RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 ROBO2Q9HCK4 1378 aa27.74■■■□□ 2.03
CIRBP-220ENST00000588917 MSH6P52701 1360 aa27.73■■■□□ 2.03
CIRBP-220ENST00000588917 DLC1Q96QB1 1528 aa27.72■■■□□ 2.03
CIRBP-220ENST00000588917 WAPLQ7Z5K2 1190 aa27.72■■■□□ 2.03
CIRBP-220ENST00000588917 C19orf44Q9H6X5 657 aa27.72■■■□□ 2.03
CIRBP-220ENST00000588917 PRAM1Q96QH2 718 aa27.71■■■□□ 2.03
CIRBP-220ENST00000588917 SLAIN2Q9P270 581 aa27.71■■■□□ 2.03
CIRBP-220ENST00000588917 ZEB1P37275 1124 aaPredicted RBP27.7■■■□□ 2.02
CIRBP-220ENST00000588917 KNDC1Q76NI1 1749 aa27.7■■■□□ 2.02
CIRBP-220ENST00000588917 RGS17Q9UGC6 210 aaPredicted RBP27.68■■■□□ 2.02
CIRBP-220ENST00000588917 EIF3AQ14152 1382 aaKnown RBP27.68■■■□□ 2.02
CIRBP-220ENST00000588917 ROBO1Q9Y6N7 1651 aa27.65■■■□□ 2.02
CIRBP-220ENST00000588917 ATF3P18847 181 aa27.65■■■□□ 2.02
CIRBP-220ENST00000588917 CADPS2Q86UW7 1296 aa27.64■■■□□ 2.02
CIRBP-220ENST00000588917 CENPJQ9HC77 1338 aaPredicted RBP27.64■■■□□ 2.01
CIRBP-220ENST00000588917 ADGRL3Q9HAR2 1447 aa27.62■■■□□ 2.01
CIRBP-220ENST00000588917 SLC24A1O60721 1099 aa27.62■■■□□ 2.01
CIRBP-220ENST00000588917 SAFB2Q14151 953 aaKnown RBP eCLIP27.62■■■□□ 2.01
CIRBP-220ENST00000588917 PLEKHH1Q9ULM0 1364 aa27.61■■■□□ 2.01
CIRBP-220ENST00000588917 DCCP43146 1447 aa27.58■■■□□ 2.01
CIRBP-220ENST00000588917 ARHGEF28Q8N1W1 1705 aaKnown RBP27.55■■■□□ 2
CIRBP-220ENST00000588917 MINK1Q8N4C8 1332 aaPredicted RBP27.55■■■□□ 2
CIRBP-220ENST00000588917 JCADQ9P266 1359 aa27.53■■■□□ 2
CIRBP-220ENST00000588917 EIF4G2P78344 907 aaKnown RBP eCLIP27.53■■■□□ 2
CIRBP-220ENST00000588917 USP47Q96K76 1375 aa27.52■■■□□ 2
CIRBP-220ENST00000588917 ST20-MTHFSA0A0A6YYL1 179 aa27.52■■■□□ 2
CIRBP-220ENST00000588917 POTEAQ6S8J7 498 aa27.52■■■□□ 2
CIRBP-220ENST00000588917 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.51■■□□□ 1.99
CIRBP-220ENST00000588917 WASLO00401 505 aaPredicted RBP27.51■■□□□ 1.99
CIRBP-220ENST00000588917 HIRIP3Q9BW71 556 aaPredicted RBP27.51■■□□□ 1.99
CIRBP-220ENST00000588917 NALCNQ8IZF0 1738 aa27.49■■□□□ 1.99
CIRBP-220ENST00000588917 SBNO2Q9Y2G9 1366 aa27.48■■□□□ 1.99
CIRBP-220ENST00000588917 EVC2Q86UK5 1308 aa27.48■■□□□ 1.99
CIRBP-220ENST00000588917 PHLPP1O60346 1717 aa27.48■■□□□ 1.99
CIRBP-220ENST00000588917 CDC42BPGQ6DT37 1551 aa27.47■■□□□ 1.99
CIRBP-220ENST00000588917 CDK19Q9BWU1 502 aa27.46■■□□□ 1.99
CIRBP-220ENST00000588917 ADGRB2O60241 1585 aa27.44■■□□□ 1.98
CIRBP-220ENST00000588917 SRPK2P78362 688 aaKnown RBP27.42■■□□□ 1.98
CIRBP-220ENST00000588917 QRICH2Q9H0J4 1663 aa27.42■■□□□ 1.98
CIRBP-220ENST00000588917 SPATA31A6Q5VVP1 1343 aa27.41■■□□□ 1.98
CIRBP-220ENST00000588917 MST1RQ04912 1400 aa27.41■■□□□ 1.98
CIRBP-220ENST00000588917 TESK2Q96S53 571 aa27.41■■□□□ 1.98
CIRBP-220ENST00000588917 COL16A1Q07092 1604 aaPredicted RBP27.41■■□□□ 1.98
CIRBP-220ENST00000588917 HSPA5P11021 654 aaKnown RBP27.4■■□□□ 1.98
CIRBP-220ENST00000588917 TMF1P82094 1093 aa27.4■■□□□ 1.98
CIRBP-220ENST00000588917 PUS7Q96PZ0 661 aaKnown RBP27.4■■□□□ 1.98
CIRBP-220ENST00000588917 C1orf167Q5SNV9 1468 aa27.39■■□□□ 1.98
CIRBP-220ENST00000588917 NUTM2FA1L443 756 aa27.39■■□□□ 1.98
CIRBP-220ENST00000588917 BRINP3Q76B58 766 aa27.39■■□□□ 1.98
CIRBP-220ENST00000588917 CDCA8Q53HL2 280 aa27.38■■□□□ 1.97
CIRBP-220ENST00000588917 ESCO1Q5FWF5 840 aa27.38■■□□□ 1.97
CIRBP-220ENST00000588917 ANKARQ7Z5J8 1434 aa27.38■■□□□ 1.97
CIRBP-220ENST00000588917 NUDT16Q96DE0 195 aaKnown RBP27.37■■□□□ 1.97
CIRBP-220ENST00000588917 CCDC61Q9Y6R9 512 aa27.36■■□□□ 1.97
CIRBP-220ENST00000588917 AHDC1Q5TGY3 1603 aaPredicted RBP27.36■■□□□ 1.97
CIRBP-220ENST00000588917 MEX3CQ5U5Q3 659 aaKnown RBP27.35■■□□□ 1.97
CIRBP-220ENST00000588917 CABP2Q9NPB3 220 aa27.35■■□□□ 1.97
CIRBP-220ENST00000588917 FMN2Q9NZ56 1722 aa27.35■■□□□ 1.97
CIRBP-220ENST00000588917 TULP4Q9NRJ4 1543 aa27.34■■□□□ 1.97
CIRBP-220ENST00000588917 ORAI2Q96SN7 254 aa27.33■■□□□ 1.97
CIRBP-220ENST00000588917 PHF8Q9UPP1 1060 aa27.31■■□□□ 1.96
CIRBP-220ENST00000588917 LRP6O75581 1613 aa27.3■■□□□ 1.96
CIRBP-220ENST00000588917 ZNF772Q68DY9 489 aaPredicted RBP27.3■■□□□ 1.96
CIRBP-220ENST00000588917 ATAD2Q6PL18 1390 aa27.3■■□□□ 1.96
CIRBP-220ENST00000588917 PRR36Q9H6K5 1346 aa27.29■■□□□ 1.96
CIRBP-220ENST00000588917 PLEKHG3A1L390 1219 aa27.27■■□□□ 1.96
CIRBP-220ENST00000588917 NPHP3Q7Z494 1330 aa27.25■■□□□ 1.95
CIRBP-220ENST00000588917 ATP7BP35670 1465 aa27.25■■□□□ 1.95
CIRBP-220ENST00000588917 SHPRHQ149N8 1683 aa27.24■■□□□ 1.95
CIRBP-220ENST00000588917 NUTM2BA6NNL0 878 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-220ENST00000588917 NUTM2EB1AL46 878 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-220ENST00000588917 NUTM2AQ8IVF1 878 aaPredicted RBP27.24■■□□□ 1.95
CIRBP-220ENST00000588917 NGDNQ8NEJ9 315 aaKnown RBP27.24■■□□□ 1.95
CIRBP-220ENST00000588917 PMFBP1Q8TBY8 1022 aa27.24■■□□□ 1.95
CIRBP-220ENST00000588917 LRRC59Q96AG4 307 aaKnown RBP27.24■■□□□ 1.95
CIRBP-220ENST00000588917 FOXO3O43524 673 aa27.23■■□□□ 1.95
CIRBP-220ENST00000588917 CABP1Q9NZU7 370 aa27.23■■□□□ 1.95
CIRBP-220ENST00000588917 PSME1Q06323 249 aa27.22■■□□□ 1.95
CIRBP-220ENST00000588917 USP32Q8NFA0 1604 aa27.22■■□□□ 1.95
CIRBP-220ENST00000588917 PPIP5K1Q6PFW1 1433 aa27.21■■□□□ 1.95
CIRBP-220ENST00000588917 TMC1Q8TDI8 760 aa27.2■■□□□ 1.94
CIRBP-220ENST00000588917 ZNF692Q9BU19 519 aaPredicted RBP27.2■■□□□ 1.94
CIRBP-220ENST00000588917 KIF1AQ12756 1690 aa27.19■■□□□ 1.94
CIRBP-220ENST00000588917 NINLQ9Y2I6 1382 aa27.19■■□□□ 1.94
CIRBP-220ENST00000588917 ITSN1Q15811 1721 aa27.19■■□□□ 1.94
CIRBP-220ENST00000588917 ACEP12821 1306 aa27.17■■□□□ 1.94
CIRBP-220ENST00000588917 KRT28Q7Z3Y7 464 aa27.17■■□□□ 1.94
CIRBP-220ENST00000588917 DDX17Q92841 729 aaKnown RBP27.17■■□□□ 1.94
CIRBP-220ENST00000588917 RGPD8O14715 1765 aaPredicted RBP27.17■■□□□ 1.94
CIRBP-220ENST00000588917 RXRBP28702 533 aa27.16■■□□□ 1.94
CIRBP-220ENST00000588917 TERF2IPQ9NYB0 399 aa27.16■■□□□ 1.94
CIRBP-220ENST00000588917 SOS2Q07890 1332 aaPredicted RBP27.16■■□□□ 1.94
CIRBP-220ENST00000588917 POLR3AO14802 1390 aaPredicted RBP27.15■■□□□ 1.94
CIRBP-220ENST00000588917 HDGFL2Q7Z4V5 671 aaPredicted RBP27.14■■□□□ 1.94
CIRBP-220ENST00000588917 SLC12A5Q9H2X9 1139 aa27.14■■□□□ 1.94
CIRBP-220ENST00000588917 NHSL1Q5SYE7 1610 aa27.13■■□□□ 1.93
CIRBP-220ENST00000588917 POLR3GLQ9BT43 218 aa27.13■■□□□ 1.93
CIRBP-220ENST00000588917 AFF2P51816 1311 aa27.12■■□□□ 1.93
CIRBP-220ENST00000588917 TOPAZ1Q8N9V7 1692 aa27.11■■□□□ 1.93
CIRBP-220ENST00000588917 BRD4O60885 1362 aaPredicted RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms