RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 AHDC1Q5TGY3 1603 aaPredicted RBP19.2■□□□□ 0.66
SMARCA4-210ENST00000586892 C1orf167Q5SNV9 1468 aa19.19■□□□□ 0.66
SMARCA4-210ENST00000586892 PRAM1Q96QH2 718 aa19.17■□□□□ 0.66
SMARCA4-210ENST00000586892 COL16A1Q07092 1604 aaPredicted RBP19.17■□□□□ 0.66
SMARCA4-210ENST00000586892 NHSL1Q5SYE7 1610 aa19.16■□□□□ 0.66
SMARCA4-210ENST00000586892 TRAK1Q9UPV9 953 aa19.16■□□□□ 0.66
SMARCA4-210ENST00000586892 PCGF6Q9BYE7 350 aa19.15■□□□□ 0.66
SMARCA4-210ENST00000586892 POGKQ9P215 609 aa19.15■□□□□ 0.66
SMARCA4-210ENST00000586892 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.66
SMARCA4-210ENST00000586892 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.66
SMARCA4-210ENST00000586892 MED1Q15648 1581 aaPredicted RBP19.14■□□□□ 0.65
SMARCA4-210ENST00000586892 ADGRB2O60241 1585 aa19.12■□□□□ 0.65
SMARCA4-210ENST00000586892 DISP3Q9P2K9 1392 aa19.12■□□□□ 0.65
SMARCA4-210ENST00000586892 SAFB2Q14151 953 aaKnown RBP eCLIP19.12■□□□□ 0.65
SMARCA4-210ENST00000586892 JCADQ9P266 1359 aa19.11■□□□□ 0.65
SMARCA4-210ENST00000586892 TRPM1Q7Z4N2 1603 aa19.11■□□□□ 0.65
SMARCA4-210ENST00000586892 TONSLQ96HA7 1378 aa19.1■□□□□ 0.65
SMARCA4-210ENST00000586892 NBPF1Q3BBV0 1214 aa19.1■□□□□ 0.65
SMARCA4-210ENST00000586892 ORAI2Q96SN7 254 aa19.1■□□□□ 0.65
SMARCA4-210ENST00000586892 SHPRHQ149N8 1683 aa19.08■□□□□ 0.65
SMARCA4-210ENST00000586892 ESCO1Q5FWF5 840 aa19.08■□□□□ 0.64
SMARCA4-210ENST00000586892 KIF1AQ12756 1690 aa19.06■□□□□ 0.64
SMARCA4-210ENST00000586892 NUTM2FA1L443 756 aa19.06■□□□□ 0.64
SMARCA4-210ENST00000586892 MINK1Q8N4C8 1332 aaPredicted RBP19.05■□□□□ 0.64
SMARCA4-210ENST00000586892 DDX17Q92841 729 aaKnown RBP19.05■□□□□ 0.64
SMARCA4-210ENST00000586892 LRRC59Q96AG4 307 aaKnown RBP19.05■□□□□ 0.64
SMARCA4-210ENST00000586892 RGPD8O14715 1765 aaPredicted RBP19.05■□□□□ 0.64
SMARCA4-210ENST00000586892 ANKARQ7Z5J8 1434 aa19.05■□□□□ 0.64
SMARCA4-210ENST00000586892 EIF3AQ14152 1382 aaKnown RBP19.05■□□□□ 0.64
SMARCA4-210ENST00000586892 NPHP3Q7Z494 1330 aa19.04■□□□□ 0.64
SMARCA4-210ENST00000586892 CLSPNQ9HAW4 1339 aa19.04■□□□□ 0.64
SMARCA4-210ENST00000586892 HIRIP3Q9BW71 556 aaPredicted RBP19.04■□□□□ 0.64
SMARCA4-210ENST00000586892 ROCK2O75116 1388 aaKnown RBP19.04■□□□□ 0.64
SMARCA4-210ENST00000586892 SOS2Q07890 1332 aaPredicted RBP19.03■□□□□ 0.64
SMARCA4-210ENST00000586892 SPATA31A6Q5VVP1 1343 aa19.03■□□□□ 0.64
SMARCA4-210ENST00000586892 TULP4Q9NRJ4 1543 aa19.02■□□□□ 0.64
SMARCA4-210ENST00000586892 WASLO00401 505 aaPredicted RBP19.02■□□□□ 0.64
SMARCA4-210ENST00000586892 USP32Q8NFA0 1604 aa19.02■□□□□ 0.64
SMARCA4-210ENST00000586892 NBPF8Q3BBV2 869 aa19.01■□□□□ 0.63
SMARCA4-210ENST00000586892 FOXO3O43524 673 aa19■□□□□ 0.63
SMARCA4-210ENST00000586892 PHF23Q9BUL5 403 aaPredicted RBP19■□□□□ 0.63
SMARCA4-210ENST00000586892 GPRASP1Q5JY77 1395 aa19■□□□□ 0.63
SMARCA4-210ENST00000586892 PXDNQ92626 1479 aa19■□□□□ 0.63
SMARCA4-210ENST00000586892 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
SMARCA4-210ENST00000586892 QRICH2Q9H0J4 1663 aa18.99■□□□□ 0.63
SMARCA4-210ENST00000586892 RALGAPBQ86X10 1494 aa18.98■□□□□ 0.63
SMARCA4-210ENST00000586892 PNPLA6Q8IY17 1366 aa18.98■□□□□ 0.63
SMARCA4-210ENST00000586892 PHF8Q9UPP1 1060 aa18.98■□□□□ 0.63
SMARCA4-210ENST00000586892 ITSN1Q15811 1721 aa18.97■□□□□ 0.63
SMARCA4-210ENST00000586892 LRP6O75581 1613 aa18.96■□□□□ 0.63
SMARCA4-210ENST00000586892 ATP7BP35670 1465 aa18.95■□□□□ 0.62
SMARCA4-210ENST00000586892 PRR36Q9H6K5 1346 aa18.95■□□□□ 0.62
SMARCA4-210ENST00000586892 COL22A1Q8NFW1 1626 aaPredicted RBP18.94■□□□□ 0.62
SMARCA4-210ENST00000586892 CDK19Q9BWU1 502 aa18.94■□□□□ 0.62
SMARCA4-210ENST00000586892 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
SMARCA4-210ENST00000586892 XPCQ01831 940 aaPredicted RBP18.93■□□□□ 0.62
SMARCA4-210ENST00000586892 CARD11Q9BXL7 1154 aa18.93■□□□□ 0.62
SMARCA4-210ENST00000586892 PSME1Q06323 249 aa18.92■□□□□ 0.62
SMARCA4-210ENST00000586892 KRT28Q7Z3Y7 464 aa18.92■□□□□ 0.62
SMARCA4-210ENST00000586892 PMFBP1Q8TBY8 1022 aa18.92■□□□□ 0.62
SMARCA4-210ENST00000586892 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
SMARCA4-210ENST00000586892 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
SMARCA4-210ENST00000586892 NUTM2BA6NNL0 878 aaPredicted RBP18.91■□□□□ 0.62
SMARCA4-210ENST00000586892 NUTM2EB1AL46 878 aaPredicted RBP18.91■□□□□ 0.62
SMARCA4-210ENST00000586892 MEX3CQ5U5Q3 659 aaKnown RBP18.91■□□□□ 0.62
SMARCA4-210ENST00000586892 NUTM2AQ8IVF1 878 aaPredicted RBP18.91■□□□□ 0.62
SMARCA4-210ENST00000586892 CCER1Q8TC90 406 aaPredicted RBP18.91■□□□□ 0.62
SMARCA4-210ENST00000586892 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
SMARCA4-210ENST00000586892 CCDC61Q9Y6R9 512 aa18.89■□□□□ 0.61
SMARCA4-210ENST00000586892 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
SMARCA4-210ENST00000586892 TNS3Q68CZ2 1445 aa18.89■□□□□ 0.61
SMARCA4-210ENST00000586892 SRPK2P78362 688 aaKnown RBP18.88■□□□□ 0.61
SMARCA4-210ENST00000586892 ILDR2Q71H61 639 aa18.88■□□□□ 0.61
SMARCA4-210ENST00000586892 RGS17Q9UGC6 210 aaPredicted RBP18.88■□□□□ 0.61
SMARCA4-210ENST00000586892 EVC2Q86UK5 1308 aa18.87■□□□□ 0.61
SMARCA4-210ENST00000586892 NGDNQ8NEJ9 315 aaKnown RBP18.87■□□□□ 0.61
SMARCA4-210ENST00000586892 SBNO2Q9Y2G9 1366 aa18.87■□□□□ 0.61
SMARCA4-210ENST00000586892 TRPM3Q9HCF6 1732 aaPredicted RBP18.86■□□□□ 0.61
SMARCA4-210ENST00000586892 ARHGEF10O15013 1369 aa18.85■□□□□ 0.61
SMARCA4-210ENST00000586892 POLR3AO14802 1390 aaPredicted RBP18.84■□□□□ 0.61
SMARCA4-210ENST00000586892 PLEKHG3A1L390 1219 aa18.84■□□□□ 0.61
SMARCA4-210ENST00000586892 CABP2Q9NPB3 220 aa18.84■□□□□ 0.61
SMARCA4-210ENST00000586892 ALS2Q96Q42 1657 aa18.83■□□□□ 0.61
SMARCA4-210ENST00000586892 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.6
SMARCA4-210ENST00000586892 ZNF772Q68DY9 489 aaPredicted RBP18.82■□□□□ 0.6
SMARCA4-210ENST00000586892 MARF1Q9Y4F3 1742 aaKnown RBP18.82■□□□□ 0.6
SMARCA4-210ENST00000586892 ACEP12821 1306 aa18.81■□□□□ 0.6
SMARCA4-210ENST00000586892 ADAMTS2O95450 1211 aa18.81■□□□□ 0.6
SMARCA4-210ENST00000586892 C8orf37Q96NL8 207 aa18.81■□□□□ 0.6
SMARCA4-210ENST00000586892 LMOD2Q6P5Q4 547 aa18.8■□□□□ 0.6
SMARCA4-210ENST00000586892 AFF2P51816 1311 aa18.79■□□□□ 0.6
SMARCA4-210ENST00000586892 POTEAQ6S8J7 498 aa18.79■□□□□ 0.6
SMARCA4-210ENST00000586892 ABCA3Q99758 1704 aa18.79■□□□□ 0.6
SMARCA4-210ENST00000586892 ATAD2Q6PL18 1390 aa18.79■□□□□ 0.6
SMARCA4-210ENST00000586892 NGLY1Q96IV0 654 aa18.78■□□□□ 0.6
SMARCA4-210ENST00000586892 SLC24A1O60721 1099 aa18.77■□□□□ 0.6
SMARCA4-210ENST00000586892 PAK3O75914 559 aaPredicted RBP18.77■□□□□ 0.6
SMARCA4-210ENST00000586892 CABP1Q9NZU7 370 aa18.77■□□□□ 0.6
SMARCA4-210ENST00000586892 ST20-MTHFSA0A0A6YYL1 179 aa18.76■□□□□ 0.59
SMARCA4-210ENST00000586892 HAP1P54257 671 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms