RNA–Protein interactions for RNA: ENST00000588491.1

TNPO2-212, Transcript of transportin 2, humanhuman

TSL 5

Gene TNPO2, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-212ENST00000588491 NPHP3Q7Z494 1330 aa24.05■■□□□ 1.44
TNPO2-212ENST00000588491 ATAD2Q6PL18 1390 aa24.03■■□□□ 1.44
TNPO2-212ENST00000588491 CDC42BPGQ6DT37 1551 aa24.03■■□□□ 1.44
TNPO2-212ENST00000588491 COL22A1Q8NFW1 1626 aaPredicted RBP24.03■■□□□ 1.44
TNPO2-212ENST00000588491 FOXD1Q16676 465 aa24.02■■□□□ 1.44
TNPO2-212ENST00000588491 CCDC144AA2RUR9 1427 aa24.01■■□□□ 1.43
TNPO2-212ENST00000588491 FNBP4Q8N3X1 1017 aaPredicted RBP24.01■■□□□ 1.43
TNPO2-212ENST00000588491 STK26Q9P289 416 aa24.01■■□□□ 1.43
TNPO2-212ENST00000588491 RGL3Q3MIN7 710 aa24■■□□□ 1.43
TNPO2-212ENST00000588491 ADGRF5Q8IZF2 1346 aa23.99■■□□□ 1.43
TNPO2-212ENST00000588491 LRPPRCP42704 1394 aaKnown RBP23.99■■□□□ 1.43
TNPO2-212ENST00000588491 NUTM2FA1L443 756 aa23.98■■□□□ 1.43
TNPO2-212ENST00000588491 FOXO3O43524 673 aa23.98■■□□□ 1.43
TNPO2-212ENST00000588491 XPCQ01831 940 aaPredicted RBP23.98■■□□□ 1.43
TNPO2-212ENST00000588491 ATRNO75882 1429 aa23.98■■□□□ 1.43
TNPO2-212ENST00000588491 MYOM2P54296 1465 aa23.97■■□□□ 1.43
TNPO2-212ENST00000588491 PXDNQ92626 1479 aa23.96■■□□□ 1.43
TNPO2-212ENST00000588491 WAPLQ7Z5K2 1190 aa23.96■■□□□ 1.43
TNPO2-212ENST00000588491 MARF1Q9Y4F3 1742 aaKnown RBP23.96■■□□□ 1.43
TNPO2-212ENST00000588491 ANKRD30BQ9BXX2 1392 aa23.95■■□□□ 1.42
TNPO2-212ENST00000588491 TECPR2O15040 1411 aa23.94■■□□□ 1.42
TNPO2-212ENST00000588491 IFT172Q9UG01 1749 aa23.93■■□□□ 1.42
TNPO2-212ENST00000588491 KNDC1Q76NI1 1749 aa23.93■■□□□ 1.42
TNPO2-212ENST00000588491 TMEM132EQ6IEE7 984 aa23.92■■□□□ 1.42
TNPO2-212ENST00000588491 SPATA31E1Q6ZUB1 1445 aa23.92■■□□□ 1.42
TNPO2-212ENST00000588491 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
TNPO2-212ENST00000588491 MPHOSPH9Q99550 1183 aa23.9■■□□□ 1.42
TNPO2-212ENST00000588491 PLEKHH1Q9ULM0 1364 aa23.9■■□□□ 1.42
TNPO2-212ENST00000588491 FMN2Q9NZ56 1722 aa23.89■■□□□ 1.41
TNPO2-212ENST00000588491 BCL9LQ86UU0 1499 aa23.88■■□□□ 1.41
TNPO2-212ENST00000588491 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
TNPO2-212ENST00000588491 PIK3C2GO75747 1445 aa23.87■■□□□ 1.41
TNPO2-212ENST00000588491 YTHDC2Q9H6S0 1430 aaKnown RBP23.87■■□□□ 1.41
TNPO2-212ENST00000588491 GJD4Q96KN9 370 aaPredicted RBP23.87■■□□□ 1.41
TNPO2-212ENST00000588491 HAP1P54257 671 aaPredicted RBP23.85■■□□□ 1.41
TNPO2-212ENST00000588491 ZRANB1Q9UGI0 708 aa23.85■■□□□ 1.41
TNPO2-212ENST00000588491 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
TNPO2-212ENST00000588491 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.84■■□□□ 1.41
TNPO2-212ENST00000588491 KRT28Q7Z3Y7 464 aa23.83■■□□□ 1.41
TNPO2-212ENST00000588491 CCDC125Q86Z20 511 aa23.83■■□□□ 1.41
TNPO2-212ENST00000588491 UNC5CLQ8IV45 518 aa23.83■■□□□ 1.41
TNPO2-212ENST00000588491 EP400Q96L91 3159 aa23.82■■□□□ 1.4
TNPO2-212ENST00000588491 PSME1Q06323 249 aa23.8■■□□□ 1.4
TNPO2-212ENST00000588491 USP32Q8NFA0 1604 aa23.8■■□□□ 1.4
TNPO2-212ENST00000588491 DHX57Q6P158 1386 aaKnown RBP23.79■■□□□ 1.4
TNPO2-212ENST00000588491 RGPD8O14715 1765 aaPredicted RBP23.79■■□□□ 1.4
TNPO2-212ENST00000588491 SIRT1Q96EB6 747 aa23.79■■□□□ 1.4
TNPO2-212ENST00000588491 PHF8Q9UPP1 1060 aa23.79■■□□□ 1.4
TNPO2-212ENST00000588491 RALGAPBQ86X10 1494 aa23.79■■□□□ 1.4
TNPO2-212ENST00000588491 SLIT2O94813 1529 aa23.79■■□□□ 1.4
TNPO2-212ENST00000588491 PLEKHG5O94827 1062 aa23.78■■□□□ 1.4
TNPO2-212ENST00000588491 C14orf93Q9H972 538 aaKnown RBP23.78■■□□□ 1.4
TNPO2-212ENST00000588491 SRCAPQ6ZRS2 3230 aa23.78■■□□□ 1.4
TNPO2-212ENST00000588491 TNS3Q68CZ2 1445 aa23.77■■□□□ 1.4
TNPO2-212ENST00000588491 SAFB2Q14151 953 aaKnown RBP eCLIP23.76■■□□□ 1.39
TNPO2-212ENST00000588491 LMOD2Q6P5Q4 547 aa23.76■■□□□ 1.39
TNPO2-212ENST00000588491 GLI3P10071 1580 aa23.76■■□□□ 1.39
TNPO2-212ENST00000588491 ACIN1Q9UKV3 1341 aaKnown RBP23.76■■□□□ 1.39
TNPO2-212ENST00000588491 CFAP70Q5T0N1 1121 aa23.75■■□□□ 1.39
TNPO2-212ENST00000588491 PRAM1Q96QH2 718 aa23.74■■□□□ 1.39
TNPO2-212ENST00000588491 CABLES1Q8TDN4 633 aa23.73■■□□□ 1.39
TNPO2-212ENST00000588491 POGKQ9P215 609 aa23.73■■□□□ 1.39
TNPO2-212ENST00000588491 CCDC9Q9Y3X0 531 aaKnown RBP23.73■■□□□ 1.39
TNPO2-212ENST00000588491 NRXN1Q9ULB1 1477 aa23.72■■□□□ 1.39
TNPO2-212ENST00000588491 BRWD3Q6RI45 1802 aa23.71■■□□□ 1.39
TNPO2-212ENST00000588491 BLMP54132 1417 aaPredicted RBP23.71■■□□□ 1.39
TNPO2-212ENST00000588491 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
TNPO2-212ENST00000588491 ARHGEF10O15013 1369 aa23.71■■□□□ 1.39
TNPO2-212ENST00000588491 SF3B2Q13435 895 aaKnown RBP23.71■■□□□ 1.39
TNPO2-212ENST00000588491 PLCH1Q4KWH8 1693 aa23.7■■□□□ 1.39
TNPO2-212ENST00000588491 VPS72Q15906 364 aa23.7■■□□□ 1.38
TNPO2-212ENST00000588491 NWD2Q9ULI1 1742 aa23.7■■□□□ 1.38
TNPO2-212ENST00000588491 SEPT12Q8IYM1 358 aa23.69■■□□□ 1.38
TNPO2-212ENST00000588491 PMFBP1Q8TBY8 1022 aa23.68■■□□□ 1.38
TNPO2-212ENST00000588491 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
TNPO2-212ENST00000588491 DLC1Q96QB1 1528 aa23.66■■□□□ 1.38
TNPO2-212ENST00000588491 ANKARQ7Z5J8 1434 aa23.66■■□□□ 1.38
TNPO2-212ENST00000588491 A0A0G2JS52 829 aa23.65■■□□□ 1.38
TNPO2-212ENST00000588491 MYT1Q01538 1121 aa23.65■■□□□ 1.38
TNPO2-212ENST00000588491 DEFB132Q7Z7B7 95 aa23.64■■□□□ 1.37
TNPO2-212ENST00000588491 ADGRB2O60241 1585 aa23.62■■□□□ 1.37
TNPO2-212ENST00000588491 KRT27Q7Z3Y8 459 aa23.62■■□□□ 1.37
TNPO2-212ENST00000588491 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
TNPO2-212ENST00000588491 HIRIP3Q9BW71 556 aaPredicted RBP23.61■■□□□ 1.37
TNPO2-212ENST00000588491 TRAK1Q9UPV9 953 aa23.61■■□□□ 1.37
TNPO2-212ENST00000588491 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
TNPO2-212ENST00000588491 FAM83GA6ND36 823 aa23.6■■□□□ 1.37
TNPO2-212ENST00000588491 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
TNPO2-212ENST00000588491 ONECUT3O60422 494 aaPredicted RBP23.59■■□□□ 1.37
TNPO2-212ENST00000588491 RAB3GAP2Q9H2M9 1393 aa23.58■■□□□ 1.37
TNPO2-212ENST00000588491 KDM2AQ9Y2K7 1162 aa23.58■■□□□ 1.37
TNPO2-212ENST00000588491 TRPM3Q9HCF6 1732 aaPredicted RBP23.58■■□□□ 1.37
TNPO2-212ENST00000588491 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
TNPO2-212ENST00000588491 BTG4Q9NY30 223 aa23.57■■□□□ 1.36
TNPO2-212ENST00000588491 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
TNPO2-212ENST00000588491 FAM98CQ17RN3 349 aaKnown RBP23.56■■□□□ 1.36
TNPO2-212ENST00000588491 TULP4Q9NRJ4 1543 aa23.55■■□□□ 1.36
TNPO2-212ENST00000588491 COL14A1Q05707 1796 aaKnown RBP23.55■■□□□ 1.36
TNPO2-212ENST00000588491 ALS2Q96Q42 1657 aa23.54■■□□□ 1.36
TNPO2-212ENST00000588491 BAG6P46379 1132 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms