RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 ADGRB1O14514 1584 aa28.2■■■□□ 2.11
CCDC130-209ENST00000588809 WAPLQ7Z5K2 1190 aa28.19■■■□□ 2.1
CCDC130-209ENST00000588809 SIRT1Q96EB6 747 aa28.19■■■□□ 2.1
CCDC130-209ENST00000588809 PLEKHH1Q9ULM0 1364 aa28.19■■■□□ 2.1
CCDC130-209ENST00000588809 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
CCDC130-209ENST00000588809 CFAP70Q5T0N1 1121 aa28.18■■■□□ 2.1
CCDC130-209ENST00000588809 DHX57Q6P158 1386 aaKnown RBP28.18■■■□□ 2.1
CCDC130-209ENST00000588809 RGPD8O14715 1765 aaPredicted RBP28.17■■■□□ 2.1
CCDC130-209ENST00000588809 LRRC59Q96AG4 307 aaKnown RBP28.17■■■□□ 2.1
CCDC130-209ENST00000588809 DDX17Q92841 729 aaKnown RBP28.16■■■□□ 2.1
CCDC130-209ENST00000588809 STAC3Q96MF2 364 aa28.16■■■□□ 2.1
CCDC130-209ENST00000588809 ORAI2Q96SN7 254 aa28.16■■■□□ 2.1
CCDC130-209ENST00000588809 SOS2Q07890 1332 aaPredicted RBP28.14■■■□□ 2.09
CCDC130-209ENST00000588809 KIF1AQ12756 1690 aa28.13■■■□□ 2.09
CCDC130-209ENST00000588809 PNPLA6Q8IY17 1366 aa28.13■■■□□ 2.09
CCDC130-209ENST00000588809 COL22A1Q8NFW1 1626 aaPredicted RBP28.13■■■□□ 2.09
CCDC130-209ENST00000588809 POTEAQ6S8J7 498 aa28.12■■■□□ 2.09
CCDC130-209ENST00000588809 DCAF11Q8TEB1 546 aa28.11■■■□□ 2.09
CCDC130-209ENST00000588809 ADGRB2O60241 1585 aa28.11■■■□□ 2.09
CCDC130-209ENST00000588809 KIAA1210Q9ULL0 1709 aa28.1■■■□□ 2.09
CCDC130-209ENST00000588809 PXDNQ92626 1479 aa28.09■■■□□ 2.09
CCDC130-209ENST00000588809 ARHGEF28Q8N1W1 1705 aaKnown RBP28.07■■■□□ 2.08
CCDC130-209ENST00000588809 ESCO1Q5FWF5 840 aa28.06■■■□□ 2.08
CCDC130-209ENST00000588809 MEX3CQ5U5Q3 659 aaKnown RBP28.06■■■□□ 2.08
CCDC130-209ENST00000588809 NPHP3Q7Z494 1330 aa28.06■■■□□ 2.08
CCDC130-209ENST00000588809 KDM2AQ9Y2K7 1162 aa28.05■■■□□ 2.08
CCDC130-209ENST00000588809 MARF1Q9Y4F3 1742 aaKnown RBP28.04■■■□□ 2.08
CCDC130-209ENST00000588809 USP32Q8NFA0 1604 aa28.03■■■□□ 2.08
CCDC130-209ENST00000588809 PRAM1Q96QH2 718 aa28.03■■■□□ 2.08
CCDC130-209ENST00000588809 NUTM2BA6NNL0 878 aaPredicted RBP28.02■■■□□ 2.08
CCDC130-209ENST00000588809 NUTM2EB1AL46 878 aaPredicted RBP28.02■■■□□ 2.08
CCDC130-209ENST00000588809 NUTM2AQ8IVF1 878 aaPredicted RBP28.02■■■□□ 2.08
CCDC130-209ENST00000588809 ZNF772Q68DY9 489 aaPredicted RBP28.01■■■□□ 2.07
CCDC130-209ENST00000588809 NUTM2FA1L443 756 aa27.99■■■□□ 2.07
CCDC130-209ENST00000588809 FOXO3O43524 673 aa27.98■■■□□ 2.07
CCDC130-209ENST00000588809 ANKARQ7Z5J8 1434 aa27.96■■■□□ 2.07
CCDC130-209ENST00000588809 POGKQ9P215 609 aa27.96■■■□□ 2.07
CCDC130-209ENST00000588809 SAFB2Q14151 953 aaKnown RBP eCLIP27.95■■■□□ 2.06
CCDC130-209ENST00000588809 TRAK1Q9UPV9 953 aa27.95■■■□□ 2.06
CCDC130-209ENST00000588809 AFF2P51816 1311 aa27.93■■■□□ 2.06
CCDC130-209ENST00000588809 ITSN1Q15811 1721 aa27.92■■■□□ 2.06
CCDC130-209ENST00000588809 TULP4Q9NRJ4 1543 aa27.91■■■□□ 2.06
CCDC130-209ENST00000588809 XPCQ01831 940 aaPredicted RBP27.9■■■□□ 2.06
CCDC130-209ENST00000588809 PHF8Q9UPP1 1060 aa27.89■■■□□ 2.06
CCDC130-209ENST00000588809 CDK12Q9NYV4 1490 aaPredicted RBP27.89■■■□□ 2.05
CCDC130-209ENST00000588809 EIF3AQ14152 1382 aaKnown RBP27.88■■■□□ 2.05
CCDC130-209ENST00000588809 C8orf37Q96NL8 207 aa27.88■■■□□ 2.05
CCDC130-209ENST00000588809 ABCA3Q99758 1704 aa27.87■■■□□ 2.05
CCDC130-209ENST00000588809 TRPM3Q9HCF6 1732 aaPredicted RBP27.87■■■□□ 2.05
CCDC130-209ENST00000588809 SPATA31A3Q5VYP0 1347 aa27.87■■■□□ 2.05
CCDC130-209ENST00000588809 ADAMTS2O95450 1211 aa27.85■■■□□ 2.05
CCDC130-209ENST00000588809 MINK1Q8N4C8 1332 aaPredicted RBP27.85■■■□□ 2.05
CCDC130-209ENST00000588809 TNS3Q68CZ2 1445 aa27.84■■■□□ 2.05
CCDC130-209ENST00000588809 HIRIP3Q9BW71 556 aaPredicted RBP27.84■■■□□ 2.05
CCDC130-209ENST00000588809 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
CCDC130-209ENST00000588809 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.83■■■□□ 2.05
CCDC130-209ENST00000588809 TRPM1Q7Z4N2 1603 aa27.82■■■□□ 2.04
CCDC130-209ENST00000588809 TOPAZ1Q8N9V7 1692 aa27.82■■■□□ 2.04
CCDC130-209ENST00000588809 ALS2Q96Q42 1657 aa27.82■■■□□ 2.04
CCDC130-209ENST00000588809 WASLO00401 505 aaPredicted RBP27.82■■■□□ 2.04
CCDC130-209ENST00000588809 RXRBP28702 533 aa27.82■■■□□ 2.04
CCDC130-209ENST00000588809 NGLY1Q96IV0 654 aa27.82■■■□□ 2.04
CCDC130-209ENST00000588809 SBNO1A3KN83 1393 aa27.82■■■□□ 2.04
CCDC130-209ENST00000588809 PRR36Q9H6K5 1346 aa27.81■■■□□ 2.04
CCDC130-209ENST00000588809 FNBP4Q8N3X1 1017 aaPredicted RBP27.8■■■□□ 2.04
CCDC130-209ENST00000588809 ATP7BP35670 1465 aa27.8■■■□□ 2.04
CCDC130-209ENST00000588809 PSME1Q06323 249 aa27.79■■■□□ 2.04
CCDC130-209ENST00000588809 QRICH2Q9H0J4 1663 aa27.78■■■□□ 2.04
CCDC130-209ENST00000588809 NBPF1Q3BBV0 1214 aa27.77■■■□□ 2.04
CCDC130-209ENST00000588809 L3MBTL2Q969R5 705 aa27.77■■■□□ 2.04
CCDC130-209ENST00000588809 QTRT2Q9H974 415 aaKnown RBP27.77■■■□□ 2.04
CCDC130-209ENST00000588809 RBM6P78332 1123 aaKnown RBP27.75■■■□□ 2.03
CCDC130-209ENST00000588809 PMFBP1Q8TBY8 1022 aa27.75■■■□□ 2.03
CCDC130-209ENST00000588809 SIN3AQ96ST3 1273 aa27.75■■■□□ 2.03
CCDC130-209ENST00000588809 CRYBG1Q9Y4K1 1723 aa27.75■■■□□ 2.03
CCDC130-209ENST00000588809 ARHGEF10O15013 1369 aa27.74■■■□□ 2.03
CCDC130-209ENST00000588809 USP21Q9UK80 565 aa27.74■■■□□ 2.03
CCDC130-209ENST00000588809 NWD2Q9ULI1 1742 aa27.74■■■□□ 2.03
CCDC130-209ENST00000588809 ATRNO75882 1429 aa27.74■■■□□ 2.03
CCDC130-209ENST00000588809 PLCH1Q4KWH8 1693 aa27.73■■■□□ 2.03
CCDC130-209ENST00000588809 BCL9LQ86UU0 1499 aa27.73■■■□□ 2.03
CCDC130-209ENST00000588809 RGS12O14924 1447 aa27.73■■■□□ 2.03
CCDC130-209ENST00000588809 EP400Q96L91 3159 aa27.71■■■□□ 2.03
CCDC130-209ENST00000588809 SLIT2O94813 1529 aa27.7■■■□□ 2.02
CCDC130-209ENST00000588809 GPRASP1Q5JY77 1395 aa27.7■■■□□ 2.02
CCDC130-209ENST00000588809 TRPC5Q9UL62 973 aaPredicted RBP27.69■■■□□ 2.02
CCDC130-209ENST00000588809 NUDT16Q96DE0 195 aaKnown RBP27.67■■■□□ 2.02
CCDC130-209ENST00000588809 CDK19Q9BWU1 502 aa27.66■■■□□ 2.02
CCDC130-209ENST00000588809 TRIM26Q12899 539 aaPredicted RBP27.65■■■□□ 2.02
CCDC130-209ENST00000588809 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
CCDC130-209ENST00000588809 CENPJQ9HC77 1338 aaPredicted RBP27.65■■■□□ 2.02
CCDC130-209ENST00000588809 POLR3AO14802 1390 aaPredicted RBP27.63■■■□□ 2.01
CCDC130-209ENST00000588809 NGDNQ8NEJ9 315 aaKnown RBP27.62■■■□□ 2.01
CCDC130-209ENST00000588809 CABLES1Q8TDN4 633 aa27.62■■■□□ 2.01
CCDC130-209ENST00000588809 NRAPQ86VF7 1730 aa27.61■■■□□ 2.01
CCDC130-209ENST00000588809 PHRF1Q9P1Y6 1649 aaKnown RBP27.61■■■□□ 2.01
CCDC130-209ENST00000588809 LMOD2Q6P5Q4 547 aa27.61■■■□□ 2.01
CCDC130-209ENST00000588809 GLI3P10071 1580 aa27.6■■■□□ 2.01
CCDC130-209ENST00000588809 CCDC61Q9Y6R9 512 aa27.6■■■□□ 2.01
CCDC130-209ENST00000588809 COL14A1Q05707 1796 aaKnown RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms