RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 SIN3AQ96ST3 1273 aa21.43■■□□□ 1.02
ATG4D-207ENST00000587256 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
ATG4D-207ENST00000587256 SIRT1Q96EB6 747 aa21.4■■□□□ 1.02
ATG4D-207ENST00000587256 PRAM1Q96QH2 718 aa21.4■■□□□ 1.02
ATG4D-207ENST00000587256 KIAA1210Q9ULL0 1709 aa21.4■■□□□ 1.02
ATG4D-207ENST00000587256 NHSL1Q5SYE7 1610 aa21.4■■□□□ 1.02
ATG4D-207ENST00000587256 SAFB2Q14151 953 aaKnown RBP eCLIP21.39■■□□□ 1.01
ATG4D-207ENST00000587256 POGKQ9P215 609 aa21.39■■□□□ 1.01
ATG4D-207ENST00000587256 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.01
ATG4D-207ENST00000587256 L3MBTL2Q969R5 705 aa21.38■■□□□ 1.01
ATG4D-207ENST00000587256 JCADQ9P266 1359 aa21.37■■□□□ 1.01
ATG4D-207ENST00000587256 FMN2Q9NZ56 1722 aa21.37■■□□□ 1.01
ATG4D-207ENST00000587256 ARHGEF28Q8N1W1 1705 aaKnown RBP21.35■■□□□ 1.01
ATG4D-207ENST00000587256 NUTM2FA1L443 756 aa21.34■■□□□ 1.01
ATG4D-207ENST00000587256 ORAI2Q96SN7 254 aa21.34■■□□□ 1.01
ATG4D-207ENST00000587256 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
ATG4D-207ENST00000587256 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1.01
ATG4D-207ENST00000587256 DDX17Q92841 729 aaKnown RBP21.32■■□□□ 1
ATG4D-207ENST00000587256 SHPRHQ149N8 1683 aa21.31■■□□□ 1
ATG4D-207ENST00000587256 ESCO1Q5FWF5 840 aa21.31■■□□□ 1
ATG4D-207ENST00000587256 PCGF6Q9BYE7 350 aa21.31■■□□□ 1
ATG4D-207ENST00000587256 TONSLQ96HA7 1378 aa21.31■■□□□ 1
ATG4D-207ENST00000587256 MINK1Q8N4C8 1332 aaPredicted RBP21.29■■□□□ 1
ATG4D-207ENST00000587256 KIF1AQ12756 1690 aa21.28■■□□□ 1
ATG4D-207ENST00000587256 NBPF1Q3BBV0 1214 aa21.28■■□□□ 1
ATG4D-207ENST00000587256 HIRIP3Q9BW71 556 aaPredicted RBP21.28■■□□□ 1
ATG4D-207ENST00000587256 TRPM1Q7Z4N2 1603 aa21.28■■□□□ 1
ATG4D-207ENST00000587256 SPATA31A6Q5VVP1 1343 aa21.27■□□□□ 0.99
ATG4D-207ENST00000587256 EIF3AQ14152 1382 aaKnown RBP21.26■□□□□ 0.99
ATG4D-207ENST00000587256 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
ATG4D-207ENST00000587256 NPHP3Q7Z494 1330 aa21.26■□□□□ 0.99
ATG4D-207ENST00000587256 ANKARQ7Z5J8 1434 aa21.25■□□□□ 0.99
ATG4D-207ENST00000587256 SOS2Q07890 1332 aaPredicted RBP21.24■□□□□ 0.99
ATG4D-207ENST00000587256 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
ATG4D-207ENST00000587256 LRP6O75581 1613 aa21.23■□□□□ 0.99
ATG4D-207ENST00000587256 TULP4Q9NRJ4 1543 aa21.23■□□□□ 0.99
ATG4D-207ENST00000587256 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
ATG4D-207ENST00000587256 USP32Q8NFA0 1604 aa21.22■□□□□ 0.99
ATG4D-207ENST00000587256 PXDNQ92626 1479 aa21.22■□□□□ 0.99
ATG4D-207ENST00000587256 FOXO3O43524 673 aa21.22■□□□□ 0.99
ATG4D-207ENST00000587256 RGPD8O14715 1765 aaPredicted RBP21.22■□□□□ 0.99
ATG4D-207ENST00000587256 MEX3CQ5U5Q3 659 aaKnown RBP21.21■□□□□ 0.99
ATG4D-207ENST00000587256 WASLO00401 505 aaPredicted RBP21.2■□□□□ 0.98
ATG4D-207ENST00000587256 XPCQ01831 940 aaPredicted RBP21.2■□□□□ 0.98
ATG4D-207ENST00000587256 PHF8Q9UPP1 1060 aa21.2■□□□□ 0.98
ATG4D-207ENST00000587256 NUTM2BA6NNL0 878 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-207ENST00000587256 NUTM2EB1AL46 878 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-207ENST00000587256 NUTM2AQ8IVF1 878 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-207ENST00000587256 CENPJQ9HC77 1338 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-207ENST00000587256 QRICH2Q9H0J4 1663 aa21.18■□□□□ 0.98
ATG4D-207ENST00000587256 ILDR2Q71H61 639 aa21.18■□□□□ 0.98
ATG4D-207ENST00000587256 NBPF8Q3BBV2 869 aa21.17■□□□□ 0.98
ATG4D-207ENST00000587256 ATP7BP35670 1465 aa21.16■□□□□ 0.98
ATG4D-207ENST00000587256 PRR36Q9H6K5 1346 aa21.16■□□□□ 0.98
ATG4D-207ENST00000587256 ITSN1Q15811 1721 aa21.15■□□□□ 0.98
ATG4D-207ENST00000587256 RALGAPBQ86X10 1494 aa21.15■□□□□ 0.98
ATG4D-207ENST00000587256 PMFBP1Q8TBY8 1022 aa21.14■□□□□ 0.97
ATG4D-207ENST00000587256 COL22A1Q8NFW1 1626 aaPredicted RBP21.14■□□□□ 0.97
ATG4D-207ENST00000587256 GPRASP1Q5JY77 1395 aa21.13■□□□□ 0.97
ATG4D-207ENST00000587256 KRT28Q7Z3Y7 464 aa21.12■□□□□ 0.97
ATG4D-207ENST00000587256 CDK19Q9BWU1 502 aa21.12■□□□□ 0.97
ATG4D-207ENST00000587256 CLSPNQ9HAW4 1339 aa21.11■□□□□ 0.97
ATG4D-207ENST00000587256 PSME1Q06323 249 aa21.11■□□□□ 0.97
ATG4D-207ENST00000587256 RGS17Q9UGC6 210 aaPredicted RBP21.11■□□□□ 0.97
ATG4D-207ENST00000587256 TNS3Q68CZ2 1445 aa21.11■□□□□ 0.97
ATG4D-207ENST00000587256 TOPAZ1Q8N9V7 1692 aa21.1■□□□□ 0.97
ATG4D-207ENST00000587256 NUDT16Q96DE0 195 aaKnown RBP21.1■□□□□ 0.97
ATG4D-207ENST00000587256 CARD11Q9BXL7 1154 aa21.1■□□□□ 0.97
ATG4D-207ENST00000587256 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
ATG4D-207ENST00000587256 SRPK2P78362 688 aaKnown RBP21.09■□□□□ 0.97
ATG4D-207ENST00000587256 NGDNQ8NEJ9 315 aaKnown RBP21.08■□□□□ 0.97
ATG4D-207ENST00000587256 ADAMTS2O95450 1211 aa21.07■□□□□ 0.96
ATG4D-207ENST00000587256 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
ATG4D-207ENST00000587256 CCER1Q8TC90 406 aaPredicted RBP21.06■□□□□ 0.96
ATG4D-207ENST00000587256 C8orf37Q96NL8 207 aa21.06■□□□□ 0.96
ATG4D-207ENST00000587256 TRPM3Q9HCF6 1732 aaPredicted RBP21.05■□□□□ 0.96
ATG4D-207ENST00000587256 LMOD2Q6P5Q4 547 aa21.05■□□□□ 0.96
ATG4D-207ENST00000587256 ARHGEF10O15013 1369 aa21.05■□□□□ 0.96
ATG4D-207ENST00000587256 ZNF772Q68DY9 489 aaPredicted RBP21.04■□□□□ 0.96
ATG4D-207ENST00000587256 CABP2Q9NPB3 220 aa21.04■□□□□ 0.96
ATG4D-207ENST00000587256 AFF2P51816 1311 aa21.04■□□□□ 0.96
ATG4D-207ENST00000587256 EVC2Q86UK5 1308 aa21.04■□□□□ 0.96
ATG4D-207ENST00000587256 POTEAQ6S8J7 498 aa21.03■□□□□ 0.96
ATG4D-207ENST00000587256 CCDC61Q9Y6R9 512 aa21.03■□□□□ 0.96
ATG4D-207ENST00000587256 PPIP5K1Q6PFW1 1433 aa21.03■□□□□ 0.96
ATG4D-207ENST00000587256 PLEKHG5O94827 1062 aa21.01■□□□□ 0.95
ATG4D-207ENST00000587256 HAP1P54257 671 aaPredicted RBP21.01■□□□□ 0.95
ATG4D-207ENST00000587256 SBNO2Q9Y2G9 1366 aa21■□□□□ 0.95
ATG4D-207ENST00000587256 NGLY1Q96IV0 654 aa21■□□□□ 0.95
ATG4D-207ENST00000587256 TIMELESSQ9UNS1 1208 aa21■□□□□ 0.95
ATG4D-207ENST00000587256 ALS2Q96Q42 1657 aa20.99■□□□□ 0.95
ATG4D-207ENST00000587256 POLR3AO14802 1390 aaPredicted RBP20.99■□□□□ 0.95
ATG4D-207ENST00000587256 ABCA3Q99758 1704 aa20.99■□□□□ 0.95
ATG4D-207ENST00000587256 PAK3O75914 559 aaPredicted RBP20.99■□□□□ 0.95
ATG4D-207ENST00000587256 ACEP12821 1306 aa20.99■□□□□ 0.95
ATG4D-207ENST00000587256 MARF1Q9Y4F3 1742 aaKnown RBP20.98■□□□□ 0.95
ATG4D-207ENST00000587256 PLEKHG3A1L390 1219 aa20.97■□□□□ 0.95
ATG4D-207ENST00000587256 SOCS7O14512 581 aa20.97■□□□□ 0.95
ATG4D-207ENST00000587256 CABLES1Q8TDN4 633 aa20.96■□□□□ 0.95
ATG4D-207ENST00000587256 ATAD2Q6PL18 1390 aa20.95■□□□□ 0.94
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