RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 NPHP3Q7Z494 1330 aa12□□□□□ -0.49
CAPNS1-203ENST00000586963 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
CAPNS1-203ENST00000586963 CCDC144AA2RUR9 1427 aa12□□□□□ -0.49
CAPNS1-203ENST00000586963 ESCO1Q5FWF5 840 aa11.99□□□□□ -0.49
CAPNS1-203ENST00000586963 ACIN1Q9UKV3 1341 aaKnown RBP11.99□□□□□ -0.49
CAPNS1-203ENST00000586963 SPATA31E1Q6ZUB1 1445 aa11.99□□□□□ -0.49
CAPNS1-203ENST00000586963 PPLO60437 1756 aa11.98□□□□□ -0.49
CAPNS1-203ENST00000586963 RGS12O14924 1447 aa11.98□□□□□ -0.49
CAPNS1-203ENST00000586963 TECPR2O15040 1411 aa11.98□□□□□ -0.49
CAPNS1-203ENST00000586963 LRPPRCP42704 1394 aaKnown RBP11.98□□□□□ -0.49
CAPNS1-203ENST00000586963 ABCC11Q96J66 1382 aa11.98□□□□□ -0.49
CAPNS1-203ENST00000586963 USP21Q9UK80 565 aa11.98□□□□□ -0.49
CAPNS1-203ENST00000586963 TRPC5Q9UL62 973 aaPredicted RBP11.98□□□□□ -0.49
CAPNS1-203ENST00000586963 WAPLQ7Z5K2 1190 aa11.97□□□□□ -0.49
CAPNS1-203ENST00000586963 SIRT1Q96EB6 747 aa11.97□□□□□ -0.49
CAPNS1-203ENST00000586963 STK26Q9P289 416 aa11.97□□□□□ -0.49
CAPNS1-203ENST00000586963 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.49
CAPNS1-203ENST00000586963 FOXO3O43524 673 aa11.96□□□□□ -0.49
CAPNS1-203ENST00000586963 TMEM132EQ6IEE7 984 aa11.95□□□□□ -0.5
CAPNS1-203ENST00000586963 MYOM2P54296 1465 aa11.95□□□□□ -0.5
CAPNS1-203ENST00000586963 PXDNQ92626 1479 aa11.94□□□□□ -0.5
CAPNS1-203ENST00000586963 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
CAPNS1-203ENST00000586963 ATRNO75882 1429 aa11.94□□□□□ -0.5
CAPNS1-203ENST00000586963 COL22A1Q8NFW1 1626 aaPredicted RBP11.93□□□□□ -0.5
CAPNS1-203ENST00000586963 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
CAPNS1-203ENST00000586963 YTHDC2Q9H6S0 1430 aaKnown RBP11.93□□□□□ -0.5
CAPNS1-203ENST00000586963 ATAD2Q6PL18 1390 aa11.92□□□□□ -0.5
CAPNS1-203ENST00000586963 PLEKHH1Q9ULM0 1364 aa11.92□□□□□ -0.5
CAPNS1-203ENST00000586963 NUTM2FA1L443 756 aa11.92□□□□□ -0.5
CAPNS1-203ENST00000586963 XPCQ01831 940 aaPredicted RBP11.92□□□□□ -0.5
CAPNS1-203ENST00000586963 SRCAPQ6ZRS2 3230 aa11.92□□□□□ -0.5
CAPNS1-203ENST00000586963 SPATA31A3Q5VYP0 1347 aa11.91□□□□□ -0.5
CAPNS1-203ENST00000586963 BCL9LQ86UU0 1499 aa11.91□□□□□ -0.5
CAPNS1-203ENST00000586963 KRT28Q7Z3Y7 464 aa11.9□□□□□ -0.5
CAPNS1-203ENST00000586963 GJD4Q96KN9 370 aaPredicted RBP11.9□□□□□ -0.5
CAPNS1-203ENST00000586963 DHX57Q6P158 1386 aaKnown RBP11.9□□□□□ -0.5
CAPNS1-203ENST00000586963 CFAP70Q5T0N1 1121 aa11.89□□□□□ -0.51
CAPNS1-203ENST00000586963 CCDC125Q86Z20 511 aa11.89□□□□□ -0.51
CAPNS1-203ENST00000586963 NRXN1Q9ULB1 1477 aa11.89□□□□□ -0.51
CAPNS1-203ENST00000586963 KNDC1Q76NI1 1749 aa11.89□□□□□ -0.51
CAPNS1-203ENST00000586963 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
CAPNS1-203ENST00000586963 EP400Q96L91 3159 aa11.88□□□□□ -0.51
CAPNS1-203ENST00000586963 PSME1Q06323 249 aa11.88□□□□□ -0.51
CAPNS1-203ENST00000586963 UNC5CLQ8IV45 518 aa11.88□□□□□ -0.51
CAPNS1-203ENST00000586963 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
CAPNS1-203ENST00000586963 PRAM1Q96QH2 718 aa11.86□□□□□ -0.51
CAPNS1-203ENST00000586963 FMN2Q9NZ56 1722 aa11.86□□□□□ -0.51
CAPNS1-203ENST00000586963 SLIT2O94813 1529 aa11.86□□□□□ -0.51
CAPNS1-203ENST00000586963 SBNO1A3KN83 1393 aa11.85□□□□□ -0.51
CAPNS1-203ENST00000586963 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
CAPNS1-203ENST00000586963 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
CAPNS1-203ENST00000586963 POGKQ9P215 609 aa11.84□□□□□ -0.51
CAPNS1-203ENST00000586963 TNS3Q68CZ2 1445 aa11.84□□□□□ -0.51
CAPNS1-203ENST00000586963 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
CAPNS1-203ENST00000586963 HAP1P54257 671 aaPredicted RBP11.83□□□□□ -0.52
CAPNS1-203ENST00000586963 SAFB2Q14151 953 aaKnown RBP eCLIP11.83□□□□□ -0.52
CAPNS1-203ENST00000586963 ZRANB1Q9UGI0 708 aa11.83□□□□□ -0.52
CAPNS1-203ENST00000586963 ANKARQ7Z5J8 1434 aa11.83□□□□□ -0.52
CAPNS1-203ENST00000586963 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
CAPNS1-203ENST00000586963 ARHGEF10O15013 1369 aa11.82□□□□□ -0.52
CAPNS1-203ENST00000586963 DLC1Q96QB1 1528 aa11.82□□□□□ -0.52
CAPNS1-203ENST00000586963 ONECUT3O60422 494 aaPredicted RBP11.82□□□□□ -0.52
CAPNS1-203ENST00000586963 VPS72Q15906 364 aa11.82□□□□□ -0.52
CAPNS1-203ENST00000586963 CABLES1Q8TDN4 633 aa11.82□□□□□ -0.52
CAPNS1-203ENST00000586963 MARF1Q9Y4F3 1742 aaKnown RBP11.82□□□□□ -0.52
CAPNS1-203ENST00000586963 HRCP23327 699 aa11.81□□□□□ -0.52
CAPNS1-203ENST00000586963 LMOD2Q6P5Q4 547 aa11.81□□□□□ -0.52
CAPNS1-203ENST00000586963 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
CAPNS1-203ENST00000586963 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.8□□□□□ -0.52
CAPNS1-203ENST00000586963 USP32Q8NFA0 1604 aa11.8□□□□□ -0.52
CAPNS1-203ENST00000586963 TRAK1Q9UPV9 953 aa11.8□□□□□ -0.52
CAPNS1-203ENST00000586963 EIF3AQ14152 1382 aaKnown RBP11.79□□□□□ -0.52
CAPNS1-203ENST00000586963 ADGRB1O14514 1584 aa11.79□□□□□ -0.52
CAPNS1-203ENST00000586963 GLI3P10071 1580 aa11.79□□□□□ -0.52
CAPNS1-203ENST00000586963 FAM83GA6ND36 823 aa11.79□□□□□ -0.52
CAPNS1-203ENST00000586963 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
CAPNS1-203ENST00000586963 DCAF11Q8TEB1 546 aa11.79□□□□□ -0.52
CAPNS1-203ENST00000586963 BLMP54132 1417 aaPredicted RBP11.78□□□□□ -0.52
CAPNS1-203ENST00000586963 WASLO00401 505 aaPredicted RBP11.78□□□□□ -0.52
CAPNS1-203ENST00000586963 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
CAPNS1-203ENST00000586963 KDM2AQ9Y2K7 1162 aa11.78□□□□□ -0.52
CAPNS1-203ENST00000586963 GPRASP1Q5JY77 1395 aa11.78□□□□□ -0.52
CAPNS1-203ENST00000586963 ADGRB2O60241 1585 aa11.77□□□□□ -0.53
CAPNS1-203ENST00000586963 CCDC9Q9Y3X0 531 aaKnown RBP11.77□□□□□ -0.53
CAPNS1-203ENST00000586963 MINK1Q8N4C8 1332 aaPredicted RBP11.77□□□□□ -0.53
CAPNS1-203ENST00000586963 PRR36Q9H6K5 1346 aa11.77□□□□□ -0.53
CAPNS1-203ENST00000586963 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
CAPNS1-203ENST00000586963 KRT27Q7Z3Y8 459 aa11.76□□□□□ -0.53
CAPNS1-203ENST00000586963 RGPD8O14715 1765 aaPredicted RBP11.76□□□□□ -0.53
CAPNS1-203ENST00000586963 SF3B2Q13435 895 aaKnown RBP11.75□□□□□ -0.53
CAPNS1-203ENST00000586963 NGDNQ8NEJ9 315 aaKnown RBP11.75□□□□□ -0.53
CAPNS1-203ENST00000586963 NWD2Q9ULI1 1742 aa11.74□□□□□ -0.53
CAPNS1-203ENST00000586963 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
CAPNS1-203ENST00000586963 TULP4Q9NRJ4 1543 aa11.74□□□□□ -0.53
CAPNS1-203ENST00000586963 DEFB132Q7Z7B7 95 aa11.73□□□□□ -0.53
CAPNS1-203ENST00000586963 PAK3O75914 559 aaPredicted RBP11.72□□□□□ -0.53
CAPNS1-203ENST00000586963 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
CAPNS1-203ENST00000586963 NUDT16Q96DE0 195 aaKnown RBP11.72□□□□□ -0.53
CAPNS1-203ENST00000586963 TRPM3Q9HCF6 1732 aaPredicted RBP11.72□□□□□ -0.53
CAPNS1-203ENST00000586963 SPATA31A5Q5VU36 1347 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms