RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 SIRT1Q96EB6 747 aa16.49■□□□□ 0.23
ACTN4-209ENST00000586538 YTHDC2Q9H6S0 1430 aaKnown RBP16.49■□□□□ 0.23
ACTN4-209ENST00000586538 NPHP3Q7Z494 1330 aa16.48■□□□□ 0.23
ACTN4-209ENST00000586538 C14orf93Q9H972 538 aaKnown RBP16.48■□□□□ 0.23
ACTN4-209ENST00000586538 STK26Q9P289 416 aa16.48■□□□□ 0.23
ACTN4-209ENST00000586538 POTEAQ6S8J7 498 aa16.47■□□□□ 0.23
ACTN4-209ENST00000586538 NUTM2BA6NNL0 878 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-209ENST00000586538 NUTM2EB1AL46 878 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-209ENST00000586538 NUTM2AQ8IVF1 878 aaPredicted RBP16.46■□□□□ 0.23
ACTN4-209ENST00000586538 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
ACTN4-209ENST00000586538 SOS2Q07890 1332 aaPredicted RBP16.45■□□□□ 0.22
ACTN4-209ENST00000586538 ESCO1Q5FWF5 840 aa16.45■□□□□ 0.22
ACTN4-209ENST00000586538 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
ACTN4-209ENST00000586538 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
ACTN4-209ENST00000586538 KIF1AQ12756 1690 aa16.43■□□□□ 0.22
ACTN4-209ENST00000586538 DLC1Q96QB1 1528 aa16.43■□□□□ 0.22
ACTN4-209ENST00000586538 WAPLQ7Z5K2 1190 aa16.42■□□□□ 0.22
ACTN4-209ENST00000586538 FMN2Q9NZ56 1722 aa16.42■□□□□ 0.22
ACTN4-209ENST00000586538 CFAP70Q5T0N1 1121 aa16.41■□□□□ 0.22
ACTN4-209ENST00000586538 DDX17Q92841 729 aaKnown RBP16.41■□□□□ 0.22
ACTN4-209ENST00000586538 COL22A1Q8NFW1 1626 aaPredicted RBP16.41■□□□□ 0.22
ACTN4-209ENST00000586538 EIF3AQ14152 1382 aaKnown RBP16.4■□□□□ 0.22
ACTN4-209ENST00000586538 CDK12Q9NYV4 1490 aaPredicted RBP16.4■□□□□ 0.22
ACTN4-209ENST00000586538 AFF2P51816 1311 aa16.4■□□□□ 0.22
ACTN4-209ENST00000586538 RXRBP28702 533 aa16.39■□□□□ 0.21
ACTN4-209ENST00000586538 DCAF11Q8TEB1 546 aa16.39■□□□□ 0.21
ACTN4-209ENST00000586538 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
ACTN4-209ENST00000586538 POGKQ9P215 609 aa16.39■□□□□ 0.21
ACTN4-209ENST00000586538 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
ACTN4-209ENST00000586538 PXDNQ92626 1479 aa16.37■□□□□ 0.21
ACTN4-209ENST00000586538 PRAM1Q96QH2 718 aa16.37■□□□□ 0.21
ACTN4-209ENST00000586538 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
ACTN4-209ENST00000586538 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
ACTN4-209ENST00000586538 FOXO3O43524 673 aa16.36■□□□□ 0.21
ACTN4-209ENST00000586538 NGLY1Q96IV0 654 aa16.36■□□□□ 0.21
ACTN4-209ENST00000586538 ANKARQ7Z5J8 1434 aa16.36■□□□□ 0.21
ACTN4-209ENST00000586538 PSME1Q06323 249 aa16.35■□□□□ 0.21
ACTN4-209ENST00000586538 KDM2AQ9Y2K7 1162 aa16.35■□□□□ 0.21
ACTN4-209ENST00000586538 NUTM2FA1L443 756 aa16.34■□□□□ 0.21
ACTN4-209ENST00000586538 ADAMTS2O95450 1211 aa16.34■□□□□ 0.21
ACTN4-209ENST00000586538 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
ACTN4-209ENST00000586538 PHF8Q9UPP1 1060 aa16.33■□□□□ 0.2
ACTN4-209ENST00000586538 SAFB2Q14151 953 aaKnown RBP eCLIP16.31■□□□□ 0.2
ACTN4-209ENST00000586538 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
ACTN4-209ENST00000586538 TRPC5Q9UL62 973 aaPredicted RBP16.31■□□□□ 0.2
ACTN4-209ENST00000586538 TRAK1Q9UPV9 953 aa16.31■□□□□ 0.2
ACTN4-209ENST00000586538 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
ACTN4-209ENST00000586538 SPATA31A3Q5VYP0 1347 aa16.3■□□□□ 0.2
ACTN4-209ENST00000586538 USP21Q9UK80 565 aa16.3■□□□□ 0.2
ACTN4-209ENST00000586538 MARF1Q9Y4F3 1742 aaKnown RBP16.3■□□□□ 0.2
ACTN4-209ENST00000586538 TNS3Q68CZ2 1445 aa16.29■□□□□ 0.2
ACTN4-209ENST00000586538 ARHGEF10O15013 1369 aa16.29■□□□□ 0.2
ACTN4-209ENST00000586538 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-209ENST00000586538 XPCQ01831 940 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-209ENST00000586538 KRT28Q7Z3Y7 464 aa16.29■□□□□ 0.2
ACTN4-209ENST00000586538 FNBP4Q8N3X1 1017 aaPredicted RBP16.29■□□□□ 0.2
ACTN4-209ENST00000586538 TULP4Q9NRJ4 1543 aa16.29■□□□□ 0.2
ACTN4-209ENST00000586538 SBNO1A3KN83 1393 aa16.28■□□□□ 0.2
ACTN4-209ENST00000586538 GPRASP1Q5JY77 1395 aa16.27■□□□□ 0.2
ACTN4-209ENST00000586538 RGPD8O14715 1765 aaPredicted RBP16.27■□□□□ 0.2
ACTN4-209ENST00000586538 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
ACTN4-209ENST00000586538 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
ACTN4-209ENST00000586538 MINK1Q8N4C8 1332 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-209ENST00000586538 WASLO00401 505 aaPredicted RBP16.25■□□□□ 0.19
ACTN4-209ENST00000586538 USP32Q8NFA0 1604 aa16.24■□□□□ 0.19
ACTN4-209ENST00000586538 RGS12O14924 1447 aa16.24■□□□□ 0.19
ACTN4-209ENST00000586538 ATRNO75882 1429 aa16.24■□□□□ 0.19
ACTN4-209ENST00000586538 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.24■□□□□ 0.19
ACTN4-209ENST00000586538 HIRIP3Q9BW71 556 aaPredicted RBP16.23■□□□□ 0.19
ACTN4-209ENST00000586538 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
ACTN4-209ENST00000586538 UPF1Q92900 1129 aaKnown RBP eCLIP16.22■□□□□ 0.19
ACTN4-209ENST00000586538 NGDNQ8NEJ9 315 aaKnown RBP16.21■□□□□ 0.19
ACTN4-209ENST00000586538 PMFBP1Q8TBY8 1022 aa16.21■□□□□ 0.19
ACTN4-209ENST00000586538 ATAD2Q6PL18 1390 aa16.21■□□□□ 0.19
ACTN4-209ENST00000586538 BCL9LQ86UU0 1499 aa16.2■□□□□ 0.18
ACTN4-209ENST00000586538 SLIT2O94813 1529 aa16.19■□□□□ 0.18
ACTN4-209ENST00000586538 UNC5CLQ8IV45 518 aa16.19■□□□□ 0.18
ACTN4-209ENST00000586538 NWD2Q9ULI1 1742 aa16.18■□□□□ 0.18
ACTN4-209ENST00000586538 ATP7BP35670 1465 aa16.17■□□□□ 0.18
ACTN4-209ENST00000586538 ABCA3Q99758 1704 aa16.17■□□□□ 0.18
ACTN4-209ENST00000586538 TRPM3Q9HCF6 1732 aaPredicted RBP16.17■□□□□ 0.18
ACTN4-209ENST00000586538 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
ACTN4-209ENST00000586538 ALS2Q96Q42 1657 aa16.16■□□□□ 0.18
ACTN4-209ENST00000586538 NUDT16Q96DE0 195 aaKnown RBP16.16■□□□□ 0.18
ACTN4-209ENST00000586538 PRR36Q9H6K5 1346 aa16.16■□□□□ 0.18
ACTN4-209ENST00000586538 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
ACTN4-209ENST00000586538 PLCH1Q4KWH8 1693 aa16.14■□□□□ 0.18
ACTN4-209ENST00000586538 PAK3O75914 559 aaPredicted RBP16.14■□□□□ 0.17
ACTN4-209ENST00000586538 CDK19Q9BWU1 502 aa16.14■□□□□ 0.17
ACTN4-209ENST00000586538 CCDC61Q9Y6R9 512 aa16.14■□□□□ 0.17
ACTN4-209ENST00000586538 TOPAZ1Q8N9V7 1692 aa16.13■□□□□ 0.17
ACTN4-209ENST00000586538 RALGAPBQ86X10 1494 aa16.12■□□□□ 0.17
ACTN4-209ENST00000586538 VPS72Q15906 364 aa16.12■□□□□ 0.17
ACTN4-209ENST00000586538 CCDC125Q86Z20 511 aa16.12■□□□□ 0.17
ACTN4-209ENST00000586538 CABLES1Q8TDN4 633 aa16.12■□□□□ 0.17
ACTN4-209ENST00000586538 COL14A1Q05707 1796 aaKnown RBP16.12■□□□□ 0.17
ACTN4-209ENST00000586538 POLR3AO14802 1390 aaPredicted RBP16.12■□□□□ 0.17
ACTN4-209ENST00000586538 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
ACTN4-209ENST00000586538 NBPF1Q3BBV0 1214 aa16.11■□□□□ 0.17
ACTN4-209ENST00000586538 L3MBTL2Q969R5 705 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms