RNA–Protein interactions for RNA: ENST00000588199.5

AFMID-207, Transcript of arylformamidase, human

TSL 5

Gene AFMID, Length 778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFMID-207	ENST00000588199	NCOA3	Q9Y6Q9	1424 aa		15.77	■□□□□ 0.12
AFMID-207	ENST00000588199	CARD11	Q9BXL7	1154 aa		15.77	■□□□□ 0.12
AFMID-207	ENST00000588199	DLC1	Q96QB1	1528 aa		15.77	■□□□□ 0.11
AFMID-207	ENST00000588199	ARHGEF28	Q8N1W1	1705 aa	Known RBP	15.77	■□□□□ 0.11
AFMID-207	ENST00000588199	FAM135B	Q49AJ0	1406 aa		15.77	■□□□□ 0.11
AFMID-207	ENST00000588199	GPRASP1	Q5JY77	1395 aa		15.76	■□□□□ 0.11
AFMID-207	ENST00000588199	SCAF1	Q9H7N4	1312 aa	Known RBP	15.76	■□□□□ 0.11
AFMID-207	ENST00000588199	NUTM2F	A1L443	756 aa		15.76	■□□□□ 0.11
AFMID-207	ENST00000588199	FBXO41	Q8TF61	875 aa		15.76	■□□□□ 0.11
AFMID-207	ENST00000588199	TOM1	O60784	492 aa		15.75	■□□□□ 0.11
AFMID-207	ENST00000588199	ATF3	P18847	181 aa		15.75	■□□□□ 0.11
AFMID-207	ENST00000588199	ILDR1	Q86SU0	546 aa	Predicted RBP	15.75	■□□□□ 0.11
AFMID-207	ENST00000588199	SLAIN2	Q9P270	581 aa		15.74	■□□□□ 0.11
AFMID-207	ENST00000588199	CADPS2	Q86UW7	1296 aa		15.72	■□□□□ 0.11
AFMID-207	ENST00000588199	MST1R	Q04912	1400 aa		15.71	■□□□□ 0.11
AFMID-207	ENST00000588199	CENPJ	Q9HC77	1338 aa	Predicted RBP	15.7	■□□□□ 0.1
AFMID-207	ENST00000588199	ORAI2	Q96SN7	254 aa		15.7	■□□□□ 0.1
AFMID-207	ENST00000588199	DDX17	Q92841	729 aa	Known RBP	15.69	■□□□□ 0.1
AFMID-207	ENST00000588199	DCC	P43146	1447 aa		15.68	■□□□□ 0.1
AFMID-207	ENST00000588199	C1orf167	Q5SNV9	1468 aa		15.68	■□□□□ 0.1
AFMID-207	ENST00000588199	ST20-MTHFS	A0A0A6YYL1	179 aa		15.68	■□□□□ 0.1
AFMID-207	ENST00000588199	CDC42BPG	Q6DT37	1551 aa		15.67	■□□□□ 0.1
AFMID-207	ENST00000588199	WASL	O00401	505 aa	Predicted RBP	15.67	■□□□□ 0.1
AFMID-207	ENST00000588199	BRINP3	Q76B58	766 aa		15.67	■□□□□ 0.1
AFMID-207	ENST00000588199	CDK19	Q9BWU1	502 aa		15.67	■□□□□ 0.1
AFMID-207	ENST00000588199	PRR36	Q9H6K5	1346 aa		15.67	■□□□□ 0.1
AFMID-207	ENST00000588199	QRICH2	Q9H0J4	1663 aa		15.67	■□□□□ 0.1
AFMID-207	ENST00000588199	HSPA1L	P34931	641 aa		15.66	■□□□□ 0.1
AFMID-207	ENST00000588199	ROBO1	Q9Y6N7	1651 aa		15.66	■□□□□ 0.1
AFMID-207	ENST00000588199	FMN2	Q9NZ56	1722 aa		15.65	■□□□□ 0.1
AFMID-207	ENST00000588199	USP47	Q96K76	1375 aa		15.65	■□□□□ 0.1
AFMID-207	ENST00000588199	RGPD8	O14715	1765 aa	Predicted RBP	15.65	■□□□□ 0.1
AFMID-207	ENST00000588199	ESCO1	Q5FWF5	840 aa		15.65	■□□□□ 0.1
AFMID-207	ENST00000588199	CABP2	Q9NPB3	220 aa		15.65	■□□□□ 0.1
AFMID-207	ENST00000588199	ADGRB2	O60241	1585 aa		15.65	■□□□□ 0.1
AFMID-207	ENST00000588199	TESK2	Q96S53	571 aa		15.64	■□□□□ 0.09
AFMID-207	ENST00000588199	USP32	Q8NFA0	1604 aa		15.64	■□□□□ 0.09
AFMID-207	ENST00000588199	TULP4	Q9NRJ4	1543 aa		15.63	■□□□□ 0.09
AFMID-207	ENST00000588199	EIF3A	Q14152	1382 aa	Known RBP	15.63	■□□□□ 0.09
AFMID-207	ENST00000588199	NUDT16	Q96DE0	195 aa	Known RBP	15.62	■□□□□ 0.09
AFMID-207	ENST00000588199	HSPA5	P11021	654 aa	Known RBP	15.61	■□□□□ 0.09
AFMID-207	ENST00000588199	SRPK2	P78362	688 aa	Known RBP	15.61	■□□□□ 0.09
AFMID-207	ENST00000588199	XPC	Q01831	940 aa	Predicted RBP	15.61	■□□□□ 0.09
AFMID-207	ENST00000588199	PMFBP1	Q8TBY8	1022 aa		15.61	■□□□□ 0.09
AFMID-207	ENST00000588199	FOXO3	O43524	673 aa		15.6	■□□□□ 0.09
AFMID-207	ENST00000588199	PHF8	Q9UPP1	1060 aa		15.58	■□□□□ 0.08
AFMID-207	ENST00000588199	EVC2	Q86UK5	1308 aa		15.58	■□□□□ 0.08
AFMID-207	ENST00000588199	ATP7B	P35670	1465 aa		15.58	■□□□□ 0.08
AFMID-207	ENST00000588199	DISP3	Q9P2K9	1392 aa		15.57	■□□□□ 0.08
AFMID-207	ENST00000588199	ANKAR	Q7Z5J8	1434 aa		15.57	■□□□□ 0.08
AFMID-207	ENST00000588199	EIF4G2	P78344	907 aa	Known RBP eCLIP	15.56	■□□□□ 0.08
AFMID-207	ENST00000588199	PHLPP1	O60346	1717 aa		15.55	■□□□□ 0.08
AFMID-207	ENST00000588199	SBNO2	Q9Y2G9	1366 aa		15.55	■□□□□ 0.08
AFMID-207	ENST00000588199	CABP1	Q9NZU7	370 aa		15.55	■□□□□ 0.08
AFMID-207	ENST00000588199	C11orf95	C9JLR9	678 aa	Predicted RBP	15.54	■□□□□ 0.08
AFMID-207	ENST00000588199	CCDC61	Q9Y6R9	512 aa		15.54	■□□□□ 0.08
AFMID-207	ENST00000588199	NHSL1	Q5SYE7	1610 aa		15.54	■□□□□ 0.08
AFMID-207	ENST00000588199	AHDC1	Q5TGY3	1603 aa	Predicted RBP	15.54	■□□□□ 0.08
AFMID-207	ENST00000588199	COL16A1	Q07092	1604 aa	Predicted RBP	15.53	■□□□□ 0.08
AFMID-207	ENST00000588199	PPIP5K1	Q6PFW1	1433 aa		15.52	■□□□□ 0.08
AFMID-207	ENST00000588199	ACE	P12821	1306 aa		15.52	■□□□□ 0.08
AFMID-207	ENST00000588199	TOPAZ1	Q8N9V7	1692 aa		15.52	■□□□□ 0.08
AFMID-207	ENST00000588199	KRT28	Q7Z3Y7	464 aa		15.52	■□□□□ 0.08
AFMID-207	ENST00000588199	SOS2	Q07890	1332 aa	Predicted RBP	15.51	■□□□□ 0.07
AFMID-207	ENST00000588199	PLEKHG3	A1L390	1219 aa		15.51	■□□□□ 0.07
AFMID-207	ENST00000588199	NGDN	Q8NEJ9	315 aa	Known RBP	15.51	■□□□□ 0.07
AFMID-207	ENST00000588199	SLC12A5	Q9H2X9	1139 aa		15.51	■□□□□ 0.07
AFMID-207	ENST00000588199	PXDN	Q92626	1479 aa		15.51	■□□□□ 0.07
AFMID-207	ENST00000588199	NPHP3	Q7Z494	1330 aa		15.5	■□□□□ 0.07
AFMID-207	ENST00000588199	TMF1	P82094	1093 aa		15.5	■□□□□ 0.07
AFMID-207	ENST00000588199	PSME1	Q06323	249 aa		15.5	■□□□□ 0.07
AFMID-207	ENST00000588199	TMC1	Q8TDI8	760 aa		15.5	■□□□□ 0.07
AFMID-207	ENST00000588199	KIF1A	Q12756	1690 aa		15.49	■□□□□ 0.07
AFMID-207	ENST00000588199	PLEKHG5	O94827	1062 aa		15.49	■□□□□ 0.07
AFMID-207	ENST00000588199	POLR3GL	Q9BT43	218 aa		15.49	■□□□□ 0.07
AFMID-207	ENST00000588199	ITSN1	Q15811	1721 aa		15.47	■□□□□ 0.07
AFMID-207	ENST00000588199	POLR3A	O14802	1390 aa	Predicted RBP	15.47	■□□□□ 0.07
AFMID-207	ENST00000588199	ATAD2	Q6PL18	1390 aa		15.47	■□□□□ 0.07
AFMID-207	ENST00000588199	LRRC59	Q96AG4	307 aa	Known RBP	15.46	■□□□□ 0.07
AFMID-207	ENST00000588199	PAK3	O75914	559 aa	Predicted RBP	15.45	■□□□□ 0.06
AFMID-207	ENST00000588199	NUTM2G	Q5VZR2	741 aa		15.45	■□□□□ 0.06
AFMID-207	ENST00000588199	LMOD2	Q6P5Q4	547 aa		15.45	■□□□□ 0.06
AFMID-207	ENST00000588199	CD163L1	Q9NR16	1453 aa		15.45	■□□□□ 0.06
AFMID-207	ENST00000588199	SPATA31A3	Q5VYP0	1347 aa		15.44	■□□□□ 0.06
AFMID-207	ENST00000588199	PUS7	Q96PZ0	661 aa	Known RBP	15.44	■□□□□ 0.06
AFMID-207	ENST00000588199	PNPLA6	Q8IY17	1366 aa		15.44	■□□□□ 0.06
AFMID-207	ENST00000588199	TRPM3	Q9HCF6	1732 aa	Predicted RBP	15.43	■□□□□ 0.06
AFMID-207	ENST00000588199	NUTM2B	A6NNL0	878 aa	Predicted RBP	15.43	■□□□□ 0.06
AFMID-207	ENST00000588199	NUTM2E	B1AL46	878 aa	Predicted RBP	15.43	■□□□□ 0.06
AFMID-207	ENST00000588199	NUTM2A	Q8IVF1	878 aa	Predicted RBP	15.43	■□□□□ 0.06
AFMID-207	ENST00000588199	CABLES1	Q8TDN4	633 aa		15.43	■□□□□ 0.06
AFMID-207	ENST00000588199	JCAD	Q9P266	1359 aa		15.43	■□□□□ 0.06
AFMID-207	ENST00000588199	CPSF1	Q10570	1443 aa	Known RBP	15.42	■□□□□ 0.06
AFMID-207	ENST00000588199	SBNO1	A3KN83	1393 aa		15.41	■□□□□ 0.06
AFMID-207	ENST00000588199	SLC24A1	O60721	1099 aa		15.41	■□□□□ 0.06
AFMID-207	ENST00000588199	USP6	P35125	1406 aa		15.41	■□□□□ 0.06
AFMID-207	ENST00000588199	TNS3	Q68CZ2	1445 aa		15.41	■□□□□ 0.06
AFMID-207	ENST00000588199	KIF7	Q2M1P5	1343 aa		15.41	■□□□□ 0.06
AFMID-207	ENST00000588199		A0A1W2PP64	1363 aa		15.4	■□□□□ 0.06
AFMID-207	ENST00000588199	KTN1	Q86UP2	1357 aa	Known RBP	15.4	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms