RNA–Protein interactions for RNA: ENST00000587165.1

LINC01140-208, Transcript of long intergenic non-protein coding RNA 1140, human

TSL 3

Gene LINC01140, Length 426 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01140-208	ENST00000587165	PHLPP1	O60346	1717 aa		7.36	□□□□□ -1.23
LINC01140-208	ENST00000587165	IFT172	Q9UG01	1749 aa		7.36	□□□□□ -1.23
LINC01140-208	ENST00000587165	NPHP3	Q7Z494	1330 aa		7.36	□□□□□ -1.23
LINC01140-208	ENST00000587165	PRAM1	Q96QH2	718 aa		7.36	□□□□□ -1.23
LINC01140-208	ENST00000587165	SETD1A	O15047	1707 aa	Known RBP	7.35	□□□□□ -1.23
LINC01140-208	ENST00000587165	SAFB2	Q14151	953 aa	Known RBP eCLIP	7.35	□□□□□ -1.23
LINC01140-208	ENST00000587165	TRAK1	Q9UPV9	953 aa		7.35	□□□□□ -1.23
LINC01140-208	ENST00000587165	DLC1	Q96QB1	1528 aa		7.35	□□□□□ -1.23
LINC01140-208	ENST00000587165	NALCN	Q8IZF0	1738 aa		7.35	□□□□□ -1.23
LINC01140-208	ENST00000587165	NUTM2B	A6NNL0	878 aa	Predicted RBP	7.34	□□□□□ -1.23
LINC01140-208	ENST00000587165	NUTM2E	B1AL46	878 aa	Predicted RBP	7.34	□□□□□ -1.23
LINC01140-208	ENST00000587165	NUTM2A	Q8IVF1	878 aa	Predicted RBP	7.34	□□□□□ -1.23
LINC01140-208	ENST00000587165	ORAI2	Q96SN7	254 aa		7.34	□□□□□ -1.23
LINC01140-208	ENST00000587165	KNDC1	Q76NI1	1749 aa		7.34	□□□□□ -1.23
LINC01140-208	ENST00000587165	COL16A1	Q07092	1604 aa	Predicted RBP	7.34	□□□□□ -1.24
LINC01140-208	ENST00000587165	PLEKHH1	Q9ULM0	1364 aa		7.33	□□□□□ -1.24
LINC01140-208	ENST00000587165	NUTM2F	A1L443	756 aa		7.33	□□□□□ -1.24
LINC01140-208	ENST00000587165	SOCS7	O14512	581 aa		7.33	□□□□□ -1.24
LINC01140-208	ENST00000587165	NEUROD1	Q13562	356 aa		7.33	□□□□□ -1.24
LINC01140-208	ENST00000587165	ZNF772	Q68DY9	489 aa	Predicted RBP	7.33	□□□□□ -1.24
LINC01140-208	ENST00000587165	ILDR2	Q71H61	639 aa		7.33	□□□□□ -1.24
LINC01140-208	ENST00000587165	SOS2	Q07890	1332 aa	Predicted RBP	7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	FOXO3	O43524	673 aa		7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	PSME1	Q06323	249 aa		7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	ANKAR	Q7Z5J8	1434 aa		7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	ADGRB1	O14514	1584 aa		7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	PNPLA6	Q8IY17	1366 aa		7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	TONSL	Q96HA7	1378 aa		7.32	□□□□□ -1.24
LINC01140-208	ENST00000587165	HAP1	P54257	671 aa	Predicted RBP	7.31	□□□□□ -1.24
LINC01140-208	ENST00000587165	DDX17	Q92841	729 aa	Known RBP	7.31	□□□□□ -1.24
LINC01140-208	ENST00000587165	L3MBTL2	Q969R5	705 aa		7.31	□□□□□ -1.24
LINC01140-208	ENST00000587165	HIRIP3	Q9BW71	556 aa	Predicted RBP	7.31	□□□□□ -1.24
LINC01140-208	ENST00000587165	PHF8	Q9UPP1	1060 aa		7.31	□□□□□ -1.24
LINC01140-208	ENST00000587165	GPRASP1	Q5JY77	1395 aa		7.31	□□□□□ -1.24
LINC01140-208	ENST00000587165	NHSL1	Q5SYE7	1610 aa		7.3	□□□□□ -1.24
LINC01140-208	ENST00000587165	WASL	O00401	505 aa	Predicted RBP	7.3	□□□□□ -1.24
LINC01140-208	ENST00000587165	XPC	Q01831	940 aa	Predicted RBP	7.3	□□□□□ -1.24
LINC01140-208	ENST00000587165	SHPRH	Q149N8	1683 aa		7.3	□□□□□ -1.24
LINC01140-208	ENST00000587165	ROCK2	O75116	1388 aa	Known RBP	7.3	□□□□□ -1.24
LINC01140-208	ENST00000587165	CENPJ	Q9HC77	1338 aa	Predicted RBP	7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	KIF1A	Q12756	1690 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	LMOD2	Q6P5Q4	547 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	KRT28	Q7Z3Y7	464 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	NGDN	Q8NEJ9	315 aa	Known RBP	7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	NGLY1	Q96IV0	654 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	C8orf37	Q96NL8	207 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	SIN3A	Q96ST3	1273 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	ARHGEF10	O15013	1369 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	ADGRB2	O60241	1585 aa		7.29	□□□□□ -1.24
LINC01140-208	ENST00000587165	LRP6	O75581	1613 aa		7.28	□□□□□ -1.24
LINC01140-208	ENST00000587165	FMN2	Q9NZ56	1722 aa		7.28	□□□□□ -1.24
LINC01140-208	ENST00000587165	ADAMTS2	O95450	1211 aa		7.28	□□□□□ -1.24
LINC01140-208	ENST00000587165	SRPK2	P78362	688 aa	Known RBP	7.28	□□□□□ -1.24
LINC01140-208	ENST00000587165	AFF2	P51816	1311 aa		7.27	□□□□□ -1.24
LINC01140-208	ENST00000587165	TNS3	Q68CZ2	1445 aa		7.27	□□□□□ -1.24
LINC01140-208	ENST00000587165	TULP4	Q9NRJ4	1543 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	KIAA1210	Q9ULL0	1709 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	RXRB	P28702	533 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	NBPF1	Q3BBV0	1214 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	PMFBP1	Q8TBY8	1022 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	RGS17	Q9UGC6	210 aa	Predicted RBP	7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	SBNO1	A3KN83	1393 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	PXDN	Q92626	1479 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	SPATA31A3	Q5VYP0	1347 aa		7.27	□□□□□ -1.25
LINC01140-208	ENST00000587165	PAK3	O75914	559 aa	Predicted RBP	7.26	□□□□□ -1.25
LINC01140-208	ENST00000587165	POTEA	Q6S8J7	498 aa		7.26	□□□□□ -1.25
LINC01140-208	ENST00000587165	NUDT16	Q96DE0	195 aa	Known RBP	7.26	□□□□□ -1.25
LINC01140-208	ENST00000587165	CDK19	Q9BWU1	502 aa		7.26	□□□□□ -1.25
LINC01140-208	ENST00000587165	CARD11	Q9BXL7	1154 aa		7.26	□□□□□ -1.25
LINC01140-208	ENST00000587165	CCDC61	Q9Y6R9	512 aa		7.26	□□□□□ -1.25
LINC01140-208	ENST00000587165	EVC2	Q86UK5	1308 aa		7.26	□□□□□ -1.25
LINC01140-208	ENST00000587165	RBM6	P78332	1123 aa	Known RBP	7.25	□□□□□ -1.25
LINC01140-208	ENST00000587165	USP21	Q9UK80	565 aa		7.25	□□□□□ -1.25
LINC01140-208	ENST00000587165	TRPC5	Q9UL62	973 aa	Predicted RBP	7.25	□□□□□ -1.25
LINC01140-208	ENST00000587165	PRR36	Q9H6K5	1346 aa		7.25	□□□□□ -1.25
LINC01140-208	ENST00000587165	CLSPN	Q9HAW4	1339 aa		7.25	□□□□□ -1.25
LINC01140-208	ENST00000587165	SLC24A1	O60721	1099 aa		7.24	□□□□□ -1.25
LINC01140-208	ENST00000587165	PLEKHG5	O94827	1062 aa		7.24	□□□□□ -1.25
LINC01140-208	ENST00000587165	PCGF6	Q9BYE7	350 aa		7.24	□□□□□ -1.25
LINC01140-208	ENST00000587165	QTRT2	Q9H974	415 aa	Known RBP	7.24	□□□□□ -1.25
LINC01140-208	ENST00000587165	ARHGEF28	Q8N1W1	1705 aa	Known RBP	7.24	□□□□□ -1.25
LINC01140-208	ENST00000587165	ATP7B	P35670	1465 aa		7.24	□□□□□ -1.25
LINC01140-208	ENST00000587165	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.23	□□□□□ -1.25
LINC01140-208	ENST00000587165	COL22A1	Q8NFW1	1626 aa	Predicted RBP	7.23	□□□□□ -1.25
LINC01140-208	ENST00000587165	BRD4	O60885	1362 aa	Predicted RBP	7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	ATAD2	Q6PL18	1390 aa		7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	PLEKHG3	A1L390	1219 aa		7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	FNBP4	Q8N3X1	1017 aa	Predicted RBP	7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	CABP2	Q9NPB3	220 aa		7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	TIMELESS	Q9UNS1	1208 aa		7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	RALGAPB	Q86X10	1494 aa		7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	ACE	P12821	1306 aa		7.22	□□□□□ -1.25
LINC01140-208	ENST00000587165	POLR3A	O14802	1390 aa	Predicted RBP	7.21	□□□□□ -1.25
LINC01140-208	ENST00000587165	PPIP5K1	Q6PFW1	1433 aa		7.21	□□□□□ -1.25
LINC01140-208	ENST00000587165	NBPF8	Q3BBV2	869 aa		7.21	□□□□□ -1.26
LINC01140-208	ENST00000587165	UNC5CL	Q8IV45	518 aa		7.21	□□□□□ -1.26
LINC01140-208	ENST00000587165	CCER1	Q8TC90	406 aa	Predicted RBP	7.21	□□□□□ -1.26
LINC01140-208	ENST00000587165	CABLES1	Q8TDN4	633 aa		7.21	□□□□□ -1.26
LINC01140-208	ENST00000587165	PRDM11	Q9NQV5	511 aa		7.21	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms