RNA–Protein interactions for RNA: ENST00000587634.5

NEDD4L-219, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4L, Length 628 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-219ENST00000587634 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
NEDD4L-219ENST00000587634 SHPRHQ149N8 1683 aa16.5■□□□□ 0.23
NEDD4L-219ENST00000587634 LAMC1P11047 1609 aa16.49■□□□□ 0.23
NEDD4L-219ENST00000587634 KNDC1Q76NI1 1749 aa16.49■□□□□ 0.23
NEDD4L-219ENST00000587634 ADGRB1O14514 1584 aa16.48■□□□□ 0.23
NEDD4L-219ENST00000587634 SPATA31A6Q5VVP1 1343 aa16.47■□□□□ 0.23
NEDD4L-219ENST00000587634 CDC42BPGQ6DT37 1551 aa16.47■□□□□ 0.23
NEDD4L-219ENST00000587634 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
NEDD4L-219ENST00000587634 SOS2Q07890 1332 aaPredicted RBP16.45■□□□□ 0.22
NEDD4L-219ENST00000587634 NUTM2FA1L443 756 aa16.44■□□□□ 0.22
NEDD4L-219ENST00000587634 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
NEDD4L-219ENST00000587634 SIRT1Q96EB6 747 aa16.44■□□□□ 0.22
NEDD4L-219ENST00000587634 KDM2AQ9Y2K7 1162 aa16.44■□□□□ 0.22
NEDD4L-219ENST00000587634 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-219ENST00000587634 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-219ENST00000587634 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
NEDD4L-219ENST00000587634 LRRC59Q96AG4 307 aaKnown RBP16.42■□□□□ 0.22
NEDD4L-219ENST00000587634 PRAM1Q96QH2 718 aa16.41■□□□□ 0.22
NEDD4L-219ENST00000587634 PXDNQ92626 1479 aa16.41■□□□□ 0.22
NEDD4L-219ENST00000587634 FMN2Q9NZ56 1722 aa16.4■□□□□ 0.22
NEDD4L-219ENST00000587634 ESCO1Q5FWF5 840 aa16.4■□□□□ 0.22
NEDD4L-219ENST00000587634 DLC1Q96QB1 1528 aa16.4■□□□□ 0.22
NEDD4L-219ENST00000587634 FOXO3O43524 673 aa16.39■□□□□ 0.21
NEDD4L-219ENST00000587634 XPCQ01831 940 aaPredicted RBP16.39■□□□□ 0.21
NEDD4L-219ENST00000587634 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.21
NEDD4L-219ENST00000587634 TRAK1Q9UPV9 953 aa16.37■□□□□ 0.21
NEDD4L-219ENST00000587634 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
NEDD4L-219ENST00000587634 USP32Q8NFA0 1604 aa16.36■□□□□ 0.21
NEDD4L-219ENST00000587634 MEX3CQ5U5Q3 659 aaKnown RBP16.35■□□□□ 0.21
NEDD4L-219ENST00000587634 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
NEDD4L-219ENST00000587634 AFF2P51816 1311 aa16.34■□□□□ 0.21
NEDD4L-219ENST00000587634 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
NEDD4L-219ENST00000587634 NPHP3Q7Z494 1330 aa16.33■□□□□ 0.2
NEDD4L-219ENST00000587634 PRR36Q9H6K5 1346 aa16.33■□□□□ 0.2
NEDD4L-219ENST00000587634 ADGRB2O60241 1585 aa16.33■□□□□ 0.2
NEDD4L-219ENST00000587634 ADAMTS2O95450 1211 aa16.32■□□□□ 0.2
NEDD4L-219ENST00000587634 NBPF1Q3BBV0 1214 aa16.32■□□□□ 0.2
NEDD4L-219ENST00000587634 STAC3Q96MF2 364 aa16.32■□□□□ 0.2
NEDD4L-219ENST00000587634 C8orf37Q96NL8 207 aa16.32■□□□□ 0.2
NEDD4L-219ENST00000587634 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
NEDD4L-219ENST00000587634 MINK1Q8N4C8 1332 aaPredicted RBP16.3■□□□□ 0.2
NEDD4L-219ENST00000587634 ZNF772Q68DY9 489 aaPredicted RBP16.3■□□□□ 0.2
NEDD4L-219ENST00000587634 POGKQ9P215 609 aa16.3■□□□□ 0.2
NEDD4L-219ENST00000587634 ARHGEF28Q8N1W1 1705 aaKnown RBP16.3■□□□□ 0.2
NEDD4L-219ENST00000587634 SPATA31A3Q5VYP0 1347 aa16.29■□□□□ 0.2
NEDD4L-219ENST00000587634 PHF8Q9UPP1 1060 aa16.29■□□□□ 0.2
NEDD4L-219ENST00000587634 KRT28Q7Z3Y7 464 aa16.28■□□□□ 0.2
NEDD4L-219ENST00000587634 KIF1AQ12756 1690 aa16.27■□□□□ 0.2
NEDD4L-219ENST00000587634 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
NEDD4L-219ENST00000587634 L3MBTL2Q969R5 705 aa16.27■□□□□ 0.2
NEDD4L-219ENST00000587634 ANKARQ7Z5J8 1434 aa16.27■□□□□ 0.19
NEDD4L-219ENST00000587634 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
NEDD4L-219ENST00000587634 FNBP4Q8N3X1 1017 aaPredicted RBP16.26■□□□□ 0.19
NEDD4L-219ENST00000587634 NGLY1Q96IV0 654 aa16.25■□□□□ 0.19
NEDD4L-219ENST00000587634 QTRT2Q9H974 415 aaKnown RBP16.25■□□□□ 0.19
NEDD4L-219ENST00000587634 KIAA1210Q9ULL0 1709 aa16.25■□□□□ 0.19
NEDD4L-219ENST00000587634 BCL9LQ86UU0 1499 aa16.24■□□□□ 0.19
NEDD4L-219ENST00000587634 RXRBP28702 533 aa16.24■□□□□ 0.19
NEDD4L-219ENST00000587634 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
NEDD4L-219ENST00000587634 CABLES1Q8TDN4 633 aa16.23■□□□□ 0.19
NEDD4L-219ENST00000587634 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-219ENST00000587634 RGS12O14924 1447 aa16.22■□□□□ 0.19
NEDD4L-219ENST00000587634 TNS3Q68CZ2 1445 aa16.22■□□□□ 0.19
NEDD4L-219ENST00000587634 SBNO1A3KN83 1393 aa16.22■□□□□ 0.19
NEDD4L-219ENST00000587634 ATP7BP35670 1465 aa16.22■□□□□ 0.19
NEDD4L-219ENST00000587634 CDK12Q9NYV4 1490 aaPredicted RBP16.22■□□□□ 0.19
NEDD4L-219ENST00000587634 USP21Q9UK80 565 aa16.21■□□□□ 0.19
NEDD4L-219ENST00000587634 MARF1Q9Y4F3 1742 aaKnown RBP16.21■□□□□ 0.19
NEDD4L-219ENST00000587634 ATRNO75882 1429 aa16.2■□□□□ 0.18
NEDD4L-219ENST00000587634 NEUROD1Q13562 356 aa16.2■□□□□ 0.18
NEDD4L-219ENST00000587634 NBPF8Q3BBV2 869 aa16.19■□□□□ 0.18
NEDD4L-219ENST00000587634 CDK19Q9BWU1 502 aa16.19■□□□□ 0.18
NEDD4L-219ENST00000587634 RBM6P78332 1123 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-219ENST00000587634 PSME1Q06323 249 aa16.18■□□□□ 0.18
NEDD4L-219ENST00000587634 UPF1Q92900 1129 aaKnown RBP eCLIP16.18■□□□□ 0.18
NEDD4L-219ENST00000587634 NUDT16Q96DE0 195 aaKnown RBP16.18■□□□□ 0.18
NEDD4L-219ENST00000587634 ABCA3Q99758 1704 aa16.18■□□□□ 0.18
NEDD4L-219ENST00000587634 SLIT2O94813 1529 aa16.18■□□□□ 0.18
NEDD4L-219ENST00000587634 ALS2Q96Q42 1657 aa16.18■□□□□ 0.18
NEDD4L-219ENST00000587634 PLEKHG5O94827 1062 aa16.17■□□□□ 0.18
NEDD4L-219ENST00000587634 TRPM1Q7Z4N2 1603 aa16.16■□□□□ 0.18
NEDD4L-219ENST00000587634 TOPAZ1Q8N9V7 1692 aa16.15■□□□□ 0.18
NEDD4L-219ENST00000587634 TRPC5Q9UL62 973 aaPredicted RBP16.15■□□□□ 0.18
NEDD4L-219ENST00000587634 FAM83GA6ND36 823 aa16.14■□□□□ 0.17
NEDD4L-219ENST00000587634 CRYBG1Q9Y4K1 1723 aa16.14■□□□□ 0.17
NEDD4L-219ENST00000587634 POLR3AO14802 1390 aaPredicted RBP16.13■□□□□ 0.17
NEDD4L-219ENST00000587634 EIF3AQ14152 1382 aaKnown RBP16.13■□□□□ 0.17
NEDD4L-219ENST00000587634 LMOD2Q6P5Q4 547 aa16.13■□□□□ 0.17
NEDD4L-219ENST00000587634 GLI3P10071 1580 aa16.13■□□□□ 0.17
NEDD4L-219ENST00000587634 ARHGEF10O15013 1369 aa16.13■□□□□ 0.17
NEDD4L-219ENST00000587634 EP400Q96L91 3159 aa16.12■□□□□ 0.17
NEDD4L-219ENST00000587634 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
NEDD4L-219ENST00000587634 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.11■□□□□ 0.17
NEDD4L-219ENST00000587634 PLEKHG3A1L390 1219 aa16.11■□□□□ 0.17
NEDD4L-219ENST00000587634 TRIM26Q12899 539 aaPredicted RBP16.11■□□□□ 0.17
NEDD4L-219ENST00000587634 UNC5CLQ8IV45 518 aa16.11■□□□□ 0.17
NEDD4L-219ENST00000587634 NGDNQ8NEJ9 315 aaKnown RBP16.11■□□□□ 0.17
NEDD4L-219ENST00000587634 GJD4Q96KN9 370 aaPredicted RBP16.11■□□□□ 0.17
NEDD4L-219ENST00000587634 CABP2Q9NPB3 220 aa16.11■□□□□ 0.17
NEDD4L-219ENST00000587634 QRICH2Q9H0J4 1663 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms