RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
TREM1-203ENST00000586287 SAFB2Q14151 953 aaKnown RBP eCLIP11.54□□□□□ -0.56
TREM1-203ENST00000586287 POGKQ9P215 609 aa11.54□□□□□ -0.56
TREM1-203ENST00000586287 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
TREM1-203ENST00000586287 NKTRP30414 1462 aaKnown RBP11.52□□□□□ -0.56
TREM1-203ENST00000586287 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
TREM1-203ENST00000586287 DISP3Q9P2K9 1392 aa11.52□□□□□ -0.57
TREM1-203ENST00000586287 SOCS7O14512 581 aa11.51□□□□□ -0.57
TREM1-203ENST00000586287 PROSER2Q86WR7 435 aaPredicted RBP11.51□□□□□ -0.57
TREM1-203ENST00000586287 QRICH2Q9H0J4 1663 aa11.51□□□□□ -0.57
TREM1-203ENST00000586287 MINK1Q8N4C8 1332 aaPredicted RBP11.51□□□□□ -0.57
TREM1-203ENST00000586287 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.51□□□□□ -0.57
TREM1-203ENST00000586287 TULP4Q9NRJ4 1543 aa11.5□□□□□ -0.57
TREM1-203ENST00000586287 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
TREM1-203ENST00000586287 TMF1P82094 1093 aa11.49□□□□□ -0.57
TREM1-203ENST00000586287 KIF7Q2M1P5 1343 aa11.49□□□□□ -0.57
TREM1-203ENST00000586287 WASHC2AQ641Q2 1341 aa11.49□□□□□ -0.57
TREM1-203ENST00000586287 TMEM94Q12767 1356 aa11.49□□□□□ -0.57
TREM1-203ENST00000586287 LRRC7Q96NW7 1537 aa11.49□□□□□ -0.57
TREM1-203ENST00000586287 LTBP4Q8N2S1 1624 aa11.49□□□□□ -0.57
TREM1-203ENST00000586287 WASLO00401 505 aaPredicted RBP11.48□□□□□ -0.57
TREM1-203ENST00000586287 CDK19Q9BWU1 502 aa11.48□□□□□ -0.57
TREM1-203ENST00000586287 CCDC7Q96M83 1385 aa11.48□□□□□ -0.57
TREM1-203ENST00000586287 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
TREM1-203ENST00000586287 ADGRB2O60241 1585 aa11.47□□□□□ -0.57
TREM1-203ENST00000586287 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
TREM1-203ENST00000586287 EVC2Q86UK5 1308 aa11.47□□□□□ -0.57
TREM1-203ENST00000586287 CERKQ8TCT0 537 aa11.47□□□□□ -0.57
TREM1-203ENST00000586287 PUS7Q96PZ0 661 aaKnown RBP11.47□□□□□ -0.57
TREM1-203ENST00000586287 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
TREM1-203ENST00000586287 PRR36Q9H6K5 1346 aa11.45□□□□□ -0.58
TREM1-203ENST00000586287 ILDR2Q71H61 639 aa11.45□□□□□ -0.58
TREM1-203ENST00000586287 C19orf44Q9H6X5 657 aa11.45□□□□□ -0.58
TREM1-203ENST00000586287 NALCNQ8IZF0 1738 aa11.45□□□□□ -0.58
TREM1-203ENST00000586287 SRPK2P78362 688 aaKnown RBP11.44□□□□□ -0.58
TREM1-203ENST00000586287 CDCA8Q53HL2 280 aa11.44□□□□□ -0.58
TREM1-203ENST00000586287 XIRP1Q702N8 1843 aaKnown RBP11.44□□□□□ -0.58
TREM1-203ENST00000586287 NUDT16Q96DE0 195 aaKnown RBP11.43□□□□□ -0.58
TREM1-203ENST00000586287 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
TREM1-203ENST00000586287 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
TREM1-203ENST00000586287 POLR3GLQ9BT43 218 aa11.42□□□□□ -0.58
TREM1-203ENST00000586287 ATAD2Q6PL18 1390 aa11.41□□□□□ -0.58
TREM1-203ENST00000586287 ATP7BP35670 1465 aa11.41□□□□□ -0.58
TREM1-203ENST00000586287 NUTM2FA1L443 756 aa11.41□□□□□ -0.58
TREM1-203ENST00000586287 SLC12A5Q9H2X9 1139 aa11.41□□□□□ -0.58
TREM1-203ENST00000586287 DCCP43146 1447 aa11.41□□□□□ -0.58
TREM1-203ENST00000586287 MSH6P52701 1360 aa11.41□□□□□ -0.58
TREM1-203ENST00000586287 USP32Q8NFA0 1604 aa11.4□□□□□ -0.58
TREM1-203ENST00000586287 DDX10Q13206 875 aaKnown RBP11.4□□□□□ -0.58
TREM1-203ENST00000586287 CCDC61Q9Y6R9 512 aa11.4□□□□□ -0.58
TREM1-203ENST00000586287 ANKARQ7Z5J8 1434 aa11.4□□□□□ -0.58
TREM1-203ENST00000586287 FMN2Q9NZ56 1722 aa11.4□□□□□ -0.58
TREM1-203ENST00000586287 MST1RQ04912 1400 aa11.39□□□□□ -0.59
TREM1-203ENST00000586287 CADPS2Q86UW7 1296 aa11.39□□□□□ -0.59
TREM1-203ENST00000586287 CABP1Q9NZU7 370 aa11.39□□□□□ -0.59
TREM1-203ENST00000586287 MYOM1P52179 1685 aa11.39□□□□□ -0.59
TREM1-203ENST00000586287 PLEKHG3A1L390 1219 aa11.38□□□□□ -0.59
TREM1-203ENST00000586287 ATF3P18847 181 aa11.38□□□□□ -0.59
TREM1-203ENST00000586287 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
TREM1-203ENST00000586287 CD163L1Q9NR16 1453 aa11.38□□□□□ -0.59
TREM1-203ENST00000586287 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
TREM1-203ENST00000586287 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
TREM1-203ENST00000586287 PANK3Q9H999 370 aa11.37□□□□□ -0.59
TREM1-203ENST00000586287 NINLQ9Y2I6 1382 aa11.37□□□□□ -0.59
TREM1-203ENST00000586287 PPIP5K1Q6PFW1 1433 aa11.36□□□□□ -0.59
TREM1-203ENST00000586287 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
TREM1-203ENST00000586287 CARD14Q9BXL6 1004 aa11.36□□□□□ -0.59
TREM1-203ENST00000586287 TOPAZ1Q8N9V7 1692 aa11.36□□□□□ -0.59
TREM1-203ENST00000586287 CPSF1Q10570 1443 aaKnown RBP11.35□□□□□ -0.59
TREM1-203ENST00000586287 PMFBP1Q8TBY8 1022 aa11.35□□□□□ -0.59
TREM1-203ENST00000586287 SLAIN2Q9P270 581 aa11.35□□□□□ -0.59
TREM1-203ENST00000586287 ANKRD36BQ8N2N9 1353 aa11.35□□□□□ -0.59
TREM1-203ENST00000586287 RGPD8O14715 1765 aaPredicted RBP11.35□□□□□ -0.59
TREM1-203ENST00000586287 ACEP12821 1306 aa11.35□□□□□ -0.59
TREM1-203ENST00000586287 A0A1W2PP64 1363 aa11.34□□□□□ -0.59
TREM1-203ENST00000586287 POLR3AO14802 1390 aaPredicted RBP11.34□□□□□ -0.59
TREM1-203ENST00000586287 ESCO1Q5FWF5 840 aa11.34□□□□□ -0.59
TREM1-203ENST00000586287 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
TREM1-203ENST00000586287 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
TREM1-203ENST00000586287 IQSEC2Q5JU85 1478 aa11.32□□□□□ -0.6
TREM1-203ENST00000586287 BRINP3Q76B58 766 aa11.32□□□□□ -0.6
TREM1-203ENST00000586287 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
TREM1-203ENST00000586287 HDGFL2Q7Z4V5 671 aaPredicted RBP11.31□□□□□ -0.6
TREM1-203ENST00000586287 NGDNQ8NEJ9 315 aaKnown RBP11.31□□□□□ -0.6
TREM1-203ENST00000586287 SSH2Q76I76 1423 aa11.31□□□□□ -0.6
TREM1-203ENST00000586287 ITSN1Q15811 1721 aa11.31□□□□□ -0.6
TREM1-203ENST00000586287 FOXO3O43524 673 aa11.3□□□□□ -0.6
TREM1-203ENST00000586287 KTN1Q86UP2 1357 aaKnown RBP11.29□□□□□ -0.6
TREM1-203ENST00000586287 USP6P35125 1406 aa11.29□□□□□ -0.6
TREM1-203ENST00000586287 NSD3Q9BZ95 1437 aa11.29□□□□□ -0.6
TREM1-203ENST00000586287 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
TREM1-203ENST00000586287 DIEXFQ68CQ4 756 aaKnown RBP11.29□□□□□ -0.6
TREM1-203ENST00000586287 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
TREM1-203ENST00000586287 AKAP12Q02952 1782 aa11.28□□□□□ -0.6
TREM1-203ENST00000586287 EDC4Q6P2E9 1401 aaKnown RBP11.28□□□□□ -0.6
TREM1-203ENST00000586287 TOM1O60784 492 aa11.28□□□□□ -0.6
TREM1-203ENST00000586287 KNSTRNQ9Y448 316 aa11.28□□□□□ -0.6
TREM1-203ENST00000586287 TTC21BQ7Z4L5 1316 aa11.28□□□□□ -0.6
TREM1-203ENST00000586287 KIF1AQ12756 1690 aa11.27□□□□□ -0.6
TREM1-203ENST00000586287 MON2Q7Z3U7 1717 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms