RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 TMEM132EQ6IEE7 984 aa24.41■■□□□ 1.5
CSNK1D-225ENST00000584913 ADGRB2O60241 1585 aa24.39■■□□□ 1.5
CSNK1D-225ENST00000584913 FMN2Q9NZ56 1722 aa24.38■■□□□ 1.49
CSNK1D-225ENST00000584913 STK26Q9P289 416 aa24.38■■□□□ 1.49
CSNK1D-225ENST00000584913 PHF23Q9BUL5 403 aaPredicted RBP24.36■■□□□ 1.49
CSNK1D-225ENST00000584913 PLEKHH1Q9ULM0 1364 aa24.35■■□□□ 1.49
CSNK1D-225ENST00000584913 WAPLQ7Z5K2 1190 aa24.34■■□□□ 1.49
CSNK1D-225ENST00000584913 LRRC59Q96AG4 307 aaKnown RBP24.34■■□□□ 1.49
CSNK1D-225ENST00000584913 KIF1AQ12756 1690 aa24.34■■□□□ 1.49
CSNK1D-225ENST00000584913 TRIM26Q12899 539 aaPredicted RBP24.33■■□□□ 1.49
CSNK1D-225ENST00000584913 ILDR2Q71H61 639 aa24.32■■□□□ 1.48
CSNK1D-225ENST00000584913 SOS2Q07890 1332 aaPredicted RBP24.32■■□□□ 1.48
CSNK1D-225ENST00000584913 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
CSNK1D-225ENST00000584913 ANKARQ7Z5J8 1434 aa24.29■■□□□ 1.48
CSNK1D-225ENST00000584913 NPHP3Q7Z494 1330 aa24.29■■□□□ 1.48
CSNK1D-225ENST00000584913 EIF3AQ14152 1382 aaKnown RBP24.29■■□□□ 1.48
CSNK1D-225ENST00000584913 ARHGEF28Q8N1W1 1705 aaKnown RBP24.28■■□□□ 1.48
CSNK1D-225ENST00000584913 PRAM1Q96QH2 718 aa24.28■■□□□ 1.48
CSNK1D-225ENST00000584913 ORAI2Q96SN7 254 aa24.28■■□□□ 1.48
CSNK1D-225ENST00000584913 LRP6O75581 1613 aa24.27■■□□□ 1.48
CSNK1D-225ENST00000584913 PNPLA6Q8IY17 1366 aa24.27■■□□□ 1.48
CSNK1D-225ENST00000584913 COL22A1Q8NFW1 1626 aaPredicted RBP24.25■■□□□ 1.47
CSNK1D-225ENST00000584913 PXDNQ92626 1479 aa24.25■■□□□ 1.47
CSNK1D-225ENST00000584913 POGKQ9P215 609 aa24.24■■□□□ 1.47
CSNK1D-225ENST00000584913 SOCS7O14512 581 aa24.23■■□□□ 1.47
CSNK1D-225ENST00000584913 ESCO1Q5FWF5 840 aa24.23■■□□□ 1.47
CSNK1D-225ENST00000584913 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
CSNK1D-225ENST00000584913 RGS17Q9UGC6 210 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-225ENST00000584913 TULP4Q9NRJ4 1543 aa24.2■■□□□ 1.47
CSNK1D-225ENST00000584913 USP32Q8NFA0 1604 aa24.18■■□□□ 1.46
CSNK1D-225ENST00000584913 DDX17Q92841 729 aaKnown RBP24.17■■□□□ 1.46
CSNK1D-225ENST00000584913 L3MBTL2Q969R5 705 aa24.17■■□□□ 1.46
CSNK1D-225ENST00000584913 TRPM1Q7Z4N2 1603 aa24.16■■□□□ 1.46
CSNK1D-225ENST00000584913 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
CSNK1D-225ENST00000584913 ZNF772Q68DY9 489 aaPredicted RBP24.14■■□□□ 1.45
CSNK1D-225ENST00000584913 ITSN1Q15811 1721 aa24.13■■□□□ 1.45
CSNK1D-225ENST00000584913 WASLO00401 505 aaPredicted RBP24.13■■□□□ 1.45
CSNK1D-225ENST00000584913 FOXO3O43524 673 aa24.13■■□□□ 1.45
CSNK1D-225ENST00000584913 SAFB2Q14151 953 aaKnown RBP eCLIP24.13■■□□□ 1.45
CSNK1D-225ENST00000584913 PHF8Q9UPP1 1060 aa24.13■■□□□ 1.45
CSNK1D-225ENST00000584913 RGPD8O14715 1765 aaPredicted RBP24.13■■□□□ 1.45
CSNK1D-225ENST00000584913 SIN3AQ96ST3 1273 aa24.12■■□□□ 1.45
CSNK1D-225ENST00000584913 SBNO1A3KN83 1393 aa24.12■■□□□ 1.45
CSNK1D-225ENST00000584913 NUTM2FA1L443 756 aa24.1■■□□□ 1.45
CSNK1D-225ENST00000584913 MINK1Q8N4C8 1332 aaPredicted RBP24.1■■□□□ 1.45
CSNK1D-225ENST00000584913 ATP7BP35670 1465 aa24.09■■□□□ 1.45
CSNK1D-225ENST00000584913 PSME1Q06323 249 aa24.09■■□□□ 1.45
CSNK1D-225ENST00000584913 TNS3Q68CZ2 1445 aa24.09■■□□□ 1.45
CSNK1D-225ENST00000584913 SPATA31A3Q5VYP0 1347 aa24.09■■□□□ 1.45
CSNK1D-225ENST00000584913 NBPF1Q3BBV0 1214 aa24.08■■□□□ 1.45
CSNK1D-225ENST00000584913 GPRASP1Q5JY77 1395 aa24.07■■□□□ 1.44
CSNK1D-225ENST00000584913 POTEAQ6S8J7 498 aa24.07■■□□□ 1.44
CSNK1D-225ENST00000584913 TOPAZ1Q8N9V7 1692 aa24.06■■□□□ 1.44
CSNK1D-225ENST00000584913 ARHGEF10O15013 1369 aa24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 NUTM2BA6NNL0 878 aaPredicted RBP24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 NUTM2EB1AL46 878 aaPredicted RBP24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 NEUROD1Q13562 356 aa24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 KRT28Q7Z3Y7 464 aa24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 NUTM2AQ8IVF1 878 aaPredicted RBP24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 HIRIP3Q9BW71 556 aaPredicted RBP24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 PRR36Q9H6K5 1346 aa24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 CENPJQ9HC77 1338 aaPredicted RBP24.05■■□□□ 1.44
CSNK1D-225ENST00000584913 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
CSNK1D-225ENST00000584913 CDK12Q9NYV4 1490 aaPredicted RBP24.04■■□□□ 1.44
CSNK1D-225ENST00000584913 TRPM3Q9HCF6 1732 aaPredicted RBP24.04■■□□□ 1.44
CSNK1D-225ENST00000584913 TONSLQ96HA7 1378 aa24.03■■□□□ 1.44
CSNK1D-225ENST00000584913 QRICH2Q9H0J4 1663 aa24.03■■□□□ 1.44
CSNK1D-225ENST00000584913 ROCK2O75116 1388 aaKnown RBP24.03■■□□□ 1.44
CSNK1D-225ENST00000584913 AFF2P51816 1311 aa24.01■■□□□ 1.43
CSNK1D-225ENST00000584913 RALGAPBQ86X10 1494 aa24■■□□□ 1.43
CSNK1D-225ENST00000584913 ALS2Q96Q42 1657 aa23.99■■□□□ 1.43
CSNK1D-225ENST00000584913 XPCQ01831 940 aaPredicted RBP23.99■■□□□ 1.43
CSNK1D-225ENST00000584913 CLSPNQ9HAW4 1339 aa23.99■■□□□ 1.43
CSNK1D-225ENST00000584913 POLR3AO14802 1390 aaPredicted RBP23.99■■□□□ 1.43
CSNK1D-225ENST00000584913 FNBP4Q8N3X1 1017 aaPredicted RBP23.98■■□□□ 1.43
CSNK1D-225ENST00000584913 NUDT16Q96DE0 195 aaKnown RBP23.98■■□□□ 1.43
CSNK1D-225ENST00000584913 C8orf37Q96NL8 207 aa23.98■■□□□ 1.43
CSNK1D-225ENST00000584913 SBNO2Q9Y2G9 1366 aa23.98■■□□□ 1.43
CSNK1D-225ENST00000584913 ABCA3Q99758 1704 aa23.97■■□□□ 1.43
CSNK1D-225ENST00000584913 CDK19Q9BWU1 502 aa23.97■■□□□ 1.43
CSNK1D-225ENST00000584913 CCDC61Q9Y6R9 512 aa23.97■■□□□ 1.43
CSNK1D-225ENST00000584913 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.96■■□□□ 1.43
CSNK1D-225ENST00000584913 PMFBP1Q8TBY8 1022 aa23.96■■□□□ 1.43
CSNK1D-225ENST00000584913 BRD4O60885 1362 aaPredicted RBP23.95■■□□□ 1.42
CSNK1D-225ENST00000584913 PLEKHG3A1L390 1219 aa23.94■■□□□ 1.42
CSNK1D-225ENST00000584913 NGLY1Q96IV0 654 aa23.94■■□□□ 1.42
CSNK1D-225ENST00000584913 ADAMTS2O95450 1211 aa23.93■■□□□ 1.42
CSNK1D-225ENST00000584913 RXRBP28702 533 aa23.92■■□□□ 1.42
CSNK1D-225ENST00000584913 NBPF8Q3BBV2 869 aa23.92■■□□□ 1.42
CSNK1D-225ENST00000584913 NGDNQ8NEJ9 315 aaKnown RBP23.92■■□□□ 1.42
CSNK1D-225ENST00000584913 SLIT2O94813 1529 aa23.91■■□□□ 1.42
CSNK1D-225ENST00000584913 EVC2Q86UK5 1308 aa23.9■■□□□ 1.42
CSNK1D-225ENST00000584913 TIMELESSQ9UNS1 1208 aa23.9■■□□□ 1.42
CSNK1D-225ENST00000584913 ATRNO75882 1429 aa23.9■■□□□ 1.42
CSNK1D-225ENST00000584913 CRYBG1Q9Y4K1 1723 aa23.9■■□□□ 1.42
CSNK1D-225ENST00000584913 RBM6P78332 1123 aaKnown RBP23.89■■□□□ 1.41
CSNK1D-225ENST00000584913 TRPC5Q9UL62 973 aaPredicted RBP23.89■■□□□ 1.41
CSNK1D-225ENST00000584913 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
CSNK1D-225ENST00000584913 BCL9LQ86UU0 1499 aa23.88■■□□□ 1.41
CSNK1D-225ENST00000584913 PPIP5K1Q6PFW1 1433 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms