RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 HSPA1LP34931 641 aa25.21■■□□□ 1.63
DNMT1-215ENST00000588913 TONSLQ96HA7 1378 aa25.2■■□□□ 1.63
DNMT1-215ENST00000588913 SAFB2Q14151 953 aaKnown RBP eCLIP25.19■■□□□ 1.62
DNMT1-215ENST00000588913 PRAM1Q96QH2 718 aa25.19■■□□□ 1.62
DNMT1-215ENST00000588913 ATF3P18847 181 aa25.18■■□□□ 1.62
DNMT1-215ENST00000588913 CDC42BPGQ6DT37 1551 aa25.17■■□□□ 1.62
DNMT1-215ENST00000588913 CADPS2Q86UW7 1296 aa25.17■■□□□ 1.62
DNMT1-215ENST00000588913 SIRT1Q96EB6 747 aa25.16■■□□□ 1.62
DNMT1-215ENST00000588913 CCER1Q8TC90 406 aaPredicted RBP25.16■■□□□ 1.62
DNMT1-215ENST00000588913 FMN2Q9NZ56 1722 aa25.14■■□□□ 1.61
DNMT1-215ENST00000588913 C1orf167Q5SNV9 1468 aa25.12■■□□□ 1.61
DNMT1-215ENST00000588913 RGPD8O14715 1765 aaPredicted RBP25.11■■□□□ 1.61
DNMT1-215ENST00000588913 BRINP3Q76B58 766 aa25.1■■□□□ 1.61
DNMT1-215ENST00000588913 CLSPNQ9HAW4 1339 aa25.1■■□□□ 1.61
DNMT1-215ENST00000588913 ADGRB2O60241 1585 aa25.1■■□□□ 1.61
DNMT1-215ENST00000588913 NUTM2FA1L443 756 aa25.09■■□□□ 1.61
DNMT1-215ENST00000588913 HIRIP3Q9BW71 556 aaPredicted RBP25.09■■□□□ 1.61
DNMT1-215ENST00000588913 POGKQ9P215 609 aa25.09■■□□□ 1.61
DNMT1-215ENST00000588913 USP32Q8NFA0 1604 aa25.09■■□□□ 1.61
DNMT1-215ENST00000588913 MINK1Q8N4C8 1332 aaPredicted RBP25.08■■□□□ 1.6
DNMT1-215ENST00000588913 ORAI2Q96SN7 254 aa25.08■■□□□ 1.6
DNMT1-215ENST00000588913 PHLPP1O60346 1717 aa25.08■■□□□ 1.6
DNMT1-215ENST00000588913 RALGAPBQ86X10 1494 aa25.07■■□□□ 1.6
DNMT1-215ENST00000588913 DDX17Q92841 729 aaKnown RBP25.07■■□□□ 1.6
DNMT1-215ENST00000588913 ROCK2O75116 1388 aaKnown RBP25.06■■□□□ 1.6
DNMT1-215ENST00000588913 COL16A1Q07092 1604 aaPredicted RBP25.06■■□□□ 1.6
DNMT1-215ENST00000588913 NHSL1Q5SYE7 1610 aa25.06■■□□□ 1.6
DNMT1-215ENST00000588913 GPRASP1Q5JY77 1395 aa25.06■■□□□ 1.6
DNMT1-215ENST00000588913 PELP1Q8IZL8 1130 aaKnown RBP25.05■■□□□ 1.6
DNMT1-215ENST00000588913 AHDC1Q5TGY3 1603 aaPredicted RBP25.05■■□□□ 1.6
DNMT1-215ENST00000588913 QRICH2Q9H0J4 1663 aa25.04■■□□□ 1.6
DNMT1-215ENST00000588913 PRR36Q9H6K5 1346 aa24.99■■□□□ 1.59
DNMT1-215ENST00000588913 CENPJQ9HC77 1338 aaPredicted RBP24.97■■□□□ 1.59
DNMT1-215ENST00000588913 WASLO00401 505 aaPredicted RBP24.95■■□□□ 1.59
DNMT1-215ENST00000588913 ESCO1Q5FWF5 840 aa24.95■■□□□ 1.59
DNMT1-215ENST00000588913 TULP4Q9NRJ4 1543 aa24.95■■□□□ 1.59
DNMT1-215ENST00000588913 CARD11Q9BXL7 1154 aa24.95■■□□□ 1.58
DNMT1-215ENST00000588913 ATP7BP35670 1465 aa24.93■■□□□ 1.58
DNMT1-215ENST00000588913 TIMELESSQ9UNS1 1208 aa24.92■■□□□ 1.58
DNMT1-215ENST00000588913 CDK19Q9BWU1 502 aa24.9■■□□□ 1.58
DNMT1-215ENST00000588913 KIF1AQ12756 1690 aa24.9■■□□□ 1.58
DNMT1-215ENST00000588913 PXDNQ92626 1479 aa24.9■■□□□ 1.58
DNMT1-215ENST00000588913 ANKARQ7Z5J8 1434 aa24.9■■□□□ 1.58
DNMT1-215ENST00000588913 XPCQ01831 940 aaPredicted RBP24.9■■□□□ 1.58
DNMT1-215ENST00000588913 TOPAZ1Q8N9V7 1692 aa24.89■■□□□ 1.58
DNMT1-215ENST00000588913 FOXO3O43524 673 aa24.88■■□□□ 1.57
DNMT1-215ENST00000588913 MED1Q15648 1581 aaPredicted RBP24.87■■□□□ 1.57
DNMT1-215ENST00000588913 SOS2Q07890 1332 aaPredicted RBP24.87■■□□□ 1.57
DNMT1-215ENST00000588913 PMFBP1Q8TBY8 1022 aa24.87■■□□□ 1.57
DNMT1-215ENST00000588913 SHPRHQ149N8 1683 aa24.87■■□□□ 1.57
DNMT1-215ENST00000588913 PHF8Q9UPP1 1060 aa24.86■■□□□ 1.57
DNMT1-215ENST00000588913 NUDT16Q96DE0 195 aaKnown RBP24.85■■□□□ 1.57
DNMT1-215ENST00000588913 CABP2Q9NPB3 220 aa24.85■■□□□ 1.57
DNMT1-215ENST00000588913 ITSN1Q15811 1721 aa24.84■■□□□ 1.57
DNMT1-215ENST00000588913 EIF3AQ14152 1382 aaKnown RBP24.83■■□□□ 1.57
DNMT1-215ENST00000588913 JCADQ9P266 1359 aa24.83■■□□□ 1.57
DNMT1-215ENST00000588913 LRP6O75581 1613 aa24.82■■□□□ 1.56
DNMT1-215ENST00000588913 NPHP3Q7Z494 1330 aa24.8■■□□□ 1.56
DNMT1-215ENST00000588913 TRPM3Q9HCF6 1732 aaPredicted RBP24.8■■□□□ 1.56
DNMT1-215ENST00000588913 PNPLA6Q8IY17 1366 aa24.8■■□□□ 1.56
DNMT1-215ENST00000588913 ST20-MTHFSA0A0A6YYL1 179 aa24.8■■□□□ 1.56
DNMT1-215ENST00000588913 USP47Q96K76 1375 aa24.79■■□□□ 1.56
DNMT1-215ENST00000588913 TESK2Q96S53 571 aa24.79■■□□□ 1.56
DNMT1-215ENST00000588913 SRPK2P78362 688 aaKnown RBP24.78■■□□□ 1.56
DNMT1-215ENST00000588913 SBNO2Q9Y2G9 1366 aa24.78■■□□□ 1.56
DNMT1-215ENST00000588913 DIEXFQ68CQ4 756 aaKnown RBP24.77■■□□□ 1.56
DNMT1-215ENST00000588913 KRT28Q7Z3Y7 464 aa24.76■■□□□ 1.55
DNMT1-215ENST00000588913 LRRC59Q96AG4 307 aaKnown RBP24.76■■□□□ 1.55
DNMT1-215ENST00000588913 PPIP5K1Q6PFW1 1433 aa24.74■■□□□ 1.55
DNMT1-215ENST00000588913 COL22A1Q8NFW1 1626 aaPredicted RBP24.74■■□□□ 1.55
DNMT1-215ENST00000588913 CENPBP07199 599 aaPredicted RBP24.74■■□□□ 1.55
DNMT1-215ENST00000588913 EVC2Q86UK5 1308 aa24.74■■□□□ 1.55
DNMT1-215ENST00000588913 CCDC61Q9Y6R9 512 aa24.73■■□□□ 1.55
DNMT1-215ENST00000588913 ALS2Q96Q42 1657 aa24.72■■□□□ 1.55
DNMT1-215ENST00000588913 SPATA31A3Q5VYP0 1347 aa24.72■■□□□ 1.55
DNMT1-215ENST00000588913 POLR3AO14802 1390 aaPredicted RBP24.71■■□□□ 1.55
DNMT1-215ENST00000588913 ACEP12821 1306 aa24.71■■□□□ 1.55
DNMT1-215ENST00000588913 PLEKHG3A1L390 1219 aa24.7■■□□□ 1.55
DNMT1-215ENST00000588913 DISP3Q9P2K9 1392 aa24.7■■□□□ 1.54
DNMT1-215ENST00000588913 NUTM2BA6NNL0 878 aaPredicted RBP24.7■■□□□ 1.54
DNMT1-215ENST00000588913 NUTM2EB1AL46 878 aaPredicted RBP24.7■■□□□ 1.54
DNMT1-215ENST00000588913 NUTM2AQ8IVF1 878 aaPredicted RBP24.7■■□□□ 1.54
DNMT1-215ENST00000588913 NGDNQ8NEJ9 315 aaKnown RBP24.7■■□□□ 1.54
DNMT1-215ENST00000588913 CABP1Q9NZU7 370 aa24.7■■□□□ 1.54
DNMT1-215ENST00000588913 TNS3Q68CZ2 1445 aa24.69■■□□□ 1.54
DNMT1-215ENST00000588913 PSME1Q06323 249 aa24.69■■□□□ 1.54
DNMT1-215ENST00000588913 SPATA31A6Q5VVP1 1343 aa24.68■■□□□ 1.54
DNMT1-215ENST00000588913 ABCA3Q99758 1704 aa24.67■■□□□ 1.54
DNMT1-215ENST00000588913 SBNO1A3KN83 1393 aa24.66■■□□□ 1.54
DNMT1-215ENST00000588913 RGS17Q9UGC6 210 aaPredicted RBP24.66■■□□□ 1.54
DNMT1-215ENST00000588913 AKAP12Q02952 1782 aa24.66■■□□□ 1.54
DNMT1-215ENST00000588913 ZNF316A6NFI3 1004 aaPredicted RBP24.65■■□□□ 1.54
DNMT1-215ENST00000588913 CRYBG1Q9Y4K1 1723 aa24.64■■□□□ 1.54
DNMT1-215ENST00000588913 CD163L1Q9NR16 1453 aa24.64■■□□□ 1.53
DNMT1-215ENST00000588913 PLEKHG5O94827 1062 aa24.63■■□□□ 1.53
DNMT1-215ENST00000588913 CABLES1Q8TDN4 633 aa24.63■■□□□ 1.53
DNMT1-215ENST00000588913 HSPA5P11021 654 aaKnown RBP24.61■■□□□ 1.53
DNMT1-215ENST00000588913 ATAD2Q6PL18 1390 aa24.6■■□□□ 1.53
DNMT1-215ENST00000588913 LMOD2Q6P5Q4 547 aa24.6■■□□□ 1.53
DNMT1-215ENST00000588913 NRKQ7Z2Y5 1582 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms