST00000589006 PLEKHG3A1L390 1219 aa27.67■■■□□ 2.02
SAFB-206ENST00000589006 FNBP4Q8N3X1 1017 aaPredicted RBP27.67■■■□□ 2.02
SAFB-206ENST00000589006 NPHP3Q7Z494 1330 aa27.67■■■□□ 2.02
SAFB-206ENST00000589006 FOXO3O43524 673 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms