RNA–Protein interactions for RNA: ENST00000586177.1

AP3D1-204, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-204ENST00000586177 DLC1Q96QB1 1528 aa24.27■■□□□ 1.48
AP3D1-204ENST00000586177 KNDC1Q76NI1 1749 aa24.26■■□□□ 1.47
AP3D1-204ENST00000586177 ILDR1Q86SU0 546 aaPredicted RBP24.25■■□□□ 1.47
AP3D1-204ENST00000586177 CARD11Q9BXL7 1154 aa24.25■■□□□ 1.47
AP3D1-204ENST00000586177 TRPM1Q7Z4N2 1603 aa24.24■■□□□ 1.47
AP3D1-204ENST00000586177 DCCP43146 1447 aa24.23■■□□□ 1.47
AP3D1-204ENST00000586177 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.22■■□□□ 1.47
AP3D1-204ENST00000586177 RALGAPBQ86X10 1494 aa24.21■■□□□ 1.47
AP3D1-204ENST00000586177 GPRASP1Q5JY77 1395 aa24.21■■□□□ 1.47
AP3D1-204ENST00000586177 MINK1Q8N4C8 1332 aaPredicted RBP24.2■■□□□ 1.46
AP3D1-204ENST00000586177 HIRIP3Q9BW71 556 aaPredicted RBP24.19■■□□□ 1.46
AP3D1-204ENST00000586177 CENPJQ9HC77 1338 aaPredicted RBP24.18■■□□□ 1.46
AP3D1-204ENST00000586177 NALCNQ8IZF0 1738 aa24.17■■□□□ 1.46
AP3D1-204ENST00000586177 NUTM2FA1L443 756 aa24.15■■□□□ 1.46
AP3D1-204ENST00000586177 EIF3AQ14152 1382 aaKnown RBP24.15■■□□□ 1.46
AP3D1-204ENST00000586177 MST1RQ04912 1400 aa24.14■■□□□ 1.45
AP3D1-204ENST00000586177 WASLO00401 505 aaPredicted RBP24.13■■□□□ 1.45
AP3D1-204ENST00000586177 ARHGEF28Q8N1W1 1705 aaKnown RBP24.13■■□□□ 1.45
AP3D1-204ENST00000586177 BRINP3Q76B58 766 aa24.11■■□□□ 1.45
AP3D1-204ENST00000586177 C1orf167Q5SNV9 1468 aa24.11■■□□□ 1.45
AP3D1-204ENST00000586177 CDC42BPGQ6DT37 1551 aa24.11■■□□□ 1.45
AP3D1-204ENST00000586177 ESCO1Q5FWF5 840 aa24.1■■□□□ 1.45
AP3D1-204ENST00000586177 ORAI2Q96SN7 254 aa24.1■■□□□ 1.45
AP3D1-204ENST00000586177 HSPA1LP34931 641 aa24.09■■□□□ 1.45
AP3D1-204ENST00000586177 CDK19Q9BWU1 502 aa24.09■■□□□ 1.45
AP3D1-204ENST00000586177 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
AP3D1-204ENST00000586177 ROBO1Q9Y6N7 1651 aa24.04■■□□□ 1.44
AP3D1-204ENST00000586177 ADGRB2O60241 1585 aa24.03■■□□□ 1.44
AP3D1-204ENST00000586177 SRPK2P78362 688 aaKnown RBP24.03■■□□□ 1.44
AP3D1-204ENST00000586177 EVC2Q86UK5 1308 aa24.03■■□□□ 1.44
AP3D1-204ENST00000586177 USP47Q96K76 1375 aa24.03■■□□□ 1.44
AP3D1-204ENST00000586177 NUDT16Q96DE0 195 aaKnown RBP24.02■■□□□ 1.44
AP3D1-204ENST00000586177 FMN2Q9NZ56 1722 aa24.01■■□□□ 1.43
AP3D1-204ENST00000586177 ANKARQ7Z5J8 1434 aa24.01■■□□□ 1.43
AP3D1-204ENST00000586177 DDX17Q92841 729 aaKnown RBP24■■□□□ 1.43
AP3D1-204ENST00000586177 CABP2Q9NPB3 220 aa24■■□□□ 1.43
AP3D1-204ENST00000586177 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
AP3D1-204ENST00000586177 PRR36Q9H6K5 1346 aa24■■□□□ 1.43
AP3D1-204ENST00000586177 QRICH2Q9H0J4 1663 aa23.99■■□□□ 1.43
AP3D1-204ENST00000586177 FOXO3O43524 673 aa23.98■■□□□ 1.43
AP3D1-204ENST00000586177 SLC24A1O60721 1099 aa23.98■■□□□ 1.43
AP3D1-204ENST00000586177 SBNO2Q9Y2G9 1366 aa23.98■■□□□ 1.43
AP3D1-204ENST00000586177 PMFBP1Q8TBY8 1022 aa23.97■■□□□ 1.43
AP3D1-204ENST00000586177 TESK2Q96S53 571 aa23.97■■□□□ 1.43
AP3D1-204ENST00000586177 TULP4Q9NRJ4 1543 aa23.97■■□□□ 1.43
AP3D1-204ENST00000586177 EIF4G2P78344 907 aaKnown RBP eCLIP23.96■■□□□ 1.43
AP3D1-204ENST00000586177 CCDC61Q9Y6R9 512 aa23.96■■□□□ 1.43
AP3D1-204ENST00000586177 NPHP3Q7Z494 1330 aa23.94■■□□□ 1.42
AP3D1-204ENST00000586177 PSME1Q06323 249 aa23.92■■□□□ 1.42
AP3D1-204ENST00000586177 NGDNQ8NEJ9 315 aaKnown RBP23.92■■□□□ 1.42
AP3D1-204ENST00000586177 HSPA5P11021 654 aaKnown RBP23.91■■□□□ 1.42
AP3D1-204ENST00000586177 XPCQ01831 940 aaPredicted RBP23.91■■□□□ 1.42
AP3D1-204ENST00000586177 LRRC59Q96AG4 307 aaKnown RBP23.91■■□□□ 1.42
AP3D1-204ENST00000586177 ATP7BP35670 1465 aa23.91■■□□□ 1.42
AP3D1-204ENST00000586177 AHDC1Q5TGY3 1603 aaPredicted RBP23.91■■□□□ 1.42
AP3D1-204ENST00000586177 USP32Q8NFA0 1604 aa23.91■■□□□ 1.42
AP3D1-204ENST00000586177 SOS2Q07890 1332 aaPredicted RBP23.9■■□□□ 1.42
AP3D1-204ENST00000586177 TMF1P82094 1093 aa23.9■■□□□ 1.42
AP3D1-204ENST00000586177 KRT28Q7Z3Y7 464 aa23.9■■□□□ 1.42
AP3D1-204ENST00000586177 PLEKHG3A1L390 1219 aa23.89■■□□□ 1.41
AP3D1-204ENST00000586177 CABP1Q9NZU7 370 aa23.89■■□□□ 1.41
AP3D1-204ENST00000586177 PHLPP1O60346 1717 aa23.88■■□□□ 1.41
AP3D1-204ENST00000586177 PUS7Q96PZ0 661 aaKnown RBP23.88■■□□□ 1.41
AP3D1-204ENST00000586177 RGPD8O14715 1765 aaPredicted RBP23.88■■□□□ 1.41
AP3D1-204ENST00000586177 ATAD2Q6PL18 1390 aa23.86■■□□□ 1.41
AP3D1-204ENST00000586177 ACEP12821 1306 aa23.85■■□□□ 1.41
AP3D1-204ENST00000586177 PPIP5K1Q6PFW1 1433 aa23.85■■□□□ 1.41
AP3D1-204ENST00000586177 NHSL1Q5SYE7 1610 aa23.85■■□□□ 1.41
AP3D1-204ENST00000586177 KIF1AQ12756 1690 aa23.85■■□□□ 1.41
AP3D1-204ENST00000586177 JCADQ9P266 1359 aa23.84■■□□□ 1.41
AP3D1-204ENST00000586177 CDCA8Q53HL2 280 aa23.83■■□□□ 1.41
AP3D1-204ENST00000586177 TMC1Q8TDI8 760 aa23.83■■□□□ 1.41
AP3D1-204ENST00000586177 COL16A1Q07092 1604 aaPredicted RBP23.83■■□□□ 1.41
AP3D1-204ENST00000586177 DISP3Q9P2K9 1392 aa23.82■■□□□ 1.4
AP3D1-204ENST00000586177 ZEB1P37275 1124 aaPredicted RBP23.82■■□□□ 1.4
AP3D1-204ENST00000586177 PXDNQ92626 1479 aa23.81■■□□□ 1.4
AP3D1-204ENST00000586177 POLR3AO14802 1390 aaPredicted RBP23.8■■□□□ 1.4
AP3D1-204ENST00000586177 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
AP3D1-204ENST00000586177 SPATA31A3Q5VYP0 1347 aa23.79■■□□□ 1.4
AP3D1-204ENST00000586177 PAK3O75914 559 aaPredicted RBP23.78■■□□□ 1.4
AP3D1-204ENST00000586177 LMOD2Q6P5Q4 547 aa23.78■■□□□ 1.4
AP3D1-204ENST00000586177 ZNF692Q9BU19 519 aaPredicted RBP23.78■■□□□ 1.4
AP3D1-204ENST00000586177 ITSN1Q15811 1721 aa23.78■■□□□ 1.4
AP3D1-204ENST00000586177 SBNO1A3KN83 1393 aa23.78■■□□□ 1.4
AP3D1-204ENST00000586177 TOPAZ1Q8N9V7 1692 aa23.76■■□□□ 1.39
AP3D1-204ENST00000586177 PNPLA6Q8IY17 1366 aa23.76■■□□□ 1.39
AP3D1-204ENST00000586177 SPATA31A6Q5VVP1 1343 aa23.75■■□□□ 1.39
AP3D1-204ENST00000586177 POLR3GLQ9BT43 218 aa23.74■■□□□ 1.39
AP3D1-204ENST00000586177 NUTM2BA6NNL0 878 aaPredicted RBP23.73■■□□□ 1.39
AP3D1-204ENST00000586177 NUTM2EB1AL46 878 aaPredicted RBP23.73■■□□□ 1.39
AP3D1-204ENST00000586177 HDGFL2Q7Z4V5 671 aaPredicted RBP23.73■■□□□ 1.39
AP3D1-204ENST00000586177 NUTM2AQ8IVF1 878 aaPredicted RBP23.73■■□□□ 1.39
AP3D1-204ENST00000586177 TERF2IPQ9NYB0 399 aa23.73■■□□□ 1.39
AP3D1-204ENST00000586177 TNS3Q68CZ2 1445 aa23.72■■□□□ 1.39
AP3D1-204ENST00000586177 NINLQ9Y2I6 1382 aa23.71■■□□□ 1.39
AP3D1-204ENST00000586177 ARHGEF10O15013 1369 aa23.7■■□□□ 1.38
AP3D1-204ENST00000586177 C11orf95C9JLR9 678 aaPredicted RBP23.7■■□□□ 1.38
AP3D1-204ENST00000586177 CPSF1Q10570 1443 aaKnown RBP23.69■■□□□ 1.38
AP3D1-204ENST00000586177 BRD4O60885 1362 aaPredicted RBP23.69■■□□□ 1.38
AP3D1-204ENST00000586177 KTN1Q86UP2 1357 aaKnown RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms