RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 ORAI2Q96SN7 254 aa19.83■□□□□ 0.77
PKN1-211ENST00000588200 DDX17Q92841 729 aaKnown RBP19.81■□□□□ 0.76
PKN1-211ENST00000588200 C14orf93Q9H972 538 aaKnown RBP19.81■□□□□ 0.76
PKN1-211ENST00000588200 MYOM2P54296 1465 aa19.8■□□□□ 0.76
PKN1-211ENST00000588200 HRCP23327 699 aa19.8■□□□□ 0.76
PKN1-211ENST00000588200 COL22A1Q8NFW1 1626 aaPredicted RBP19.8■□□□□ 0.76
PKN1-211ENST00000588200 RXRBP28702 533 aa19.79■□□□□ 0.76
PKN1-211ENST00000588200 AFF2P51816 1311 aa19.78■□□□□ 0.76
PKN1-211ENST00000588200 YTHDC2Q9H6S0 1430 aaKnown RBP19.78■□□□□ 0.76
PKN1-211ENST00000588200 NUTM2BA6NNL0 878 aaPredicted RBP19.78■□□□□ 0.76
PKN1-211ENST00000588200 NUTM2EB1AL46 878 aaPredicted RBP19.78■□□□□ 0.76
PKN1-211ENST00000588200 NUTM2AQ8IVF1 878 aaPredicted RBP19.78■□□□□ 0.76
PKN1-211ENST00000588200 RAB3GAP2Q9H2M9 1393 aa19.78■□□□□ 0.76
PKN1-211ENST00000588200 NPHP3Q7Z494 1330 aa19.77■□□□□ 0.76
PKN1-211ENST00000588200 PXDNQ92626 1479 aa19.75■□□□□ 0.75
PKN1-211ENST00000588200 TMEM132EQ6IEE7 984 aa19.75■□□□□ 0.75
PKN1-211ENST00000588200 WAPLQ7Z5K2 1190 aa19.75■□□□□ 0.75
PKN1-211ENST00000588200 FMN2Q9NZ56 1722 aa19.74■□□□□ 0.75
PKN1-211ENST00000588200 STAC3Q96MF2 364 aa19.74■□□□□ 0.75
PKN1-211ENST00000588200 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
PKN1-211ENST00000588200 STK26Q9P289 416 aa19.73■□□□□ 0.75
PKN1-211ENST00000588200 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
PKN1-211ENST00000588200 RBM6P78332 1123 aaKnown RBP19.72■□□□□ 0.75
PKN1-211ENST00000588200 FNBP4Q8N3X1 1017 aaPredicted RBP19.72■□□□□ 0.75
PKN1-211ENST00000588200 C8orf37Q96NL8 207 aa19.72■□□□□ 0.75
PKN1-211ENST00000588200 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
PKN1-211ENST00000588200 KIF1AQ12756 1690 aa19.71■□□□□ 0.75
PKN1-211ENST00000588200 DLC1Q96QB1 1528 aa19.71■□□□□ 0.75
PKN1-211ENST00000588200 UPF1Q92900 1129 aaKnown RBP eCLIP19.7■□□□□ 0.74
PKN1-211ENST00000588200 QTRT2Q9H974 415 aaKnown RBP19.7■□□□□ 0.74
PKN1-211ENST00000588200 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
PKN1-211ENST00000588200 NGLY1Q96IV0 654 aa19.69■□□□□ 0.74
PKN1-211ENST00000588200 FOXO3O43524 673 aa19.68■□□□□ 0.74
PKN1-211ENST00000588200 ADGRB1O14514 1584 aa19.67■□□□□ 0.74
PKN1-211ENST00000588200 MARF1Q9Y4F3 1742 aaKnown RBP19.67■□□□□ 0.74
PKN1-211ENST00000588200 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
PKN1-211ENST00000588200 USP21Q9UK80 565 aa19.64■□□□□ 0.73
PKN1-211ENST00000588200 TRPC5Q9UL62 973 aaPredicted RBP19.64■□□□□ 0.73
PKN1-211ENST00000588200 SPATA31A3Q5VYP0 1347 aa19.64■□□□□ 0.73
PKN1-211ENST00000588200 RGS12O14924 1447 aa19.64■□□□□ 0.73
PKN1-211ENST00000588200 ADGRB2O60241 1585 aa19.64■□□□□ 0.73
PKN1-211ENST00000588200 ATRNO75882 1429 aa19.63■□□□□ 0.73
PKN1-211ENST00000588200 RGPD8O14715 1765 aaPredicted RBP19.62■□□□□ 0.73
PKN1-211ENST00000588200 EP400Q96L91 3159 aa19.62■□□□□ 0.73
PKN1-211ENST00000588200 BCL9LQ86UU0 1499 aa19.61■□□□□ 0.73
PKN1-211ENST00000588200 ANKARQ7Z5J8 1434 aa19.61■□□□□ 0.73
PKN1-211ENST00000588200 PRAM1Q96QH2 718 aa19.61■□□□□ 0.73
PKN1-211ENST00000588200 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.6■□□□□ 0.73
PKN1-211ENST00000588200 NUTM2FA1L443 756 aa19.6■□□□□ 0.73
PKN1-211ENST00000588200 PHF8Q9UPP1 1060 aa19.6■□□□□ 0.73
PKN1-211ENST00000588200 SBNO1A3KN83 1393 aa19.59■□□□□ 0.73
PKN1-211ENST00000588200 KRT28Q7Z3Y7 464 aa19.59■□□□□ 0.73
PKN1-211ENST00000588200 PSME1Q06323 249 aa19.58■□□□□ 0.72
PKN1-211ENST00000588200 USP32Q8NFA0 1604 aa19.58■□□□□ 0.72
PKN1-211ENST00000588200 XPCQ01831 940 aaPredicted RBP19.57■□□□□ 0.72
PKN1-211ENST00000588200 TNS3Q68CZ2 1445 aa19.57■□□□□ 0.72
PKN1-211ENST00000588200 SLIT2O94813 1529 aa19.56■□□□□ 0.72
PKN1-211ENST00000588200 DCAF11Q8TEB1 546 aa19.56■□□□□ 0.72
PKN1-211ENST00000588200 POGKQ9P215 609 aa19.56■□□□□ 0.72
PKN1-211ENST00000588200 EIF3AQ14152 1382 aaKnown RBP19.56■□□□□ 0.72
PKN1-211ENST00000588200 TRAK1Q9UPV9 953 aa19.53■□□□□ 0.72
PKN1-211ENST00000588200 ARHGEF10O15013 1369 aa19.53■□□□□ 0.72
PKN1-211ENST00000588200 ATAD2Q6PL18 1390 aa19.53■□□□□ 0.72
PKN1-211ENST00000588200 GJD4Q96KN9 370 aaPredicted RBP19.52■□□□□ 0.72
PKN1-211ENST00000588200 TULP4Q9NRJ4 1543 aa19.51■□□□□ 0.71
PKN1-211ENST00000588200 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
PKN1-211ENST00000588200 UNC5CLQ8IV45 518 aa19.51■□□□□ 0.71
PKN1-211ENST00000588200 WASLO00401 505 aaPredicted RBP19.5■□□□□ 0.71
PKN1-211ENST00000588200 SAFB2Q14151 953 aaKnown RBP eCLIP19.5■□□□□ 0.71
PKN1-211ENST00000588200 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
PKN1-211ENST00000588200 TRPM3Q9HCF6 1732 aaPredicted RBP19.5■□□□□ 0.71
PKN1-211ENST00000588200 NWD2Q9ULI1 1742 aa19.5■□□□□ 0.71
PKN1-211ENST00000588200 ARHGEF28Q8N1W1 1705 aaKnown RBP19.49■□□□□ 0.71
PKN1-211ENST00000588200 ABCA3Q99758 1704 aa19.48■□□□□ 0.71
PKN1-211ENST00000588200 CCDC125Q86Z20 511 aa19.48■□□□□ 0.71
PKN1-211ENST00000588200 ALS2Q96Q42 1657 aa19.47■□□□□ 0.71
PKN1-211ENST00000588200 SRCAPQ6ZRS2 3230 aa19.47■□□□□ 0.71
PKN1-211ENST00000588200 PRR36Q9H6K5 1346 aa19.47■□□□□ 0.71
PKN1-211ENST00000588200 GLI3P10071 1580 aa19.46■□□□□ 0.71
PKN1-211ENST00000588200 ONECUT3O60422 494 aaPredicted RBP19.45■□□□□ 0.7
PKN1-211ENST00000588200 PMFBP1Q8TBY8 1022 aa19.45■□□□□ 0.7
PKN1-211ENST00000588200 RALGAPBQ86X10 1494 aa19.45■□□□□ 0.7
PKN1-211ENST00000588200 GPRASP1Q5JY77 1395 aa19.44■□□□□ 0.7
PKN1-211ENST00000588200 VPS72Q15906 364 aa19.44■□□□□ 0.7
PKN1-211ENST00000588200 HIRIP3Q9BW71 556 aaPredicted RBP19.44■□□□□ 0.7
PKN1-211ENST00000588200 ITSN1Q15811 1721 aa19.44■□□□□ 0.7
PKN1-211ENST00000588200 MINK1Q8N4C8 1332 aaPredicted RBP19.44■□□□□ 0.7
PKN1-211ENST00000588200 PLCH1Q4KWH8 1693 aa19.43■□□□□ 0.7
PKN1-211ENST00000588200 ATP7BP35670 1465 aa19.42■□□□□ 0.7
PKN1-211ENST00000588200 CABLES1Q8TDN4 633 aa19.41■□□□□ 0.7
PKN1-211ENST00000588200 HAP1P54257 671 aaPredicted RBP19.4■□□□□ 0.7
PKN1-211ENST00000588200 CRYBG1Q9Y4K1 1723 aa19.39■□□□□ 0.7
PKN1-211ENST00000588200 FAM83GA6ND36 823 aa19.39■□□□□ 0.69
PKN1-211ENST00000588200 NUDT16Q96DE0 195 aaKnown RBP19.39■□□□□ 0.69
PKN1-211ENST00000588200 COL14A1Q05707 1796 aaKnown RBP19.38■□□□□ 0.69
PKN1-211ENST00000588200 NRAPQ86VF7 1730 aa19.37■□□□□ 0.69
PKN1-211ENST00000588200 TOPAZ1Q8N9V7 1692 aa19.37■□□□□ 0.69
PKN1-211ENST00000588200 POLR3AO14802 1390 aaPredicted RBP19.37■□□□□ 0.69
PKN1-211ENST00000588200 LMOD2Q6P5Q4 547 aa19.37■□□□□ 0.69
PKN1-211ENST00000588200 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms