RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 SLC4A1APQ9BWU0 796 aaKnown RBP34.23■■■■□ 3.07
LSM7-203ENST00000585409 RAB3GAP2Q9H2M9 1393 aa34.21■■■■□ 3.07
LSM7-203ENST00000585409 HRCP23327 699 aa34.2■■■■□ 3.07
LSM7-203ENST00000585409 FNBP4Q8N3X1 1017 aaPredicted RBP34.16■■■■□ 3.06
LSM7-203ENST00000585409 USP21Q9UK80 565 aa34.16■■■■□ 3.06
LSM7-203ENST00000585409 MYOM2P54296 1465 aa34.15■■■■□ 3.06
LSM7-203ENST00000585409 MARF1Q9Y4F3 1742 aaKnown RBP34.15■■■■□ 3.06
LSM7-203ENST00000585409 PXDNQ92626 1479 aa34.14■■■■□ 3.06
LSM7-203ENST00000585409 IFT172Q9UG01 1749 aa34.14■■■■□ 3.06
LSM7-203ENST00000585409 TRPC5Q9UL62 973 aaPredicted RBP34.13■■■■□ 3.05
LSM7-203ENST00000585409 NPHP3Q7Z494 1330 aa34.12■■■■□ 3.05
LSM7-203ENST00000585409 TECPR2O15040 1411 aa34.12■■■■□ 3.05
LSM7-203ENST00000585409 ATRNO75882 1429 aa34.12■■■■□ 3.05
LSM7-203ENST00000585409 ATAD2Q6PL18 1390 aa34.1■■■■□ 3.05
LSM7-203ENST00000585409 ADGRF5Q8IZF2 1346 aa34.09■■■■□ 3.05
LSM7-203ENST00000585409 ESCO1Q5FWF5 840 aa34.09■■■■□ 3.05
LSM7-203ENST00000585409 KNDC1Q76NI1 1749 aa34.09■■■■□ 3.05
LSM7-203ENST00000585409 SPATA31E1Q6ZUB1 1445 aa34.08■■■■□ 3.05
LSM7-203ENST00000585409 FOXD1Q16676 465 aa34.08■■■■□ 3.05
LSM7-203ENST00000585409 CCDC144AA2RUR9 1427 aa34.06■■■■□ 3.04
LSM7-203ENST00000585409 BCL9LQ86UU0 1499 aa34.04■■■■□ 3.04
LSM7-203ENST00000585409 LRPPRCP42704 1394 aaKnown RBP34.04■■■■□ 3.04
LSM7-203ENST00000585409 MPHOSPH9Q99550 1183 aa34.04■■■■□ 3.04
LSM7-203ENST00000585409 ANKRD30BQ9BXX2 1392 aa34.03■■■■□ 3.04
LSM7-203ENST00000585409 FOXO3O43524 673 aa34.02■■■■□ 3.04
LSM7-203ENST00000585409 FMN2Q9NZ56 1722 aa34.01■■■■□ 3.04
LSM7-203ENST00000585409 ABCC11Q96J66 1382 aa34.01■■■■□ 3.04
LSM7-203ENST00000585409 WAPLQ7Z5K2 1190 aa34■■■■□ 3.03
LSM7-203ENST00000585409 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.99■■■■□ 3.03
LSM7-203ENST00000585409 PIK3C2GO75747 1445 aa33.99■■■■□ 3.03
LSM7-203ENST00000585409 EP400Q96L91 3159 aa33.98■■■■□ 3.03
LSM7-203ENST00000585409 XPCQ01831 940 aaPredicted RBP33.98■■■■□ 3.03
LSM7-203ENST00000585409 RGL3Q3MIN7 710 aa33.98■■■■□ 3.03
LSM7-203ENST00000585409 STK26Q9P289 416 aa33.98■■■■□ 3.03
LSM7-203ENST00000585409 KIF1AQ12756 1690 aa33.97■■■■□ 3.03
LSM7-203ENST00000585409 PLEKHH1Q9ULM0 1364 aa33.97■■■■□ 3.03
LSM7-203ENST00000585409 NUTM2FA1L443 756 aa33.93■■■■□ 3.02
LSM7-203ENST00000585409 TMEM132EQ6IEE7 984 aa33.93■■■■□ 3.02
LSM7-203ENST00000585409 YTHDC2Q9H6S0 1430 aaKnown RBP33.92■■■■□ 3.02
LSM7-203ENST00000585409 GJD4Q96KN9 370 aaPredicted RBP33.9■■■■□ 3.02
LSM7-203ENST00000585409 SRCAPQ6ZRS2 3230 aa33.89■■■■□ 3.02
LSM7-203ENST00000585409 SPATA31A3Q5VYP0 1347 aa33.89■■■■□ 3.02
LSM7-203ENST00000585409 SLIT2O94813 1529 aa33.89■■■■□ 3.02
LSM7-203ENST00000585409 RGPD8O14715 1765 aaPredicted RBP33.88■■■■□ 3.01
LSM7-203ENST00000585409 USP32Q8NFA0 1604 aa33.87■■■■□ 3.01
LSM7-203ENST00000585409 SIRT1Q96EB6 747 aa33.87■■■■□ 3.01
LSM7-203ENST00000585409 GLI3P10071 1580 aa33.86■■■■□ 3.01
LSM7-203ENST00000585409 CCDC125Q86Z20 511 aa33.86■■■■□ 3.01
LSM7-203ENST00000585409 NRXN1Q9ULB1 1477 aa33.84■■■■□ 3.01
LSM7-203ENST00000585409 RALGAPBQ86X10 1494 aa33.82■■■■□ 3.01
LSM7-203ENST00000585409 UNC5CLQ8IV45 518 aa33.82■■■■□ 3
LSM7-203ENST00000585409 C14orf93Q9H972 538 aaKnown RBP33.81■■■■□ 3
LSM7-203ENST00000585409 KRT28Q7Z3Y7 464 aa33.8■■■■□ 3
LSM7-203ENST00000585409 ZRANB1Q9UGI0 708 aa33.79■■■■□ 3
LSM7-203ENST00000585409 BRWD3Q6RI45 1802 aa33.79■■■■□ 3
LSM7-203ENST00000585409 TNS3Q68CZ2 1445 aa33.78■■■■□ 3
LSM7-203ENST00000585409 PCGF6Q9BYE7 350 aa33.77■■■■□ 3
LSM7-203ENST00000585409 ABCA3Q99758 1704 aa33.76■■■■□ 3
LSM7-203ENST00000585409 PLCH1Q4KWH8 1693 aa33.75■■■□□ 2.99
LSM7-203ENST00000585409 PHF8Q9UPP1 1060 aa33.75■■■□□ 2.99
LSM7-203ENST00000585409 NWD2Q9ULI1 1742 aa33.75■■■□□ 2.99
LSM7-203ENST00000585409 DHX57Q6P158 1386 aaKnown RBP33.73■■■□□ 2.99
LSM7-203ENST00000585409 SBNO1A3KN83 1393 aa33.72■■■□□ 2.99
LSM7-203ENST00000585409 PSME1Q06323 249 aa33.71■■■□□ 2.99
LSM7-203ENST00000585409 CFAP70Q5T0N1 1121 aa33.71■■■□□ 2.99
LSM7-203ENST00000585409 BLMP54132 1417 aaPredicted RBP33.7■■■□□ 2.99
LSM7-203ENST00000585409 DLC1Q96QB1 1528 aa33.7■■■□□ 2.99
LSM7-203ENST00000585409 VPS72Q15906 364 aa33.67■■■□□ 2.98
LSM7-203ENST00000585409 ADGRB2O60241 1585 aa33.67■■■□□ 2.98
LSM7-203ENST00000585409 CABLES1Q8TDN4 633 aa33.66■■■□□ 2.98
LSM7-203ENST00000585409 PRAM1Q96QH2 718 aa33.66■■■□□ 2.98
LSM7-203ENST00000585409 ANKARQ7Z5J8 1434 aa33.65■■■□□ 2.98
LSM7-203ENST00000585409 ARHGEF10O15013 1369 aa33.65■■■□□ 2.98
LSM7-203ENST00000585409 HAP1P54257 671 aaPredicted RBP33.64■■■□□ 2.98
LSM7-203ENST00000585409 TRPM3Q9HCF6 1732 aaPredicted RBP33.62■■■□□ 2.97
LSM7-203ENST00000585409 ONECUT3O60422 494 aaPredicted RBP33.62■■■□□ 2.97
LSM7-203ENST00000585409 SEPT12Q8IYM1 358 aa33.62■■■□□ 2.97
LSM7-203ENST00000585409 ADGRB1O14514 1584 aa33.62■■■□□ 2.97
LSM7-203ENST00000585409 SAFB2Q14151 953 aaKnown RBP eCLIP33.61■■■□□ 2.97
LSM7-203ENST00000585409 NRAPQ86VF7 1730 aa33.59■■■□□ 2.97
LSM7-203ENST00000585409 ALS2Q96Q42 1657 aa33.58■■■□□ 2.97
LSM7-203ENST00000585409 FAM83GA6ND36 823 aa33.55■■■□□ 2.96
LSM7-203ENST00000585409 LMOD2Q6P5Q4 547 aa33.55■■■□□ 2.96
LSM7-203ENST00000585409 PMFBP1Q8TBY8 1022 aa33.55■■■□□ 2.96
LSM7-203ENST00000585409 POGKQ9P215 609 aa33.55■■■□□ 2.96
LSM7-203ENST00000585409 PLEKHG5O94827 1062 aa33.54■■■□□ 2.96
LSM7-203ENST00000585409 DEFB132Q7Z7B7 95 aa33.54■■■□□ 2.96
LSM7-203ENST00000585409 CCDC9Q9Y3X0 531 aaKnown RBP33.52■■■□□ 2.96
LSM7-203ENST00000585409 KRT27Q7Z3Y8 459 aa33.51■■■□□ 2.95
LSM7-203ENST00000585409 COL14A1Q05707 1796 aaKnown RBP33.5■■■□□ 2.95
LSM7-203ENST00000585409 TULP4Q9NRJ4 1543 aa33.5■■■□□ 2.95
LSM7-203ENST00000585409 CRYBG1Q9Y4K1 1723 aa33.5■■■□□ 2.95
LSM7-203ENST00000585409 SF3B2Q13435 895 aaKnown RBP33.49■■■□□ 2.95
LSM7-203ENST00000585409 EIF3AQ14152 1382 aaKnown RBP33.47■■■□□ 2.95
LSM7-203ENST00000585409 TRAK1Q9UPV9 953 aa33.47■■■□□ 2.95
LSM7-203ENST00000585409 PRR36Q9H6K5 1346 aa33.47■■■□□ 2.95
LSM7-203ENST00000585409 GPRASP1Q5JY77 1395 aa33.46■■■□□ 2.95
LSM7-203ENST00000585409 HIRIP3Q9BW71 556 aaPredicted RBP33.45■■■□□ 2.95
LSM7-203ENST00000585409 LRP5O75197 1615 aa33.43■■■□□ 2.94
LSM7-203ENST00000585409 MINK1Q8N4C8 1332 aaPredicted RBP33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms