RNA–Protein interactions for RNA: ENST00000587905.5

LDLRAD4-212, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 5

Gene LDLRAD4, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-212ENST00000587905 POGKQ9P215 609 aa29.37■■■□□ 2.29
LDLRAD4-212ENST00000587905 TONSLQ96HA7 1378 aa29.37■■■□□ 2.29
LDLRAD4-212ENST00000587905 PHLPP1O60346 1717 aa29.36■■■□□ 2.29
LDLRAD4-212ENST00000587905 CDC42BPGQ6DT37 1551 aa29.35■■■□□ 2.29
LDLRAD4-212ENST00000587905 SIRT1Q96EB6 747 aa29.35■■■□□ 2.29
LDLRAD4-212ENST00000587905 BRINP3Q76B58 766 aa29.34■■■□□ 2.29
LDLRAD4-212ENST00000587905 NBPF1Q3BBV0 1214 aa29.33■■■□□ 2.29
LDLRAD4-212ENST00000587905 C1orf167Q5SNV9 1468 aa29.32■■■□□ 2.28
LDLRAD4-212ENST00000587905 NUTM2FA1L443 756 aa29.31■■■□□ 2.28
LDLRAD4-212ENST00000587905 ARHGEF28Q8N1W1 1705 aaKnown RBP29.31■■■□□ 2.28
LDLRAD4-212ENST00000587905 TRPM1Q7Z4N2 1603 aa29.28■■■□□ 2.28
LDLRAD4-212ENST00000587905 FMN2Q9NZ56 1722 aa29.26■■■□□ 2.27
LDLRAD4-212ENST00000587905 ORAI2Q96SN7 254 aa29.26■■■□□ 2.27
LDLRAD4-212ENST00000587905 AHDC1Q5TGY3 1603 aaPredicted RBP29.26■■■□□ 2.27
LDLRAD4-212ENST00000587905 MINK1Q8N4C8 1332 aaPredicted RBP29.25■■■□□ 2.27
LDLRAD4-212ENST00000587905 HIRIP3Q9BW71 556 aaPredicted RBP29.25■■■□□ 2.27
LDLRAD4-212ENST00000587905 COL16A1Q07092 1604 aaPredicted RBP29.24■■■□□ 2.27
LDLRAD4-212ENST00000587905 NBPF8Q3BBV2 869 aa29.23■■■□□ 2.27
LDLRAD4-212ENST00000587905 DDX17Q92841 729 aaKnown RBP29.23■■■□□ 2.27
LDLRAD4-212ENST00000587905 NHSL1Q5SYE7 1610 aa29.23■■■□□ 2.27
LDLRAD4-212ENST00000587905 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
LDLRAD4-212ENST00000587905 ROCK2O75116 1388 aaKnown RBP29.21■■■□□ 2.27
LDLRAD4-212ENST00000587905 CCER1Q8TC90 406 aaPredicted RBP29.2■■■□□ 2.26
LDLRAD4-212ENST00000587905 ADGRB2O60241 1585 aa29.19■■■□□ 2.26
LDLRAD4-212ENST00000587905 RGPD8O14715 1765 aaPredicted RBP29.18■■■□□ 2.26
LDLRAD4-212ENST00000587905 MED1Q15648 1581 aaPredicted RBP29.17■■■□□ 2.26
LDLRAD4-212ENST00000587905 DISP3Q9P2K9 1392 aa29.15■■■□□ 2.26
LDLRAD4-212ENST00000587905 CLSPNQ9HAW4 1339 aa29.14■■■□□ 2.25
LDLRAD4-212ENST00000587905 JCADQ9P266 1359 aa29.13■■■□□ 2.25
LDLRAD4-212ENST00000587905 WASLO00401 505 aaPredicted RBP29.11■■■□□ 2.25
LDLRAD4-212ENST00000587905 CENPJQ9HC77 1338 aaPredicted RBP29.11■■■□□ 2.25
LDLRAD4-212ENST00000587905 QRICH2Q9H0J4 1663 aa29.11■■■□□ 2.25
LDLRAD4-212ENST00000587905 USP32Q8NFA0 1604 aa29.1■■■□□ 2.25
LDLRAD4-212ENST00000587905 KIF1AQ12756 1690 aa29.09■■■□□ 2.25
LDLRAD4-212ENST00000587905 FOXO3O43524 673 aa29.09■■■□□ 2.25
LDLRAD4-212ENST00000587905 RALGAPBQ86X10 1494 aa29.09■■■□□ 2.25
LDLRAD4-212ENST00000587905 XPCQ01831 940 aaPredicted RBP29.08■■■□□ 2.25
LDLRAD4-212ENST00000587905 EIF3AQ14152 1382 aaKnown RBP29.08■■■□□ 2.25
LDLRAD4-212ENST00000587905 SHPRHQ149N8 1683 aa29.07■■■□□ 2.24
LDLRAD4-212ENST00000587905 NPHP3Q7Z494 1330 aa29.07■■■□□ 2.24
LDLRAD4-212ENST00000587905 ANKARQ7Z5J8 1434 aa29.07■■■□□ 2.24
LDLRAD4-212ENST00000587905 LRRC59Q96AG4 307 aaKnown RBP29.07■■■□□ 2.24
LDLRAD4-212ENST00000587905 CARD11Q9BXL7 1154 aa29.07■■■□□ 2.24
LDLRAD4-212ENST00000587905 TULP4Q9NRJ4 1543 aa29.07■■■□□ 2.24
LDLRAD4-212ENST00000587905 PHF8Q9UPP1 1060 aa29.06■■■□□ 2.24
LDLRAD4-212ENST00000587905 GPRASP1Q5JY77 1395 aa29.05■■■□□ 2.24
LDLRAD4-212ENST00000587905 SOS2Q07890 1332 aaPredicted RBP29.04■■■□□ 2.24
LDLRAD4-212ENST00000587905 PRR36Q9H6K5 1346 aa29.04■■■□□ 2.24
LDLRAD4-212ENST00000587905 CDK19Q9BWU1 502 aa29.04■■■□□ 2.24
LDLRAD4-212ENST00000587905 PMFBP1Q8TBY8 1022 aa29.03■■■□□ 2.24
LDLRAD4-212ENST00000587905 PHF23Q9BUL5 403 aaPredicted RBP29.02■■■□□ 2.24
LDLRAD4-212ENST00000587905 PXDNQ92626 1479 aa29.01■■■□□ 2.23
LDLRAD4-212ENST00000587905 SPATA31A6Q5VVP1 1343 aa28.99■■■□□ 2.23
LDLRAD4-212ENST00000587905 NUTM2BA6NNL0 878 aaPredicted RBP28.99■■■□□ 2.23
LDLRAD4-212ENST00000587905 NUTM2EB1AL46 878 aaPredicted RBP28.99■■■□□ 2.23
LDLRAD4-212ENST00000587905 NUTM2AQ8IVF1 878 aaPredicted RBP28.99■■■□□ 2.23
LDLRAD4-212ENST00000587905 ITSN1Q15811 1721 aa28.99■■■□□ 2.23
LDLRAD4-212ENST00000587905 PNPLA6Q8IY17 1366 aa28.99■■■□□ 2.23
LDLRAD4-212ENST00000587905 ATP7BP35670 1465 aa28.98■■■□□ 2.23
LDLRAD4-212ENST00000587905 SRPK2P78362 688 aaKnown RBP28.98■■■□□ 2.23
LDLRAD4-212ENST00000587905 NUDT16Q96DE0 195 aaKnown RBP28.98■■■□□ 2.23
LDLRAD4-212ENST00000587905 KRT28Q7Z3Y7 464 aa28.97■■■□□ 2.23
LDLRAD4-212ENST00000587905 TIMELESSQ9UNS1 1208 aa28.97■■■□□ 2.23
LDLRAD4-212ENST00000587905 LRP6O75581 1613 aa28.95■■■□□ 2.23
LDLRAD4-212ENST00000587905 PSME1Q06323 249 aa28.94■■■□□ 2.22
LDLRAD4-212ENST00000587905 MEX3CQ5U5Q3 659 aaKnown RBP28.94■■■□□ 2.22
LDLRAD4-212ENST00000587905 CABP2Q9NPB3 220 aa28.94■■■□□ 2.22
LDLRAD4-212ENST00000587905 NGDNQ8NEJ9 315 aaKnown RBP28.92■■■□□ 2.22
LDLRAD4-212ENST00000587905 TOPAZ1Q8N9V7 1692 aa28.91■■■□□ 2.22
LDLRAD4-212ENST00000587905 EVC2Q86UK5 1308 aa28.91■■■□□ 2.22
LDLRAD4-212ENST00000587905 CCDC61Q9Y6R9 512 aa28.88■■■□□ 2.21
LDLRAD4-212ENST00000587905 LMOD2Q6P5Q4 547 aa28.87■■■□□ 2.21
LDLRAD4-212ENST00000587905 SPATA31A3Q5VYP0 1347 aa28.87■■■□□ 2.21
LDLRAD4-212ENST00000587905 PLEKHG5O94827 1062 aa28.86■■■□□ 2.21
LDLRAD4-212ENST00000587905 COL22A1Q8NFW1 1626 aaPredicted RBP28.86■■■□□ 2.21
LDLRAD4-212ENST00000587905 TNS3Q68CZ2 1445 aa28.86■■■□□ 2.21
LDLRAD4-212ENST00000587905 PPIP5K1Q6PFW1 1433 aa28.85■■■□□ 2.21
LDLRAD4-212ENST00000587905 ADAMTS2O95450 1211 aa28.84■■■□□ 2.21
LDLRAD4-212ENST00000587905 TRPM3Q9HCF6 1732 aaPredicted RBP28.83■■■□□ 2.21
LDLRAD4-212ENST00000587905 SBNO1A3KN83 1393 aa28.82■■■□□ 2.2
LDLRAD4-212ENST00000587905 SBNO2Q9Y2G9 1366 aa28.82■■■□□ 2.2
LDLRAD4-212ENST00000587905 ACEP12821 1306 aa28.81■■■□□ 2.2
LDLRAD4-212ENST00000587905 ST20-MTHFSA0A0A6YYL1 179 aa28.81■■■□□ 2.2
LDLRAD4-212ENST00000587905 PAK3O75914 559 aaPredicted RBP28.81■■■□□ 2.2
LDLRAD4-212ENST00000587905 USP47Q96K76 1375 aa28.8■■■□□ 2.2
LDLRAD4-212ENST00000587905 ILDR2Q71H61 639 aa28.8■■■□□ 2.2
LDLRAD4-212ENST00000587905 RGS17Q9UGC6 210 aaPredicted RBP28.8■■■□□ 2.2
LDLRAD4-212ENST00000587905 PLEKHG3A1L390 1219 aa28.79■■■□□ 2.2
LDLRAD4-212ENST00000587905 C8orf37Q96NL8 207 aa28.78■■■□□ 2.2
LDLRAD4-212ENST00000587905 CABP1Q9NZU7 370 aa28.78■■■□□ 2.2
LDLRAD4-212ENST00000587905 POLR3AO14802 1390 aaPredicted RBP28.77■■■□□ 2.2
LDLRAD4-212ENST00000587905 ARHGEF10O15013 1369 aa28.76■■■□□ 2.2
LDLRAD4-212ENST00000587905 HAP1P54257 671 aaPredicted RBP28.76■■■□□ 2.19
LDLRAD4-212ENST00000587905 ALS2Q96Q42 1657 aa28.75■■■□□ 2.19
LDLRAD4-212ENST00000587905 CABLES1Q8TDN4 633 aa28.75■■■□□ 2.19
LDLRAD4-212ENST00000587905 ATAD2Q6PL18 1390 aa28.74■■■□□ 2.19
LDLRAD4-212ENST00000587905 TESK2Q96S53 571 aa28.72■■■□□ 2.19
LDLRAD4-212ENST00000587905 AFF2P51816 1311 aa28.71■■■□□ 2.19
LDLRAD4-212ENST00000587905 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
LDLRAD4-212ENST00000587905 MARF1Q9Y4F3 1742 aaKnown RBP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms