RNA–Protein interactions for RNA: ENST00000586002.3

PCSK4-203, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 3

Gene PCSK4, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-203ENST00000586002 CARD11Q9BXL7 1154 aa24.82■■□□□ 1.56
PCSK4-203ENST00000586002 KNDC1Q76NI1 1749 aa24.81■■□□□ 1.56
PCSK4-203ENST00000586002 SCAF1Q9H7N4 1312 aaKnown RBP24.8■■□□□ 1.56
PCSK4-203ENST00000586002 GPRASP1Q5JY77 1395 aa24.8■■□□□ 1.56
PCSK4-203ENST00000586002 TRPM1Q7Z4N2 1603 aa24.79■■□□□ 1.56
PCSK4-203ENST00000586002 DCCP43146 1447 aa24.79■■□□□ 1.56
PCSK4-203ENST00000586002 ILDR1Q86SU0 546 aaPredicted RBP24.78■■□□□ 1.56
PCSK4-203ENST00000586002 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.77■■□□□ 1.56
PCSK4-203ENST00000586002 RALGAPBQ86X10 1494 aa24.76■■□□□ 1.55
PCSK4-203ENST00000586002 MINK1Q8N4C8 1332 aaPredicted RBP24.75■■□□□ 1.55
PCSK4-203ENST00000586002 CENPJQ9HC77 1338 aaPredicted RBP24.74■■□□□ 1.55
PCSK4-203ENST00000586002 HIRIP3Q9BW71 556 aaPredicted RBP24.72■■□□□ 1.55
PCSK4-203ENST00000586002 EIF3AQ14152 1382 aaKnown RBP24.7■■□□□ 1.55
PCSK4-203ENST00000586002 WASLO00401 505 aaPredicted RBP24.7■■□□□ 1.54
PCSK4-203ENST00000586002 NALCNQ8IZF0 1738 aa24.69■■□□□ 1.54
PCSK4-203ENST00000586002 MST1RQ04912 1400 aa24.69■■□□□ 1.54
PCSK4-203ENST00000586002 NUTM2FA1L443 756 aa24.67■■□□□ 1.54
PCSK4-203ENST00000586002 ARHGEF28Q8N1W1 1705 aaKnown RBP24.66■■□□□ 1.54
PCSK4-203ENST00000586002 BRINP3Q76B58 766 aa24.66■■□□□ 1.54
PCSK4-203ENST00000586002 C1orf167Q5SNV9 1468 aa24.65■■□□□ 1.54
PCSK4-203ENST00000586002 ESCO1Q5FWF5 840 aa24.65■■□□□ 1.54
PCSK4-203ENST00000586002 ORAI2Q96SN7 254 aa24.65■■□□□ 1.54
PCSK4-203ENST00000586002 CDK19Q9BWU1 502 aa24.65■■□□□ 1.54
PCSK4-203ENST00000586002 CDC42BPGQ6DT37 1551 aa24.64■■□□□ 1.54
PCSK4-203ENST00000586002 HSPA1LP34931 641 aa24.62■■□□□ 1.53
PCSK4-203ENST00000586002 ST20-MTHFSA0A0A6YYL1 179 aa24.61■■□□□ 1.53
PCSK4-203ENST00000586002 SLC24A1O60721 1099 aa24.61■■□□□ 1.53
PCSK4-203ENST00000586002 EVC2Q86UK5 1308 aa24.6■■□□□ 1.53
PCSK4-203ENST00000586002 NUDT16Q96DE0 195 aaKnown RBP24.59■■□□□ 1.53
PCSK4-203ENST00000586002 ADGRB2O60241 1585 aa24.58■■□□□ 1.52
PCSK4-203ENST00000586002 USP47Q96K76 1375 aa24.57■■□□□ 1.52
PCSK4-203ENST00000586002 SRPK2P78362 688 aaKnown RBP24.57■■□□□ 1.52
PCSK4-203ENST00000586002 ROBO1Q9Y6N7 1651 aa24.56■■□□□ 1.52
PCSK4-203ENST00000586002 ANKARQ7Z5J8 1434 aa24.56■■□□□ 1.52
PCSK4-203ENST00000586002 PHF8Q9UPP1 1060 aa24.56■■□□□ 1.52
PCSK4-203ENST00000586002 SBNO2Q9Y2G9 1366 aa24.55■■□□□ 1.52
PCSK4-203ENST00000586002 CABP2Q9NPB3 220 aa24.55■■□□□ 1.52
PCSK4-203ENST00000586002 PRR36Q9H6K5 1346 aa24.55■■□□□ 1.52
PCSK4-203ENST00000586002 FMN2Q9NZ56 1722 aa24.55■■□□□ 1.52
PCSK4-203ENST00000586002 CCDC61Q9Y6R9 512 aa24.54■■□□□ 1.52
PCSK4-203ENST00000586002 FOXO3O43524 673 aa24.53■■□□□ 1.52
PCSK4-203ENST00000586002 EIF4G2P78344 907 aaKnown RBP eCLIP24.53■■□□□ 1.52
PCSK4-203ENST00000586002 TESK2Q96S53 571 aa24.53■■□□□ 1.52
PCSK4-203ENST00000586002 DDX17Q92841 729 aaKnown RBP24.52■■□□□ 1.52
PCSK4-203ENST00000586002 QRICH2Q9H0J4 1663 aa24.51■■□□□ 1.51
PCSK4-203ENST00000586002 PMFBP1Q8TBY8 1022 aa24.51■■□□□ 1.51
PCSK4-203ENST00000586002 NPHP3Q7Z494 1330 aa24.51■■□□□ 1.51
PCSK4-203ENST00000586002 TULP4Q9NRJ4 1543 aa24.51■■□□□ 1.51
PCSK4-203ENST00000586002 PUS7Q96PZ0 661 aaKnown RBP24.49■■□□□ 1.51
PCSK4-203ENST00000586002 PLEKHG3A1L390 1219 aa24.48■■□□□ 1.51
PCSK4-203ENST00000586002 NGDNQ8NEJ9 315 aaKnown RBP24.48■■□□□ 1.51
PCSK4-203ENST00000586002 LRRC59Q96AG4 307 aaKnown RBP24.48■■□□□ 1.51
PCSK4-203ENST00000586002 HSPA5P11021 654 aaKnown RBP24.47■■□□□ 1.51
PCSK4-203ENST00000586002 TMF1P82094 1093 aa24.47■■□□□ 1.51
PCSK4-203ENST00000586002 PSME1Q06323 249 aa24.47■■□□□ 1.51
PCSK4-203ENST00000586002 SOS2Q07890 1332 aaPredicted RBP24.46■■□□□ 1.51
PCSK4-203ENST00000586002 KRT28Q7Z3Y7 464 aa24.46■■□□□ 1.51
PCSK4-203ENST00000586002 AHDC1Q5TGY3 1603 aaPredicted RBP24.45■■□□□ 1.5
PCSK4-203ENST00000586002 RGPD8O14715 1765 aaPredicted RBP24.44■■□□□ 1.5
PCSK4-203ENST00000586002 CABP1Q9NZU7 370 aa24.44■■□□□ 1.5
PCSK4-203ENST00000586002 ATP7BP35670 1465 aa24.44■■□□□ 1.5
PCSK4-203ENST00000586002 USP32Q8NFA0 1604 aa24.43■■□□□ 1.5
PCSK4-203ENST00000586002 ZEB1P37275 1124 aaPredicted RBP24.43■■□□□ 1.5
PCSK4-203ENST00000586002 XPCQ01831 940 aaPredicted RBP24.43■■□□□ 1.5
PCSK4-203ENST00000586002 CDCA8Q53HL2 280 aa24.42■■□□□ 1.5
PCSK4-203ENST00000586002 ATAD2Q6PL18 1390 aa24.42■■□□□ 1.5
PCSK4-203ENST00000586002 PHLPP1O60346 1717 aa24.41■■□□□ 1.5
PCSK4-203ENST00000586002 ACEP12821 1306 aa24.41■■□□□ 1.5
PCSK4-203ENST00000586002 PPIP5K1Q6PFW1 1433 aa24.39■■□□□ 1.5
PCSK4-203ENST00000586002 JCADQ9P266 1359 aa24.39■■□□□ 1.49
PCSK4-203ENST00000586002 NHSL1Q5SYE7 1610 aa24.39■■□□□ 1.49
PCSK4-203ENST00000586002 KIF1AQ12756 1690 aa24.38■■□□□ 1.49
PCSK4-203ENST00000586002 TMC1Q8TDI8 760 aa24.37■■□□□ 1.49
PCSK4-203ENST00000586002 ZNF692Q9BU19 519 aaPredicted RBP24.37■■□□□ 1.49
PCSK4-203ENST00000586002 POLR3AO14802 1390 aaPredicted RBP24.36■■□□□ 1.49
PCSK4-203ENST00000586002 COL16A1Q07092 1604 aaPredicted RBP24.35■■□□□ 1.49
PCSK4-203ENST00000586002 PXDNQ92626 1479 aa24.35■■□□□ 1.49
PCSK4-203ENST00000586002 DISP3Q9P2K9 1392 aa24.35■■□□□ 1.49
PCSK4-203ENST00000586002 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
PCSK4-203ENST00000586002 SLC12A5Q9H2X9 1139 aa24.34■■□□□ 1.49
PCSK4-203ENST00000586002 SBNO1A3KN83 1393 aa24.33■■□□□ 1.49
PCSK4-203ENST00000586002 ITSN1Q15811 1721 aa24.32■■□□□ 1.48
PCSK4-203ENST00000586002 PAK3O75914 559 aaPredicted RBP24.32■■□□□ 1.48
PCSK4-203ENST00000586002 LMOD2Q6P5Q4 547 aa24.31■■□□□ 1.48
PCSK4-203ENST00000586002 TERF2IPQ9NYB0 399 aa24.3■■□□□ 1.48
PCSK4-203ENST00000586002 SPATA31A6Q5VVP1 1343 aa24.3■■□□□ 1.48
PCSK4-203ENST00000586002 HDGFL2Q7Z4V5 671 aaPredicted RBP24.29■■□□□ 1.48
PCSK4-203ENST00000586002 TOPAZ1Q8N9V7 1692 aa24.29■■□□□ 1.48
PCSK4-203ENST00000586002 BRD4O60885 1362 aaPredicted RBP24.29■■□□□ 1.48
PCSK4-203ENST00000586002 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
PCSK4-203ENST00000586002 NINLQ9Y2I6 1382 aa24.28■■□□□ 1.48
PCSK4-203ENST00000586002 POLR3GLQ9BT43 218 aa24.26■■□□□ 1.47
PCSK4-203ENST00000586002 NUTM2BA6NNL0 878 aaPredicted RBP24.25■■□□□ 1.47
PCSK4-203ENST00000586002 NUTM2EB1AL46 878 aaPredicted RBP24.25■■□□□ 1.47
PCSK4-203ENST00000586002 C11orf95C9JLR9 678 aaPredicted RBP24.25■■□□□ 1.47
PCSK4-203ENST00000586002 NUTM2AQ8IVF1 878 aaPredicted RBP24.25■■□□□ 1.47
PCSK4-203ENST00000586002 ARHGEF10O15013 1369 aa24.25■■□□□ 1.47
PCSK4-203ENST00000586002 CPSF1Q10570 1443 aaKnown RBP24.25■■□□□ 1.47
PCSK4-203ENST00000586002 TNS3Q68CZ2 1445 aa24.25■■□□□ 1.47
PCSK4-203ENST00000586002 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms