RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 JCADQ9P266 1359 aa24.86■■□□□ 1.57
RFX1-203ENST00000588520 WAPLQ7Z5K2 1190 aa24.86■■□□□ 1.57
RFX1-203ENST00000588520 NHSL1Q5SYE7 1610 aa24.84■■□□□ 1.57
RFX1-203ENST00000588520 PLEKHH1Q9ULM0 1364 aa24.83■■□□□ 1.57
RFX1-203ENST00000588520 PRAM1Q96QH2 718 aa24.8■■□□□ 1.56
RFX1-203ENST00000588520 POGKQ9P215 609 aa24.79■■□□□ 1.56
RFX1-203ENST00000588520 L3MBTL2Q969R5 705 aa24.78■■□□□ 1.56
RFX1-203ENST00000588520 SIN3AQ96ST3 1273 aa24.78■■□□□ 1.56
RFX1-203ENST00000588520 ADGRB2O60241 1585 aa24.78■■□□□ 1.56
RFX1-203ENST00000588520 SPATA31A6Q5VVP1 1343 aa24.78■■□□□ 1.56
RFX1-203ENST00000588520 TRAK1Q9UPV9 953 aa24.77■■□□□ 1.56
RFX1-203ENST00000588520 FMN2Q9NZ56 1722 aa24.77■■□□□ 1.56
RFX1-203ENST00000588520 SHPRHQ149N8 1683 aa24.76■■□□□ 1.55
RFX1-203ENST00000588520 LRRC59Q96AG4 307 aaKnown RBP24.76■■□□□ 1.55
RFX1-203ENST00000588520 ORAI2Q96SN7 254 aa24.74■■□□□ 1.55
RFX1-203ENST00000588520 EIF3AQ14152 1382 aaKnown RBP24.74■■□□□ 1.55
RFX1-203ENST00000588520 NEUROD1Q13562 356 aa24.73■■□□□ 1.55
RFX1-203ENST00000588520 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
RFX1-203ENST00000588520 SOS2Q07890 1332 aaPredicted RBP24.72■■□□□ 1.55
RFX1-203ENST00000588520 NPHP3Q7Z494 1330 aa24.72■■□□□ 1.55
RFX1-203ENST00000588520 ESCO1Q5FWF5 840 aa24.72■■□□□ 1.55
RFX1-203ENST00000588520 ARHGEF28Q8N1W1 1705 aaKnown RBP24.72■■□□□ 1.55
RFX1-203ENST00000588520 ANKARQ7Z5J8 1434 aa24.71■■□□□ 1.55
RFX1-203ENST00000588520 KIF1AQ12756 1690 aa24.71■■□□□ 1.55
RFX1-203ENST00000588520 SAFB2Q14151 953 aaKnown RBP eCLIP24.68■■□□□ 1.54
RFX1-203ENST00000588520 TONSLQ96HA7 1378 aa24.66■■□□□ 1.54
RFX1-203ENST00000588520 NBPF1Q3BBV0 1214 aa24.65■■□□□ 1.54
RFX1-203ENST00000588520 TRPM1Q7Z4N2 1603 aa24.64■■□□□ 1.54
RFX1-203ENST00000588520 DDX17Q92841 729 aaKnown RBP24.64■■□□□ 1.54
RFX1-203ENST00000588520 PNPLA6Q8IY17 1366 aa24.64■■□□□ 1.53
RFX1-203ENST00000588520 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
RFX1-203ENST00000588520 NUTM2FA1L443 756 aa24.63■■□□□ 1.53
RFX1-203ENST00000588520 WASLO00401 505 aaPredicted RBP24.63■■□□□ 1.53
RFX1-203ENST00000588520 PXDNQ92626 1479 aa24.63■■□□□ 1.53
RFX1-203ENST00000588520 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
RFX1-203ENST00000588520 FOXO3O43524 673 aa24.62■■□□□ 1.53
RFX1-203ENST00000588520 CLSPNQ9HAW4 1339 aa24.61■■□□□ 1.53
RFX1-203ENST00000588520 PHF8Q9UPP1 1060 aa24.61■■□□□ 1.53
RFX1-203ENST00000588520 ROCK2O75116 1388 aaKnown RBP24.59■■□□□ 1.53
RFX1-203ENST00000588520 HIRIP3Q9BW71 556 aaPredicted RBP24.59■■□□□ 1.53
RFX1-203ENST00000588520 LRP6O75581 1613 aa24.59■■□□□ 1.53
RFX1-203ENST00000588520 GPRASP1Q5JY77 1395 aa24.58■■□□□ 1.53
RFX1-203ENST00000588520 USP32Q8NFA0 1604 aa24.58■■□□□ 1.53
RFX1-203ENST00000588520 ILDR2Q71H61 639 aa24.58■■□□□ 1.53
RFX1-203ENST00000588520 CENPJQ9HC77 1338 aaPredicted RBP24.58■■□□□ 1.52
RFX1-203ENST00000588520 COL22A1Q8NFW1 1626 aaPredicted RBP24.57■■□□□ 1.52
RFX1-203ENST00000588520 RGPD8O14715 1765 aaPredicted RBP24.57■■□□□ 1.52
RFX1-203ENST00000588520 PSME1Q06323 249 aa24.56■■□□□ 1.52
RFX1-203ENST00000588520 MEX3CQ5U5Q3 659 aaKnown RBP24.56■■□□□ 1.52
RFX1-203ENST00000588520 PCGF6Q9BYE7 350 aa24.56■■□□□ 1.52
RFX1-203ENST00000588520 RGS17Q9UGC6 210 aaPredicted RBP24.54■■□□□ 1.52
RFX1-203ENST00000588520 ITSN1Q15811 1721 aa24.53■■□□□ 1.52
RFX1-203ENST00000588520 SBNO1A3KN83 1393 aa24.53■■□□□ 1.52
RFX1-203ENST00000588520 ATP7BP35670 1465 aa24.52■■□□□ 1.52
RFX1-203ENST00000588520 RALGAPBQ86X10 1494 aa24.52■■□□□ 1.52
RFX1-203ENST00000588520 KRT28Q7Z3Y7 464 aa24.52■■□□□ 1.52
RFX1-203ENST00000588520 SPATA31A3Q5VYP0 1347 aa24.52■■□□□ 1.52
RFX1-203ENST00000588520 PRR36Q9H6K5 1346 aa24.52■■□□□ 1.52
RFX1-203ENST00000588520 NBPF8Q3BBV2 869 aa24.51■■□□□ 1.51
RFX1-203ENST00000588520 ZNF772Q68DY9 489 aaPredicted RBP24.51■■□□□ 1.51
RFX1-203ENST00000588520 TIMELESSQ9UNS1 1208 aa24.51■■□□□ 1.51
RFX1-203ENST00000588520 NUTM2BA6NNL0 878 aaPredicted RBP24.5■■□□□ 1.51
RFX1-203ENST00000588520 NUTM2EB1AL46 878 aaPredicted RBP24.5■■□□□ 1.51
RFX1-203ENST00000588520 NUTM2AQ8IVF1 878 aaPredicted RBP24.5■■□□□ 1.51
RFX1-203ENST00000588520 CDK19Q9BWU1 502 aa24.5■■□□□ 1.51
RFX1-203ENST00000588520 QRICH2Q9H0J4 1663 aa24.5■■□□□ 1.51
RFX1-203ENST00000588520 NUDT16Q96DE0 195 aaKnown RBP24.49■■□□□ 1.51
RFX1-203ENST00000588520 TNS3Q68CZ2 1445 aa24.49■■□□□ 1.51
RFX1-203ENST00000588520 ARHGEF10O15013 1369 aa24.48■■□□□ 1.51
RFX1-203ENST00000588520 XPCQ01831 940 aaPredicted RBP24.48■■□□□ 1.51
RFX1-203ENST00000588520 PMFBP1Q8TBY8 1022 aa24.47■■□□□ 1.51
RFX1-203ENST00000588520 CCDC61Q9Y6R9 512 aa24.47■■□□□ 1.51
RFX1-203ENST00000588520 SBNO2Q9Y2G9 1366 aa24.45■■□□□ 1.5
RFX1-203ENST00000588520 SOCS7O14512 581 aa24.45■■□□□ 1.5
RFX1-203ENST00000588520 CARD11Q9BXL7 1154 aa24.45■■□□□ 1.5
RFX1-203ENST00000588520 TOPAZ1Q8N9V7 1692 aa24.45■■□□□ 1.5
RFX1-203ENST00000588520 NGDNQ8NEJ9 315 aaKnown RBP24.44■■□□□ 1.5
RFX1-203ENST00000588520 EVC2Q86UK5 1308 aa24.43■■□□□ 1.5
RFX1-203ENST00000588520 POLR3AO14802 1390 aaPredicted RBP24.42■■□□□ 1.5
RFX1-203ENST00000588520 PLEKHG3A1L390 1219 aa24.42■■□□□ 1.5
RFX1-203ENST00000588520 SRPK2P78362 688 aaKnown RBP24.42■■□□□ 1.5
RFX1-203ENST00000588520 POTEAQ6S8J7 498 aa24.41■■□□□ 1.5
RFX1-203ENST00000588520 TRPM3Q9HCF6 1732 aaPredicted RBP24.41■■□□□ 1.5
RFX1-203ENST00000588520 C8orf37Q96NL8 207 aa24.4■■□□□ 1.5
RFX1-203ENST00000588520 AFF2P51816 1311 aa24.39■■□□□ 1.5
RFX1-203ENST00000588520 ADAMTS2O95450 1211 aa24.39■■□□□ 1.49
RFX1-203ENST00000588520 NGLY1Q96IV0 654 aa24.38■■□□□ 1.49
RFX1-203ENST00000588520 BRD4O60885 1362 aaPredicted RBP24.38■■□□□ 1.49
RFX1-203ENST00000588520 SLC24A1O60721 1099 aa24.37■■□□□ 1.49
RFX1-203ENST00000588520 MARF1Q9Y4F3 1742 aaKnown RBP24.37■■□□□ 1.49
RFX1-203ENST00000588520 ALS2Q96Q42 1657 aa24.37■■□□□ 1.49
RFX1-203ENST00000588520 PPIP5K1Q6PFW1 1433 aa24.36■■□□□ 1.49
RFX1-203ENST00000588520 FNBP4Q8N3X1 1017 aaPredicted RBP24.36■■□□□ 1.49
RFX1-203ENST00000588520 CABP2Q9NPB3 220 aa24.35■■□□□ 1.49
RFX1-203ENST00000588520 ACEP12821 1306 aa24.35■■□□□ 1.49
RFX1-203ENST00000588520 ATAD2Q6PL18 1390 aa24.34■■□□□ 1.49
RFX1-203ENST00000588520 LMOD2Q6P5Q4 547 aa24.33■■□□□ 1.49
RFX1-203ENST00000588520 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
RFX1-203ENST00000588520 CDK12Q9NYV4 1490 aaPredicted RBP24.32■■□□□ 1.48
RFX1-203ENST00000588520 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms