RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 STRCP1A6NGW2 1772 aa16.46■□□□□ 0.23
DNMT1-211ENST00000586988 CDCA8Q53HL2 280 aa16.46■□□□□ 0.23
DNMT1-211ENST00000586988 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
DNMT1-211ENST00000586988 WAPLQ7Z5K2 1190 aa16.45■□□□□ 0.22
DNMT1-211ENST00000586988 NALCNQ8IZF0 1738 aa16.45■□□□□ 0.22
DNMT1-211ENST00000586988 NCOA3Q9Y6Q9 1424 aa16.45■□□□□ 0.22
DNMT1-211ENST00000586988 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
DNMT1-211ENST00000586988 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
DNMT1-211ENST00000586988 DISP3Q9P2K9 1392 aa16.44■□□□□ 0.22
DNMT1-211ENST00000586988 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
DNMT1-211ENST00000586988 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.44■□□□□ 0.22
DNMT1-211ENST00000586988 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
DNMT1-211ENST00000586988 MINK1Q8N4C8 1332 aaPredicted RBP16.43■□□□□ 0.22
DNMT1-211ENST00000586988 CCDC7Q96M83 1385 aa16.42■□□□□ 0.22
DNMT1-211ENST00000586988 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
DNMT1-211ENST00000586988 KIF7Q2M1P5 1343 aa16.41■□□□□ 0.22
DNMT1-211ENST00000586988 PROSER2Q86WR7 435 aaPredicted RBP16.4■□□□□ 0.22
DNMT1-211ENST00000586988 PUS7Q96PZ0 661 aaKnown RBP16.4■□□□□ 0.22
DNMT1-211ENST00000586988 WASHC2AQ641Q2 1341 aa16.4■□□□□ 0.22
DNMT1-211ENST00000586988 ATAD2Q6PL18 1390 aa16.39■□□□□ 0.21
DNMT1-211ENST00000586988 DCCP43146 1447 aa16.39■□□□□ 0.21
DNMT1-211ENST00000586988 LRRC7Q96NW7 1537 aa16.39■□□□□ 0.21
DNMT1-211ENST00000586988 TMEM94Q12767 1356 aa16.38■□□□□ 0.21
DNMT1-211ENST00000586988 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
DNMT1-211ENST00000586988 NINLQ9Y2I6 1382 aa16.38■□□□□ 0.21
DNMT1-211ENST00000586988 MYOM1P52179 1685 aa16.37■□□□□ 0.21
DNMT1-211ENST00000586988 WASLO00401 505 aaPredicted RBP16.37■□□□□ 0.21
DNMT1-211ENST00000586988 SRPK2P78362 688 aaKnown RBP16.37■□□□□ 0.21
DNMT1-211ENST00000586988 C14orf37Q86TY3 774 aa16.37■□□□□ 0.21
DNMT1-211ENST00000586988 ITSN1Q15811 1721 aa16.36■□□□□ 0.21
DNMT1-211ENST00000586988 C11orf95C9JLR9 678 aaPredicted RBP16.36■□□□□ 0.21
DNMT1-211ENST00000586988 MSH6P52701 1360 aa16.36■□□□□ 0.21
DNMT1-211ENST00000586988 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
DNMT1-211ENST00000586988 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
DNMT1-211ENST00000586988 LTBP4Q8N2S1 1624 aa16.35■□□□□ 0.21
DNMT1-211ENST00000586988 TOPAZ1Q8N9V7 1692 aa16.35■□□□□ 0.21
DNMT1-211ENST00000586988 POLR3GLQ9BT43 218 aa16.35■□□□□ 0.21
DNMT1-211ENST00000586988 ATP7BP35670 1465 aa16.35■□□□□ 0.21
DNMT1-211ENST00000586988 CDK19Q9BWU1 502 aa16.34■□□□□ 0.21
DNMT1-211ENST00000586988 C19orf44Q9H6X5 657 aa16.32■□□□□ 0.2
DNMT1-211ENST00000586988 CABP2Q9NPB3 220 aa16.32■□□□□ 0.2
DNMT1-211ENST00000586988 USP32Q8NFA0 1604 aa16.31■□□□□ 0.2
DNMT1-211ENST00000586988 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
DNMT1-211ENST00000586988 CADPS2Q86UW7 1296 aa16.29■□□□□ 0.2
DNMT1-211ENST00000586988 PPIP5K1Q6PFW1 1433 aa16.28■□□□□ 0.2
DNMT1-211ENST00000586988 KIF1AQ12756 1690 aa16.28■□□□□ 0.2
DNMT1-211ENST00000586988 ATF3P18847 181 aa16.28■□□□□ 0.2
DNMT1-211ENST00000586988 NUDT16Q96DE0 195 aaKnown RBP16.28■□□□□ 0.2
DNMT1-211ENST00000586988 IQSEC2Q5JU85 1478 aa16.28■□□□□ 0.2
DNMT1-211ENST00000586988 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.2
DNMT1-211ENST00000586988 TMC1Q8TDI8 760 aa16.27■□□□□ 0.2
DNMT1-211ENST00000586988 CCDC61Q9Y6R9 512 aa16.27■□□□□ 0.2
DNMT1-211ENST00000586988 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
DNMT1-211ENST00000586988 DDX10Q13206 875 aaKnown RBP16.26■□□□□ 0.19
DNMT1-211ENST00000586988 MST1RQ04912 1400 aa16.26■□□□□ 0.19
DNMT1-211ENST00000586988 C1orf167Q5SNV9 1468 aa16.25■□□□□ 0.19
DNMT1-211ENST00000586988 RGPD8O14715 1765 aaPredicted RBP16.25■□□□□ 0.19
DNMT1-211ENST00000586988 AKAP12Q02952 1782 aa16.24■□□□□ 0.19
DNMT1-211ENST00000586988 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
DNMT1-211ENST00000586988 MON2Q7Z3U7 1717 aa16.23■□□□□ 0.19
DNMT1-211ENST00000586988 NUTM2FA1L443 756 aa16.23■□□□□ 0.19
DNMT1-211ENST00000586988 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
DNMT1-211ENST00000586988 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
DNMT1-211ENST00000586988 CABP1Q9NZU7 370 aa16.22■□□□□ 0.19
DNMT1-211ENST00000586988 A0A1W2PP64 1363 aa16.22■□□□□ 0.19
DNMT1-211ENST00000586988 CD163L1Q9NR16 1453 aa16.22■□□□□ 0.19
DNMT1-211ENST00000586988 PLEKHG3A1L390 1219 aa16.21■□□□□ 0.19
DNMT1-211ENST00000586988 KCNA4P22459 653 aa16.21■□□□□ 0.19
DNMT1-211ENST00000586988 CPSF1Q10570 1443 aaKnown RBP16.2■□□□□ 0.18
DNMT1-211ENST00000586988 PANK3Q9H999 370 aa16.2■□□□□ 0.18
DNMT1-211ENST00000586988 POLR3AO14802 1390 aaPredicted RBP16.2■□□□□ 0.18
DNMT1-211ENST00000586988 NRKQ7Z2Y5 1582 aa16.2■□□□□ 0.18
DNMT1-211ENST00000586988 DIEXFQ68CQ4 756 aaKnown RBP16.19■□□□□ 0.18
DNMT1-211ENST00000586988 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
DNMT1-211ENST00000586988 EDC4Q6P2E9 1401 aaKnown RBP16.19■□□□□ 0.18
DNMT1-211ENST00000586988 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
DNMT1-211ENST00000586988 KTN1Q86UP2 1357 aaKnown RBP16.18■□□□□ 0.18
DNMT1-211ENST00000586988 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
DNMT1-211ENST00000586988 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
DNMT1-211ENST00000586988 BRD4O60885 1362 aaPredicted RBP16.17■□□□□ 0.18
DNMT1-211ENST00000586988 NGDNQ8NEJ9 315 aaKnown RBP16.17■□□□□ 0.18
DNMT1-211ENST00000586988 KNSTRNQ9Y448 316 aa16.17■□□□□ 0.18
DNMT1-211ENST00000586988 USP6P35125 1406 aa16.17■□□□□ 0.18
DNMT1-211ENST00000586988 ACEP12821 1306 aa16.17■□□□□ 0.18
DNMT1-211ENST00000586988 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
DNMT1-211ENST00000586988 NSD2O96028 1365 aa16.15■□□□□ 0.18
DNMT1-211ENST00000586988 NPC1L1Q9UHC9 1359 aa16.15■□□□□ 0.18
DNMT1-211ENST00000586988 PMFBP1Q8TBY8 1022 aa16.15■□□□□ 0.18
DNMT1-211ENST00000586988 SLAIN2Q9P270 581 aa16.15■□□□□ 0.18
DNMT1-211ENST00000586988 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
DNMT1-211ENST00000586988 PER1O15534 1290 aaPredicted RBP16.13■□□□□ 0.17
DNMT1-211ENST00000586988 ORAI2Q96SN7 254 aa16.13■□□□□ 0.17
DNMT1-211ENST00000586988 ANKRD26Q9UPS8 1709 aa16.13■□□□□ 0.17
DNMT1-211ENST00000586988 NPHP3Q7Z494 1330 aa16.13■□□□□ 0.17
DNMT1-211ENST00000586988 NHSL1Q5SYE7 1610 aa16.12■□□□□ 0.17
DNMT1-211ENST00000586988 ROBO1Q9Y6N7 1651 aa16.12■□□□□ 0.17
DNMT1-211ENST00000586988 TOM1O60784 492 aa16.12■□□□□ 0.17
DNMT1-211ENST00000586988 CERKQ8TCT0 537 aa16.12■□□□□ 0.17
DNMT1-211ENST00000586988 FBXO41Q8TF61 875 aa16.12■□□□□ 0.17
DNMT1-211ENST00000586988 CARD14Q9BXL6 1004 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms