RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 QTRT2Q9H974 415 aaKnown RBP34.35■■■■□ 3.09
TRAPPC8-213ENST00000584876 COL22A1Q8NFW1 1626 aaPredicted RBP34.33■■■■□ 3.09
TRAPPC8-213ENST00000584876 RGS12O14924 1447 aa34.33■■■■□ 3.09
TRAPPC8-213ENST00000584876 NGLY1Q96IV0 654 aa34.33■■■■□ 3.09
TRAPPC8-213ENST00000584876 MPHOSPH9Q99550 1183 aa34.33■■■■□ 3.09
TRAPPC8-213ENST00000584876 ANKRD30BQ9BXX2 1392 aa34.33■■■■□ 3.09
TRAPPC8-213ENST00000584876 KNDC1Q76NI1 1749 aa34.33■■■■□ 3.09
TRAPPC8-213ENST00000584876 RBM6P78332 1123 aaKnown RBP34.32■■■■□ 3.08
TRAPPC8-213ENST00000584876 TECPR2O15040 1411 aa34.31■■■■□ 3.08
TRAPPC8-213ENST00000584876 STK26Q9P289 416 aa34.29■■■■□ 3.08
TRAPPC8-213ENST00000584876 LRPPRCP42704 1394 aaKnown RBP34.28■■■■□ 3.08
TRAPPC8-213ENST00000584876 ESCO1Q5FWF5 840 aa34.28■■■■□ 3.08
TRAPPC8-213ENST00000584876 NPHP3Q7Z494 1330 aa34.28■■■■□ 3.08
TRAPPC8-213ENST00000584876 PIK3C2GO75747 1445 aa34.26■■■■□ 3.07
TRAPPC8-213ENST00000584876 WAPLQ7Z5K2 1190 aa34.25■■■■□ 3.07
TRAPPC8-213ENST00000584876 PXDNQ92626 1479 aa34.25■■■■□ 3.07
TRAPPC8-213ENST00000584876 ABCC11Q96J66 1382 aa34.23■■■■□ 3.07
TRAPPC8-213ENST00000584876 TMEM132EQ6IEE7 984 aa34.22■■■■□ 3.07
TRAPPC8-213ENST00000584876 USP21Q9UK80 565 aa34.22■■■■□ 3.07
TRAPPC8-213ENST00000584876 FMN2Q9NZ56 1722 aa34.21■■■■□ 3.07
TRAPPC8-213ENST00000584876 MARF1Q9Y4F3 1742 aaKnown RBP34.21■■■■□ 3.07
TRAPPC8-213ENST00000584876 MYOM2P54296 1465 aa34.21■■■■□ 3.07
TRAPPC8-213ENST00000584876 PLEKHH1Q9ULM0 1364 aa34.21■■■■□ 3.07
TRAPPC8-213ENST00000584876 NUTM2FA1L443 756 aa34.19■■■■□ 3.06
TRAPPC8-213ENST00000584876 FOXO3O43524 673 aa34.18■■■■□ 3.06
TRAPPC8-213ENST00000584876 XPCQ01831 940 aaPredicted RBP34.18■■■■□ 3.06
TRAPPC8-213ENST00000584876 YTHDC2Q9H6S0 1430 aaKnown RBP34.18■■■■□ 3.06
TRAPPC8-213ENST00000584876 TRPC5Q9UL62 973 aaPredicted RBP34.17■■■■□ 3.06
TRAPPC8-213ENST00000584876 FNBP4Q8N3X1 1017 aaPredicted RBP34.16■■■■□ 3.06
TRAPPC8-213ENST00000584876 KIF1AQ12756 1690 aa34.15■■■■□ 3.06
TRAPPC8-213ENST00000584876 ATRNO75882 1429 aa34.13■■■■□ 3.05
TRAPPC8-213ENST00000584876 ACIN1Q9UKV3 1341 aaKnown RBP34.13■■■■□ 3.05
TRAPPC8-213ENST00000584876 RGPD8O14715 1765 aaPredicted RBP34.1■■■■□ 3.05
TRAPPC8-213ENST00000584876 NRXN1Q9ULB1 1477 aa34.09■■■■□ 3.05
TRAPPC8-213ENST00000584876 ATAD2Q6PL18 1390 aa34.08■■■■□ 3.05
TRAPPC8-213ENST00000584876 C14orf93Q9H972 538 aaKnown RBP34.07■■■■□ 3.04
TRAPPC8-213ENST00000584876 SIRT1Q96EB6 747 aa34.05■■■■□ 3.04
TRAPPC8-213ENST00000584876 BCL9LQ86UU0 1499 aa34.05■■■■□ 3.04
TRAPPC8-213ENST00000584876 DHX57Q6P158 1386 aaKnown RBP34.04■■■■□ 3.04
TRAPPC8-213ENST00000584876 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.04■■■■□ 3.04
TRAPPC8-213ENST00000584876 CFAP70Q5T0N1 1121 aa34.03■■■■□ 3.04
TRAPPC8-213ENST00000584876 SPATA31A3Q5VYP0 1347 aa34.02■■■■□ 3.04
TRAPPC8-213ENST00000584876 RAB3GAP2Q9H2M9 1393 aa33.98■■■■□ 3.03
TRAPPC8-213ENST00000584876 KRT28Q7Z3Y7 464 aa33.98■■■■□ 3.03
TRAPPC8-213ENST00000584876 USP32Q8NFA0 1604 aa33.97■■■■□ 3.03
TRAPPC8-213ENST00000584876 PHF8Q9UPP1 1060 aa33.96■■■■□ 3.03
TRAPPC8-213ENST00000584876 DLC1Q96QB1 1528 aa33.95■■■■□ 3.03
TRAPPC8-213ENST00000584876 SAFB2Q14151 953 aaKnown RBP eCLIP33.95■■■■□ 3.03
TRAPPC8-213ENST00000584876 PRAM1Q96QH2 718 aa33.95■■■■□ 3.03
TRAPPC8-213ENST00000584876 TNS3Q68CZ2 1445 aa33.95■■■■□ 3.02
TRAPPC8-213ENST00000584876 SLIT2O94813 1529 aa33.94■■■■□ 3.02
TRAPPC8-213ENST00000584876 GJD4Q96KN9 370 aaPredicted RBP33.93■■■■□ 3.02
TRAPPC8-213ENST00000584876 EP400Q96L91 3159 aa33.91■■■■□ 3.02
TRAPPC8-213ENST00000584876 PSME1Q06323 249 aa33.9■■■■□ 3.02
TRAPPC8-213ENST00000584876 UNC5CLQ8IV45 518 aa33.9■■■■□ 3.02
TRAPPC8-213ENST00000584876 ABCA3Q99758 1704 aa33.9■■■■□ 3.02
TRAPPC8-213ENST00000584876 ADGRB2O60241 1585 aa33.89■■■■□ 3.02
TRAPPC8-213ENST00000584876 GLI3P10071 1580 aa33.89■■■■□ 3.02
TRAPPC8-213ENST00000584876 POGKQ9P215 609 aa33.89■■■■□ 3.02
TRAPPC8-213ENST00000584876 ADGRB1O14514 1584 aa33.89■■■■□ 3.02
TRAPPC8-213ENST00000584876 HAP1P54257 671 aaPredicted RBP33.88■■■■□ 3.01
TRAPPC8-213ENST00000584876 RALGAPBQ86X10 1494 aa33.88■■■■□ 3.01
TRAPPC8-213ENST00000584876 SBNO1A3KN83 1393 aa33.86■■■■□ 3.01
TRAPPC8-213ENST00000584876 PLCH1Q4KWH8 1693 aa33.86■■■■□ 3.01
TRAPPC8-213ENST00000584876 ANKARQ7Z5J8 1434 aa33.86■■■■□ 3.01
TRAPPC8-213ENST00000584876 NWD2Q9ULI1 1742 aa33.83■■■■□ 3.01
TRAPPC8-213ENST00000584876 BRWD3Q6RI45 1802 aa33.82■■■■□ 3
TRAPPC8-213ENST00000584876 PLEKHG5O94827 1062 aa33.82■■■■□ 3
TRAPPC8-213ENST00000584876 LMOD2Q6P5Q4 547 aa33.82■■■■□ 3
TRAPPC8-213ENST00000584876 CABLES1Q8TDN4 633 aa33.82■■■■□ 3
TRAPPC8-213ENST00000584876 ARHGEF10O15013 1369 aa33.82■■■■□ 3
TRAPPC8-213ENST00000584876 PMFBP1Q8TBY8 1022 aa33.8■■■■□ 3
TRAPPC8-213ENST00000584876 TRAK1Q9UPV9 953 aa33.8■■■■□ 3
TRAPPC8-213ENST00000584876 TRPM3Q9HCF6 1732 aaPredicted RBP33.79■■■■□ 3
TRAPPC8-213ENST00000584876 CCDC125Q86Z20 511 aa33.78■■■■□ 3
TRAPPC8-213ENST00000584876 KDM2AQ9Y2K7 1162 aa33.78■■■■□ 3
TRAPPC8-213ENST00000584876 HIRIP3Q9BW71 556 aaPredicted RBP33.77■■■■□ 3
TRAPPC8-213ENST00000584876 DCAF11Q8TEB1 546 aa33.75■■■□□ 2.99
TRAPPC8-213ENST00000584876 MINK1Q8N4C8 1332 aaPredicted RBP33.75■■■□□ 2.99
TRAPPC8-213ENST00000584876 EIF3AQ14152 1382 aaKnown RBP33.74■■■□□ 2.99
TRAPPC8-213ENST00000584876 TULP4Q9NRJ4 1543 aa33.74■■■□□ 2.99
TRAPPC8-213ENST00000584876 ALS2Q96Q42 1657 aa33.73■■■□□ 2.99
TRAPPC8-213ENST00000584876 VPS72Q15906 364 aa33.72■■■□□ 2.99
TRAPPC8-213ENST00000584876 ZRANB1Q9UGI0 708 aa33.71■■■□□ 2.99
TRAPPC8-213ENST00000584876 PRR36Q9H6K5 1346 aa33.7■■■□□ 2.99
TRAPPC8-213ENST00000584876 ARHGEF28Q8N1W1 1705 aaKnown RBP33.7■■■□□ 2.98
TRAPPC8-213ENST00000584876 CCDC9Q9Y3X0 531 aaKnown RBP33.69■■■□□ 2.98
TRAPPC8-213ENST00000584876 GPRASP1Q5JY77 1395 aa33.69■■■□□ 2.98
TRAPPC8-213ENST00000584876 NRAPQ86VF7 1730 aa33.68■■■□□ 2.98
TRAPPC8-213ENST00000584876 SEPT12Q8IYM1 358 aa33.68■■■□□ 2.98
TRAPPC8-213ENST00000584876 STAC3Q96MF2 364 aa33.68■■■□□ 2.98
TRAPPC8-213ENST00000584876 BLMP54132 1417 aaPredicted RBP33.68■■■□□ 2.98
TRAPPC8-213ENST00000584876 WASLO00401 505 aaPredicted RBP33.66■■■□□ 2.98
TRAPPC8-213ENST00000584876 ITSN1Q15811 1721 aa33.65■■■□□ 2.98
TRAPPC8-213ENST00000584876 FAM83GA6ND36 823 aa33.65■■■□□ 2.98
TRAPPC8-213ENST00000584876 SRCAPQ6ZRS2 3230 aa33.64■■■□□ 2.98
TRAPPC8-213ENST00000584876 COL14A1Q05707 1796 aaKnown RBP33.64■■■□□ 2.98
TRAPPC8-213ENST00000584876 CRYBG1Q9Y4K1 1723 aa33.62■■■□□ 2.97
TRAPPC8-213ENST00000584876 HRCP23327 699 aa33.62■■■□□ 2.97
TRAPPC8-213ENST00000584876 ONECUT3O60422 494 aaPredicted RBP33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms