RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 NAIPQ13075 1403 aa23.53■■□□□ 1.36
NCLN-203ENST00000587740 MYOM2P54296 1465 aa23.52■■□□□ 1.36
NCLN-203ENST00000587740 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
NCLN-203ENST00000587740 BCL9LQ86UU0 1499 aa23.49■■□□□ 1.35
NCLN-203ENST00000587740 RPGRIP1LQ68CZ1 1315 aa23.49■■□□□ 1.35
NCLN-203ENST00000587740 PXDNQ92626 1479 aa23.49■■□□□ 1.35
NCLN-203ENST00000587740 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
NCLN-203ENST00000587740 PPLO60437 1756 aa23.47■■□□□ 1.35
NCLN-203ENST00000587740 NPHP3Q7Z494 1330 aa23.47■■□□□ 1.35
NCLN-203ENST00000587740 XPCQ01831 940 aaPredicted RBP23.46■■□□□ 1.35
NCLN-203ENST00000587740 CDC42BPGQ6DT37 1551 aa23.45■■□□□ 1.34
NCLN-203ENST00000587740 FOXO3O43524 673 aa23.45■■□□□ 1.34
NCLN-203ENST00000587740 MARF1Q9Y4F3 1742 aaKnown RBP23.44■■□□□ 1.34
NCLN-203ENST00000587740 ZRANB1Q9UGI0 708 aa23.43■■□□□ 1.34
NCLN-203ENST00000587740 GJD4Q96KN9 370 aaPredicted RBP23.42■■□□□ 1.34
NCLN-203ENST00000587740 WAPLQ7Z5K2 1190 aa23.41■■□□□ 1.34
NCLN-203ENST00000587740 ADGRF5Q8IZF2 1346 aa23.4■■□□□ 1.34
NCLN-203ENST00000587740 NUTM2FA1L443 756 aa23.4■■□□□ 1.34
NCLN-203ENST00000587740 SLC4A1APQ9BWU0 796 aaKnown RBP23.4■■□□□ 1.34
NCLN-203ENST00000587740 CCDC125Q86Z20 511 aa23.39■■□□□ 1.33
NCLN-203ENST00000587740 FOXD1Q16676 465 aa23.38■■□□□ 1.33
NCLN-203ENST00000587740 STK26Q9P289 416 aa23.37■■□□□ 1.33
NCLN-203ENST00000587740 TECPR2O15040 1411 aa23.36■■□□□ 1.33
NCLN-203ENST00000587740 PLEKHH1Q9ULM0 1364 aa23.36■■□□□ 1.33
NCLN-203ENST00000587740 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.35■■□□□ 1.33
NCLN-203ENST00000587740 GLI3P10071 1580 aa23.35■■□□□ 1.33
NCLN-203ENST00000587740 SLIT2O94813 1529 aa23.34■■□□□ 1.33
NCLN-203ENST00000587740 UNC5CLQ8IV45 518 aa23.34■■□□□ 1.33
NCLN-203ENST00000587740 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
NCLN-203ENST00000587740 RALGAPBQ86X10 1494 aa23.34■■□□□ 1.33
NCLN-203ENST00000587740 SPATA31A3Q5VYP0 1347 aa23.33■■□□□ 1.33
NCLN-203ENST00000587740 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
NCLN-203ENST00000587740 ABCC11Q96J66 1382 aa23.32■■□□□ 1.32
NCLN-203ENST00000587740 RGL3Q3MIN7 710 aa23.31■■□□□ 1.32
NCLN-203ENST00000587740 SPATA31E1Q6ZUB1 1445 aa23.31■■□□□ 1.32
NCLN-203ENST00000587740 BRWD3Q6RI45 1802 aa23.29■■□□□ 1.32
NCLN-203ENST00000587740 FMN2Q9NZ56 1722 aa23.29■■□□□ 1.32
NCLN-203ENST00000587740 KNDC1Q76NI1 1749 aa23.28■■□□□ 1.32
NCLN-203ENST00000587740 BLMP54132 1417 aaPredicted RBP23.28■■□□□ 1.32
NCLN-203ENST00000587740 KRT28Q7Z3Y7 464 aa23.28■■□□□ 1.32
NCLN-203ENST00000587740 DEFB132Q7Z7B7 95 aa23.28■■□□□ 1.32
NCLN-203ENST00000587740 IFT172Q9UG01 1749 aa23.28■■□□□ 1.32
NCLN-203ENST00000587740 USP32Q8NFA0 1604 aa23.26■■□□□ 1.31
NCLN-203ENST00000587740 ANKRD30BQ9BXX2 1392 aa23.26■■□□□ 1.31
NCLN-203ENST00000587740 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
NCLN-203ENST00000587740 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
NCLN-203ENST00000587740 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
NCLN-203ENST00000587740 SEPT12Q8IYM1 358 aa23.24■■□□□ 1.31
NCLN-203ENST00000587740 CABLES1Q8TDN4 633 aa23.24■■□□□ 1.31
NCLN-203ENST00000587740 RGPD8O14715 1765 aaPredicted RBP23.24■■□□□ 1.31
NCLN-203ENST00000587740 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
NCLN-203ENST00000587740 VPS72Q15906 364 aa23.21■■□□□ 1.31
NCLN-203ENST00000587740 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
NCLN-203ENST00000587740 ONECUT3O60422 494 aaPredicted RBP23.2■■□□□ 1.3
NCLN-203ENST00000587740 SIRT1Q96EB6 747 aa23.2■■□□□ 1.3
NCLN-203ENST00000587740 PHF8Q9UPP1 1060 aa23.2■■□□□ 1.3
NCLN-203ENST00000587740 PLEKHG5O94827 1062 aa23.19■■□□□ 1.3
NCLN-203ENST00000587740 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
NCLN-203ENST00000587740 PLCH1Q4KWH8 1693 aa23.18■■□□□ 1.3
NCLN-203ENST00000587740 C14orf93Q9H972 538 aaKnown RBP23.17■■□□□ 1.3
NCLN-203ENST00000587740 NWD2Q9ULI1 1742 aa23.16■■□□□ 1.3
NCLN-203ENST00000587740 HAP1P54257 671 aaPredicted RBP23.16■■□□□ 1.3
NCLN-203ENST00000587740 PSME1Q06323 249 aa23.16■■□□□ 1.3
NCLN-203ENST00000587740 NRXN1Q9ULB1 1477 aa23.16■■□□□ 1.3
NCLN-203ENST00000587740 SBNO1A3KN83 1393 aa23.15■■□□□ 1.3
NCLN-203ENST00000587740 FAM83GA6ND36 823 aa23.15■■□□□ 1.3
NCLN-203ENST00000587740 KRT27Q7Z3Y8 459 aa23.15■■□□□ 1.3
NCLN-203ENST00000587740 ABCA3Q99758 1704 aa23.15■■□□□ 1.3
NCLN-203ENST00000587740 SF3B2Q13435 895 aaKnown RBP23.14■■□□□ 1.29
NCLN-203ENST00000587740 CCDC9Q9Y3X0 531 aaKnown RBP23.14■■□□□ 1.29
NCLN-203ENST00000587740 CFAP70Q5T0N1 1121 aa23.13■■□□□ 1.29
NCLN-203ENST00000587740 TRIM26Q12899 539 aaPredicted RBP23.12■■□□□ 1.29
NCLN-203ENST00000587740 SAFB2Q14151 953 aaKnown RBP eCLIP23.12■■□□□ 1.29
NCLN-203ENST00000587740 LMOD2Q6P5Q4 547 aa23.12■■□□□ 1.29
NCLN-203ENST00000587740 ACIN1Q9UKV3 1341 aaKnown RBP23.11■■□□□ 1.29
NCLN-203ENST00000587740 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
NCLN-203ENST00000587740 PMFBP1Q8TBY8 1022 aa23.1■■□□□ 1.29
NCLN-203ENST00000587740 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
NCLN-203ENST00000587740 DHX57Q6P158 1386 aaKnown RBP23.1■■□□□ 1.29
NCLN-203ENST00000587740 RAB3GAP2Q9H2M9 1393 aa23.1■■□□□ 1.29
NCLN-203ENST00000587740 LRP5O75197 1615 aa23.09■■□□□ 1.29
NCLN-203ENST00000587740 PSDA5PKW4 1024 aaPredicted RBP23.07■■□□□ 1.28
NCLN-203ENST00000587740 NRAPQ86VF7 1730 aa23.07■■□□□ 1.28
NCLN-203ENST00000587740 FAM98CQ17RN3 349 aaKnown RBP23.06■■□□□ 1.28
NCLN-203ENST00000587740 TRPM3Q9HCF6 1732 aaPredicted RBP23.05■■□□□ 1.28
NCLN-203ENST00000587740 A0A0G2JS52 829 aa23.04■■□□□ 1.28
NCLN-203ENST00000587740 BAG6P46379 1132 aa23.04■■□□□ 1.28
NCLN-203ENST00000587740 MYT1Q01538 1121 aa23.04■■□□□ 1.28
NCLN-203ENST00000587740 BTG4Q9NY30 223 aa23.04■■□□□ 1.28
NCLN-203ENST00000587740 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
NCLN-203ENST00000587740 HRCP23327 699 aa23.03■■□□□ 1.28
NCLN-203ENST00000587740 DLC1Q96QB1 1528 aa23.03■■□□□ 1.28
NCLN-203ENST00000587740 FAM182BQ5T319 152 aa23.02■■□□□ 1.28
NCLN-203ENST00000587740 ALS2Q96Q42 1657 aa23.01■■□□□ 1.27
NCLN-203ENST00000587740 EN1Q05925 392 aaPredicted RBP23.01■■□□□ 1.27
NCLN-203ENST00000587740 POGKQ9P215 609 aa23.01■■□□□ 1.27
NCLN-203ENST00000587740 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
NCLN-203ENST00000587740 HIRIP3Q9BW71 556 aaPredicted RBP23■■□□□ 1.27
NCLN-203ENST00000587740 ADGRB2O60241 1585 aa23■■□□□ 1.27
NCLN-203ENST00000587740 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms