RNA–Protein interactions for RNA: ENST00000585098.5

NDEL1-219, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3 BASIC

Gene NDEL1, Length 454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-219ENST00000585098 TRAK1Q9UPV9 953 aa34.2■■■■□ 3.07
NDEL1-219ENST00000585098 CDC42BPGQ6DT37 1551 aa34.19■■■■□ 3.06
NDEL1-219ENST00000585098 DLC1Q96QB1 1528 aa34.18■■■■□ 3.06
NDEL1-219ENST00000585098 AHDC1Q5TGY3 1603 aaPredicted RBP34.18■■■■□ 3.06
NDEL1-219ENST00000585098 POGKQ9P215 609 aa34.17■■■■□ 3.06
NDEL1-219ENST00000585098 SAFB2Q14151 953 aaKnown RBP eCLIP34.16■■■■□ 3.06
NDEL1-219ENST00000585098 COL16A1Q07092 1604 aaPredicted RBP34.15■■■■□ 3.06
NDEL1-219ENST00000585098 MED1Q15648 1581 aaPredicted RBP34.15■■■■□ 3.06
NDEL1-219ENST00000585098 ORAI2Q96SN7 254 aa34.14■■■■□ 3.06
NDEL1-219ENST00000585098 NUTM2FA1L443 756 aa34.1■■■■□ 3.05
NDEL1-219ENST00000585098 DDX17Q92841 729 aaKnown RBP34.1■■■■□ 3.05
NDEL1-219ENST00000585098 PCGF6Q9BYE7 350 aa34.1■■■■□ 3.05
NDEL1-219ENST00000585098 JCADQ9P266 1359 aa34.1■■■■□ 3.05
NDEL1-219ENST00000585098 NBPF1Q3BBV0 1214 aa34.09■■■■□ 3.05
NDEL1-219ENST00000585098 KIAA1210Q9ULL0 1709 aa34.09■■■■□ 3.05
NDEL1-219ENST00000585098 ESCO1Q5FWF5 840 aa34.07■■■■□ 3.04
NDEL1-219ENST00000585098 NHSL1Q5SYE7 1610 aa34.07■■■■□ 3.04
NDEL1-219ENST00000585098 FMN2Q9NZ56 1722 aa34.03■■■■□ 3.04
NDEL1-219ENST00000585098 MINK1Q8N4C8 1332 aaPredicted RBP34.02■■■■□ 3.04
NDEL1-219ENST00000585098 HIRIP3Q9BW71 556 aaPredicted RBP34■■■■□ 3.03
NDEL1-219ENST00000585098 LRRC59Q96AG4 307 aaKnown RBP33.99■■■■□ 3.03
NDEL1-219ENST00000585098 PHF23Q9BUL5 403 aaPredicted RBP33.98■■■■□ 3.03
NDEL1-219ENST00000585098 ARHGEF28Q8N1W1 1705 aaKnown RBP33.98■■■■□ 3.03
NDEL1-219ENST00000585098 TONSLQ96HA7 1378 aa33.98■■■■□ 3.03
NDEL1-219ENST00000585098 ADGRB2O60241 1585 aa33.97■■■■□ 3.03
NDEL1-219ENST00000585098 SOS2Q07890 1332 aaPredicted RBP33.95■■■■□ 3.03
NDEL1-219ENST00000585098 FOXO3O43524 673 aa33.94■■■■□ 3.02
NDEL1-219ENST00000585098 SPATA31A6Q5VVP1 1343 aa33.94■■■■□ 3.02
NDEL1-219ENST00000585098 NPHP3Q7Z494 1330 aa33.94■■■■□ 3.02
NDEL1-219ENST00000585098 SHPRHQ149N8 1683 aa33.93■■■■□ 3.02
NDEL1-219ENST00000585098 WASLO00401 505 aaPredicted RBP33.91■■■■□ 3.02
NDEL1-219ENST00000585098 NBPF8Q3BBV2 869 aa33.91■■■■□ 3.02
NDEL1-219ENST00000585098 TRPM1Q7Z4N2 1603 aa33.9■■■■□ 3.02
NDEL1-219ENST00000585098 ILDR2Q71H61 639 aa33.9■■■■□ 3.02
NDEL1-219ENST00000585098 ANKARQ7Z5J8 1434 aa33.88■■■■□ 3.01
NDEL1-219ENST00000585098 ROCK2O75116 1388 aaKnown RBP33.88■■■■□ 3.01
NDEL1-219ENST00000585098 XPCQ01831 940 aaPredicted RBP33.88■■■■□ 3.01
NDEL1-219ENST00000585098 PHF8Q9UPP1 1060 aa33.88■■■■□ 3.01
NDEL1-219ENST00000585098 PNPLA6Q8IY17 1366 aa33.87■■■■□ 3.01
NDEL1-219ENST00000585098 EIF3AQ14152 1382 aaKnown RBP33.86■■■■□ 3.01
NDEL1-219ENST00000585098 KIF1AQ12756 1690 aa33.85■■■■□ 3.01
NDEL1-219ENST00000585098 PXDNQ92626 1479 aa33.85■■■■□ 3.01
NDEL1-219ENST00000585098 LRP6O75581 1613 aa33.85■■■■□ 3.01
NDEL1-219ENST00000585098 USP32Q8NFA0 1604 aa33.84■■■■□ 3.01
NDEL1-219ENST00000585098 NUTM2BA6NNL0 878 aaPredicted RBP33.84■■■■□ 3.01
NDEL1-219ENST00000585098 NUTM2EB1AL46 878 aaPredicted RBP33.84■■■■□ 3.01
NDEL1-219ENST00000585098 NUTM2AQ8IVF1 878 aaPredicted RBP33.84■■■■□ 3.01
NDEL1-219ENST00000585098 RGPD8O14715 1765 aaPredicted RBP33.84■■■■□ 3.01
NDEL1-219ENST00000585098 CENPJQ9HC77 1338 aaPredicted RBP33.83■■■■□ 3.01
NDEL1-219ENST00000585098 TULP4Q9NRJ4 1543 aa33.83■■■■□ 3.01
NDEL1-219ENST00000585098 PRR36Q9H6K5 1346 aa33.82■■■■□ 3.01
NDEL1-219ENST00000585098 MEX3CQ5U5Q3 659 aaKnown RBP33.81■■■■□ 3
NDEL1-219ENST00000585098 RGS17Q9UGC6 210 aaPredicted RBP33.81■■■■□ 3
NDEL1-219ENST00000585098 PMFBP1Q8TBY8 1022 aa33.8■■■■□ 3
NDEL1-219ENST00000585098 CDK19Q9BWU1 502 aa33.8■■■■□ 3
NDEL1-219ENST00000585098 KRT28Q7Z3Y7 464 aa33.79■■■■□ 3
NDEL1-219ENST00000585098 GPRASP1Q5JY77 1395 aa33.76■■■■□ 3
NDEL1-219ENST00000585098 NUDT16Q96DE0 195 aaKnown RBP33.75■■■□□ 2.99
NDEL1-219ENST00000585098 CLSPNQ9HAW4 1339 aa33.75■■■□□ 2.99
NDEL1-219ENST00000585098 PSME1Q06323 249 aa33.74■■■□□ 2.99
NDEL1-219ENST00000585098 ATP7BP35670 1465 aa33.72■■■□□ 2.99
NDEL1-219ENST00000585098 RALGAPBQ86X10 1494 aa33.72■■■□□ 2.99
NDEL1-219ENST00000585098 CARD11Q9BXL7 1154 aa33.72■■■□□ 2.99
NDEL1-219ENST00000585098 QRICH2Q9H0J4 1663 aa33.71■■■□□ 2.99
NDEL1-219ENST00000585098 SPATA31A3Q5VYP0 1347 aa33.71■■■□□ 2.99
NDEL1-219ENST00000585098 SRPK2P78362 688 aaKnown RBP33.67■■■□□ 2.98
NDEL1-219ENST00000585098 NGDNQ8NEJ9 315 aaKnown RBP33.67■■■□□ 2.98
NDEL1-219ENST00000585098 COL22A1Q8NFW1 1626 aaPredicted RBP33.67■■■□□ 2.98
NDEL1-219ENST00000585098 ADAMTS2O95450 1211 aa33.66■■■□□ 2.98
NDEL1-219ENST00000585098 SBNO1A3KN83 1393 aa33.65■■■□□ 2.98
NDEL1-219ENST00000585098 POTEAQ6S8J7 498 aa33.65■■■□□ 2.98
NDEL1-219ENST00000585098 CCER1Q8TC90 406 aaPredicted RBP33.65■■■□□ 2.98
NDEL1-219ENST00000585098 CCDC61Q9Y6R9 512 aa33.65■■■□□ 2.98
NDEL1-219ENST00000585098 TNS3Q68CZ2 1445 aa33.64■■■□□ 2.98
NDEL1-219ENST00000585098 CABP2Q9NPB3 220 aa33.64■■■□□ 2.98
NDEL1-219ENST00000585098 ITSN1Q15811 1721 aa33.63■■■□□ 2.97
NDEL1-219ENST00000585098 C8orf37Q96NL8 207 aa33.62■■■□□ 2.97
NDEL1-219ENST00000585098 EVC2Q86UK5 1308 aa33.6■■■□□ 2.97
NDEL1-219ENST00000585098 LMOD2Q6P5Q4 547 aa33.6■■■□□ 2.97
NDEL1-219ENST00000585098 TIMELESSQ9UNS1 1208 aa33.6■■■□□ 2.97
NDEL1-219ENST00000585098 ZNF772Q68DY9 489 aaPredicted RBP33.59■■■□□ 2.97
NDEL1-219ENST00000585098 AFF2P51816 1311 aa33.58■■■□□ 2.97
NDEL1-219ENST00000585098 TOPAZ1Q8N9V7 1692 aa33.58■■■□□ 2.97
NDEL1-219ENST00000585098 PLEKHG3A1L390 1219 aa33.57■■■□□ 2.96
NDEL1-219ENST00000585098 NGLY1Q96IV0 654 aa33.56■■■□□ 2.96
NDEL1-219ENST00000585098 ARHGEF10O15013 1369 aa33.56■■■□□ 2.96
NDEL1-219ENST00000585098 ACEP12821 1306 aa33.55■■■□□ 2.96
NDEL1-219ENST00000585098 PPIP5K1Q6PFW1 1433 aa33.54■■■□□ 2.96
NDEL1-219ENST00000585098 TRPM3Q9HCF6 1732 aaPredicted RBP33.54■■■□□ 2.96
NDEL1-219ENST00000585098 PLEKHG5O94827 1062 aa33.54■■■□□ 2.96
NDEL1-219ENST00000585098 POLR3AO14802 1390 aaPredicted RBP33.54■■■□□ 2.96
NDEL1-219ENST00000585098 PAK3O75914 559 aaPredicted RBP33.52■■■□□ 2.96
NDEL1-219ENST00000585098 SBNO2Q9Y2G9 1366 aa33.51■■■□□ 2.96
NDEL1-219ENST00000585098 CABLES1Q8TDN4 633 aa33.51■■■□□ 2.95
NDEL1-219ENST00000585098 SOCS7O14512 581 aa33.5■■■□□ 2.95
NDEL1-219ENST00000585098 HAP1P54257 671 aaPredicted RBP33.5■■■□□ 2.95
NDEL1-219ENST00000585098 CABP1Q9NZU7 370 aa33.49■■■□□ 2.95
NDEL1-219ENST00000585098 ALS2Q96Q42 1657 aa33.45■■■□□ 2.95
NDEL1-219ENST00000585098 FNBP4Q8N3X1 1017 aaPredicted RBP33.44■■■□□ 2.94
NDEL1-219ENST00000585098 USP21Q9UK80 565 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms