RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 SHPRHQ149N8 1683 aa15.3■□□□□ 0.04
TPM4-209ENST00000588483 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
TPM4-209ENST00000588483 WAPLQ7Z5K2 1190 aa15.28■□□□□ 0.04
TPM4-209ENST00000588483 STK26Q9P289 416 aa15.28■□□□□ 0.04
TPM4-209ENST00000588483 FMN2Q9NZ56 1722 aa15.28■□□□□ 0.04
TPM4-209ENST00000588483 ADGRB2O60241 1585 aa15.28■□□□□ 0.04
TPM4-209ENST00000588483 KDM2AQ9Y2K7 1162 aa15.26■□□□□ 0.03
TPM4-209ENST00000588483 SPATA31A6Q5VVP1 1343 aa15.24■□□□□ 0.03
TPM4-209ENST00000588483 ARHGEF28Q8N1W1 1705 aaKnown RBP15.24■□□□□ 0.03
TPM4-209ENST00000588483 ILDR2Q71H61 639 aa15.23■□□□□ 0.03
TPM4-209ENST00000588483 SOS2Q07890 1332 aaPredicted RBP15.22■□□□□ 0.03
TPM4-209ENST00000588483 PRAM1Q96QH2 718 aa15.22■□□□□ 0.03
TPM4-209ENST00000588483 ORAI2Q96SN7 254 aa15.22■□□□□ 0.03
TPM4-209ENST00000588483 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
TPM4-209ENST00000588483 LRRC59Q96AG4 307 aaKnown RBP15.21■□□□□ 0.03
TPM4-209ENST00000588483 LRP6O75581 1613 aa15.21■□□□□ 0.02
TPM4-209ENST00000588483 PXDNQ92626 1479 aa15.2■□□□□ 0.02
TPM4-209ENST00000588483 ANKARQ7Z5J8 1434 aa15.19■□□□□ 0.02
TPM4-209ENST00000588483 L3MBTL2Q969R5 705 aa15.19■□□□□ 0.02
TPM4-209ENST00000588483 TRAK1Q9UPV9 953 aa15.19■□□□□ 0.02
TPM4-209ENST00000588483 PNPLA6Q8IY17 1366 aa15.19■□□□□ 0.02
TPM4-209ENST00000588483 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
TPM4-209ENST00000588483 USP32Q8NFA0 1604 aa15.18■□□□□ 0.02
TPM4-209ENST00000588483 COL22A1Q8NFW1 1626 aaPredicted RBP15.18■□□□□ 0.02
TPM4-209ENST00000588483 DDX17Q92841 729 aaKnown RBP15.18■□□□□ 0.02
TPM4-209ENST00000588483 SIN3AQ96ST3 1273 aa15.18■□□□□ 0.02
TPM4-209ENST00000588483 PHF23Q9BUL5 403 aaPredicted RBP15.18■□□□□ 0.02
TPM4-209ENST00000588483 RGS17Q9UGC6 210 aaPredicted RBP15.18■□□□□ 0.02
TPM4-209ENST00000588483 RGPD8O14715 1765 aaPredicted RBP15.17■□□□□ 0.02
TPM4-209ENST00000588483 ESCO1Q5FWF5 840 aa15.17■□□□□ 0.02
TPM4-209ENST00000588483 POGKQ9P215 609 aa15.17■□□□□ 0.02
TPM4-209ENST00000588483 TRPM1Q7Z4N2 1603 aa15.17■□□□□ 0.02
TPM4-209ENST00000588483 EIF3AQ14152 1382 aaKnown RBP15.16■□□□□ 0.02
TPM4-209ENST00000588483 TULP4Q9NRJ4 1543 aa15.16■□□□□ 0.02
TPM4-209ENST00000588483 SAFB2Q14151 953 aaKnown RBP eCLIP15.14■□□□□ 0.01
TPM4-209ENST00000588483 NBPF1Q3BBV0 1214 aa15.14■□□□□ 0.01
TPM4-209ENST00000588483 NUTM2FA1L443 756 aa15.12■□□□□ 0.01
TPM4-209ENST00000588483 WASLO00401 505 aaPredicted RBP15.12■□□□□ 0.01
TPM4-209ENST00000588483 FOXO3O43524 673 aa15.12■□□□□ 0.01
TPM4-209ENST00000588483 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
TPM4-209ENST00000588483 SOCS7O14512 581 aa15.11■□□□□ 0.01
TPM4-209ENST00000588483 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
TPM4-209ENST00000588483 PHF8Q9UPP1 1060 aa15.11■□□□□ 0.01
TPM4-209ENST00000588483 ATP7BP35670 1465 aa15.11■□□□□ 0.01
TPM4-209ENST00000588483 ITSN1Q15811 1721 aa15.11■□□□□ 0.01
TPM4-209ENST00000588483 MINK1Q8N4C8 1332 aaPredicted RBP15.11■□□□□ 0.01
TPM4-209ENST00000588483 HIRIP3Q9BW71 556 aaPredicted RBP15.1■□□□□ 0.01
TPM4-209ENST00000588483 PRR36Q9H6K5 1346 aa15.1■□□□□ 0.01
TPM4-209ENST00000588483 SBNO1A3KN83 1393 aa15.1■□□□□ 0.01
TPM4-209ENST00000588483 TOPAZ1Q8N9V7 1692 aa15.09■□□□□ 0.01
TPM4-209ENST00000588483 SPATA31A3Q5VYP0 1347 aa15.09■□□□□ 0.01
TPM4-209ENST00000588483 POTEAQ6S8J7 498 aa15.08■□□□□ 0
TPM4-209ENST00000588483 CENPJQ9HC77 1338 aaPredicted RBP15.08■□□□□ 0
TPM4-209ENST00000588483 TRPM3Q9HCF6 1732 aaPredicted RBP15.08■□□□□ 0
TPM4-209ENST00000588483 TNS3Q68CZ2 1445 aa15.08■□□□□ 0
TPM4-209ENST00000588483 QRICH2Q9H0J4 1663 aa15.07■□□□□ 0
TPM4-209ENST00000588483 ZNF772Q68DY9 489 aaPredicted RBP15.07■□□□□ 0
TPM4-209ENST00000588483 TONSLQ96HA7 1378 aa15.07■□□□□ 0
TPM4-209ENST00000588483 NBPF8Q3BBV2 869 aa15.06■□□□□ 0
TPM4-209ENST00000588483 MEX3CQ5U5Q3 659 aaKnown RBP15.06■□□□□ 0
TPM4-209ENST00000588483 KRT28Q7Z3Y7 464 aa15.06■□□□□ 0
TPM4-209ENST00000588483 ROCK2O75116 1388 aaKnown RBP15.06■□□□□ 0
TPM4-209ENST00000588483 RALGAPBQ86X10 1494 aa15.06■□□□□ 0
TPM4-209ENST00000588483 MARF1Q9Y4F3 1742 aaKnown RBP15.06■□□□□ 0
TPM4-209ENST00000588483 NUTM2BA6NNL0 878 aaPredicted RBP15.05■□□□□ -0
TPM4-209ENST00000588483 NUTM2EB1AL46 878 aaPredicted RBP15.05■□□□□ -0
TPM4-209ENST00000588483 XPCQ01831 940 aaPredicted RBP15.05■□□□□ -0
TPM4-209ENST00000588483 PSME1Q06323 249 aa15.05■□□□□ -0
TPM4-209ENST00000588483 NUTM2AQ8IVF1 878 aaPredicted RBP15.05■□□□□ -0
TPM4-209ENST00000588483 ALS2Q96Q42 1657 aa15.04■□□□□ -0
TPM4-209ENST00000588483 ARHGEF10O15013 1369 aa15.04■□□□□ -0
TPM4-209ENST00000588483 CLSPNQ9HAW4 1339 aa15.04■□□□□ -0
TPM4-209ENST00000588483 CDK19Q9BWU1 502 aa15.04■□□□□ -0
TPM4-209ENST00000588483 POLR3AO14802 1390 aaPredicted RBP15.03■□□□□ -0
TPM4-209ENST00000588483 SBNO2Q9Y2G9 1366 aa15.03■□□□□ -0
TPM4-209ENST00000588483 AFF2P51816 1311 aa15.03■□□□□ -0
TPM4-209ENST00000588483 NUDT16Q96DE0 195 aaKnown RBP15.03■□□□□ -0
TPM4-209ENST00000588483 ABCA3Q99758 1704 aa15.03■□□□□ -0
TPM4-209ENST00000588483 PMFBP1Q8TBY8 1022 aa15.02■□□□□ -0
TPM4-209ENST00000588483 CDK12Q9NYV4 1490 aaPredicted RBP15.01□□□□□ -0.01
TPM4-209ENST00000588483 PLEKHG3A1L390 1219 aa15.01□□□□□ -0.01
TPM4-209ENST00000588483 FNBP4Q8N3X1 1017 aaPredicted RBP15.01□□□□□ -0.01
TPM4-209ENST00000588483 CCDC61Q9Y6R9 512 aa15.01□□□□□ -0.01
TPM4-209ENST00000588483 C8orf37Q96NL8 207 aa15□□□□□ -0.01
TPM4-209ENST00000588483 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.99□□□□□ -0.01
TPM4-209ENST00000588483 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
TPM4-209ENST00000588483 ADAMTS2O95450 1211 aa14.98□□□□□ -0.01
TPM4-209ENST00000588483 TIMELESSQ9UNS1 1208 aa14.98□□□□□ -0.01
TPM4-209ENST00000588483 SLIT2O94813 1529 aa14.97□□□□□ -0.01
TPM4-209ENST00000588483 BCL9LQ86UU0 1499 aa14.97□□□□□ -0.01
TPM4-209ENST00000588483 NGDNQ8NEJ9 315 aaKnown RBP14.97□□□□□ -0.01
TPM4-209ENST00000588483 NGLY1Q96IV0 654 aa14.97□□□□□ -0.01
TPM4-209ENST00000588483 BRD4O60885 1362 aaPredicted RBP14.97□□□□□ -0.01
TPM4-209ENST00000588483 EVC2Q86UK5 1308 aa14.96□□□□□ -0.01
TPM4-209ENST00000588483 ATRNO75882 1429 aa14.96□□□□□ -0.01
TPM4-209ENST00000588483 PPIP5K1Q6PFW1 1433 aa14.96□□□□□ -0.01
TPM4-209ENST00000588483 ACEP12821 1306 aa14.95□□□□□ -0.02
TPM4-209ENST00000588483 SRPK2P78362 688 aaKnown RBP14.95□□□□□ -0.02
TPM4-209ENST00000588483 CARD11Q9BXL7 1154 aa14.95□□□□□ -0.02
TPM4-209ENST00000588483 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms