RNA–Protein interactions for RNA: ENST00000588582.3

LSM14A-206, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-206ENST00000588582 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
LSM14A-206ENST00000588582 IGF1RP08069 1367 aa12.78□□□□□ -0.36
LSM14A-206ENST00000588582 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
LSM14A-206ENST00000588582 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
LSM14A-206ENST00000588582 ANKRD30BQ9BXX2 1392 aa12.78□□□□□ -0.36
LSM14A-206ENST00000588582 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
LSM14A-206ENST00000588582 GTF2F1P35269 517 aaKnown RBP eCLIP12.77□□□□□ -0.36
LSM14A-206ENST00000588582 RTF1Q92541 710 aaKnown RBP12.77□□□□□ -0.36
LSM14A-206ENST00000588582 ZNF500O60304 480 aaPredicted RBP12.77□□□□□ -0.36
LSM14A-206ENST00000588582 GOLGA6L4A6NEF3 574 aa12.77□□□□□ -0.37
LSM14A-206ENST00000588582 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
LSM14A-206ENST00000588582 KLHL34Q8N239 644 aa12.76□□□□□ -0.37
LSM14A-206ENST00000588582 MIA2Q96PC5 1412 aa12.76□□□□□ -0.37
LSM14A-206ENST00000588582 CCDC27Q2M243 656 aa12.76□□□□□ -0.37
LSM14A-206ENST00000588582 PRIMPOLQ96LW4 560 aa12.76□□□□□ -0.37
LSM14A-206ENST00000588582 ADCY5O95622 1261 aa12.76□□□□□ -0.37
LSM14A-206ENST00000588582 TPD52L1Q16890 204 aaPredicted RBP12.76□□□□□ -0.37
LSM14A-206ENST00000588582 SKIDA1Q1XH10 827 aa12.76□□□□□ -0.37
LSM14A-206ENST00000588582 MCM5P33992 734 aa12.75□□□□□ -0.37
LSM14A-206ENST00000588582 PKP1Q13835 747 aa12.75□□□□□ -0.37
LSM14A-206ENST00000588582 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
LSM14A-206ENST00000588582 TAOK2Q9UL54 1235 aa12.75□□□□□ -0.37
LSM14A-206ENST00000588582 PTPN23Q9H3S7 1636 aa12.75□□□□□ -0.37
LSM14A-206ENST00000588582 CD2BP2O95400 341 aaKnown RBP12.75□□□□□ -0.37
LSM14A-206ENST00000588582 TCP11L2Q8N4U5 519 aa12.75□□□□□ -0.37
LSM14A-206ENST00000588582 CCDC112Q8NEF3 446 aa12.75□□□□□ -0.37
LSM14A-206ENST00000588582 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
LSM14A-206ENST00000588582 HCLS1P14317 486 aaPredicted RBP12.74□□□□□ -0.37
LSM14A-206ENST00000588582 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
LSM14A-206ENST00000588582 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
LSM14A-206ENST00000588582 GPATCH11Q8N954 259 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 TMEM51Q9NW97 253 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 SMC5Q8IY18 1101 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 POLR3GO15318 223 aaPredicted RBP12.74□□□□□ -0.37
LSM14A-206ENST00000588582 NEK4P51957 841 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
LSM14A-206ENST00000588582 HS1BP3Q53T59 392 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 GORABQ5T7V8 394 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 LRSAM1Q6UWE0 723 aa12.74□□□□□ -0.37
LSM14A-206ENST00000588582 FIBPO43427 364 aa12.73□□□□□ -0.37
LSM14A-206ENST00000588582 MBD3O95983 291 aa12.73□□□□□ -0.37
LSM14A-206ENST00000588582 RBM25P49756 843 aaKnown RBP12.73□□□□□ -0.37
LSM14A-206ENST00000588582 ZGPATQ8N5A5 531 aaKnown RBP12.73□□□□□ -0.37
LSM14A-206ENST00000588582 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
LSM14A-206ENST00000588582 WWC1Q8IX03 1113 aa12.73□□□□□ -0.37
LSM14A-206ENST00000588582 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
LSM14A-206ENST00000588582 FBLN2P98095 1184 aa12.72□□□□□ -0.37
LSM14A-206ENST00000588582 CHMP4CQ96CF2 233 aa12.72□□□□□ -0.37
LSM14A-206ENST00000588582 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
LSM14A-206ENST00000588582 NKTRP30414 1462 aaKnown RBP12.71□□□□□ -0.37
LSM14A-206ENST00000588582 TNNT1P13805 278 aa12.71□□□□□ -0.37
LSM14A-206ENST00000588582 TMEM63CQ9P1W3 806 aa12.71□□□□□ -0.37
LSM14A-206ENST00000588582 CALCOCO1Q9P1Z2 691 aa12.71□□□□□ -0.37
LSM14A-206ENST00000588582 EXOSC9Q06265 439 aaKnown RBP12.7□□□□□ -0.38
LSM14A-206ENST00000588582 CHD1LQ86WJ1 897 aa12.7□□□□□ -0.38
LSM14A-206ENST00000588582 CCAR2Q8N163 923 aaKnown RBP12.7□□□□□ -0.38
LSM14A-206ENST00000588582 CDC45O75419 566 aa12.7□□□□□ -0.38
LSM14A-206ENST00000588582 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
LSM14A-206ENST00000588582 TRIM5Q9C035 493 aa12.7□□□□□ -0.38
LSM14A-206ENST00000588582 RABEP1Q15276 862 aa12.69□□□□□ -0.38
LSM14A-206ENST00000588582 NOB1Q9ULX3 412 aaKnown RBP12.69□□□□□ -0.38
LSM14A-206ENST00000588582 RPRD2Q5VT52 1461 aaKnown RBP12.69□□□□□ -0.38
LSM14A-206ENST00000588582 GNL2Q13823 731 aaKnown RBP12.69□□□□□ -0.38
LSM14A-206ENST00000588582 PCF11O94913 1555 aaKnown RBP12.68□□□□□ -0.38
LSM14A-206ENST00000588582 ZNF445P59923 1031 aa12.68□□□□□ -0.38
LSM14A-206ENST00000588582 HTATSF1O43719 755 aaKnown RBP12.68□□□□□ -0.38
LSM14A-206ENST00000588582 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
LSM14A-206ENST00000588582 TMEM57Q8N5G2 664 aa12.68□□□□□ -0.38
LSM14A-206ENST00000588582 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
LSM14A-206ENST00000588582 DTNBO60941 627 aa12.68□□□□□ -0.38
LSM14A-206ENST00000588582 TEX35Q5T0J7 233 aa12.67□□□□□ -0.38
LSM14A-206ENST00000588582 C10orf67Q8IYJ2 551 aa12.67□□□□□ -0.38
LSM14A-206ENST00000588582 OGFRQ9NZT2 677 aa12.67□□□□□ -0.38
LSM14A-206ENST00000588582 PARD3Q8TEW0 1356 aa12.67□□□□□ -0.38
LSM14A-206ENST00000588582 MCCP23508 829 aa12.67□□□□□ -0.38
LSM14A-206ENST00000588582 KRT222Q8N1A0 295 aa12.67□□□□□ -0.38
LSM14A-206ENST00000588582 RILPL2Q969X0 211 aa12.67□□□□□ -0.38
LSM14A-206ENST00000588582 SNX21Q969T3 373 aa12.66□□□□□ -0.38
LSM14A-206ENST00000588582 TRMT1Q9NXH9 659 aaKnown RBP12.66□□□□□ -0.38
LSM14A-206ENST00000588582 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.66□□□□□ -0.38
LSM14A-206ENST00000588582 PER1O15534 1290 aaPredicted RBP12.66□□□□□ -0.38
LSM14A-206ENST00000588582 NAA30Q147X3 362 aaPredicted RBP12.66□□□□□ -0.38
LSM14A-206ENST00000588582 PIBF1Q8WXW3 757 aa12.66□□□□□ -0.38
LSM14A-206ENST00000588582 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
LSM14A-206ENST00000588582 ANO2Q9NQ90 1003 aa12.66□□□□□ -0.38
LSM14A-206ENST00000588582 SPATA31E1Q6ZUB1 1445 aa12.66□□□□□ -0.38
LSM14A-206ENST00000588582 SAFB2Q14151 953 aaKnown RBP eCLIP12.66□□□□□ -0.38
LSM14A-206ENST00000588582 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
LSM14A-206ENST00000588582 GPT2Q8TD30 523 aa12.66□□□□□ -0.38
LSM14A-206ENST00000588582 LARP6Q9BRS8 491 aaKnown RBP12.66□□□□□ -0.38
LSM14A-206ENST00000588582 NSFL1CQ9UNZ2 370 aaKnown RBP12.66□□□□□ -0.38
LSM14A-206ENST00000588582 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
LSM14A-206ENST00000588582 VPS37CA5D8V6 355 aaPredicted RBP12.65□□□□□ -0.38
LSM14A-206ENST00000588582 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
LSM14A-206ENST00000588582 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
LSM14A-206ENST00000588582 GIMAP6Q6P9H5 292 aa12.64□□□□□ -0.39
LSM14A-206ENST00000588582 UPF3BQ9BZI7 483 aaKnown RBP12.64□□□□□ -0.39
LSM14A-206ENST00000588582 CUX1P39880 1505 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms