RNA–Protein interactions for RNA: ENST00000584866.1

NDEL1-218, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-218ENST00000584866 ADGRB1O14514 1584 aa28.62■■■□□ 2.17
NDEL1-218ENST00000584866 CDC42BPGQ6DT37 1551 aa28.62■■■□□ 2.17
NDEL1-218ENST00000584866 NHSL1Q5SYE7 1610 aa28.62■■■□□ 2.17
NDEL1-218ENST00000584866 PHF23Q9BUL5 403 aaPredicted RBP28.62■■■□□ 2.17
NDEL1-218ENST00000584866 TRIM26Q12899 539 aaPredicted RBP28.61■■■□□ 2.17
NDEL1-218ENST00000584866 DDX17Q92841 729 aaKnown RBP28.61■■■□□ 2.17
NDEL1-218ENST00000584866 DLC1Q96QB1 1528 aa28.58■■■□□ 2.17
NDEL1-218ENST00000584866 PRAM1Q96QH2 718 aa28.57■■■□□ 2.16
NDEL1-218ENST00000584866 RGS17Q9UGC6 210 aaPredicted RBP28.57■■■□□ 2.16
NDEL1-218ENST00000584866 SPATA31A6Q5VVP1 1343 aa28.55■■■□□ 2.16
NDEL1-218ENST00000584866 LRRC59Q96AG4 307 aaKnown RBP28.55■■■□□ 2.16
NDEL1-218ENST00000584866 SIN3AQ96ST3 1273 aa28.55■■■□□ 2.16
NDEL1-218ENST00000584866 TRAK1Q9UPV9 953 aa28.55■■■□□ 2.16
NDEL1-218ENST00000584866 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
NDEL1-218ENST00000584866 ESCO1Q5FWF5 840 aa28.53■■■□□ 2.16
NDEL1-218ENST00000584866 SOS2Q07890 1332 aaPredicted RBP28.52■■■□□ 2.16
NDEL1-218ENST00000584866 NUTM2FA1L443 756 aa28.52■■■□□ 2.16
NDEL1-218ENST00000584866 SAFB2Q14151 953 aaKnown RBP eCLIP28.52■■■□□ 2.16
NDEL1-218ENST00000584866 POGKQ9P215 609 aa28.52■■■□□ 2.16
NDEL1-218ENST00000584866 FMN2Q9NZ56 1722 aa28.49■■■□□ 2.15
NDEL1-218ENST00000584866 L3MBTL2Q969R5 705 aa28.49■■■□□ 2.15
NDEL1-218ENST00000584866 LRP6O75581 1613 aa28.49■■■□□ 2.15
NDEL1-218ENST00000584866 SOCS7O14512 581 aa28.46■■■□□ 2.15
NDEL1-218ENST00000584866 NEUROD1Q13562 356 aa28.45■■■□□ 2.14
NDEL1-218ENST00000584866 PNPLA6Q8IY17 1366 aa28.45■■■□□ 2.14
NDEL1-218ENST00000584866 NPHP3Q7Z494 1330 aa28.44■■■□□ 2.14
NDEL1-218ENST00000584866 KIAA1210Q9ULL0 1709 aa28.44■■■□□ 2.14
NDEL1-218ENST00000584866 FOXO3O43524 673 aa28.43■■■□□ 2.14
NDEL1-218ENST00000584866 NBPF1Q3BBV0 1214 aa28.43■■■□□ 2.14
NDEL1-218ENST00000584866 NUTM2BA6NNL0 878 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-218ENST00000584866 NUTM2EB1AL46 878 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-218ENST00000584866 NUTM2AQ8IVF1 878 aaPredicted RBP28.41■■■□□ 2.14
NDEL1-218ENST00000584866 ADGRB2O60241 1585 aa28.41■■■□□ 2.14
NDEL1-218ENST00000584866 POTEAQ6S8J7 498 aa28.4■■■□□ 2.14
NDEL1-218ENST00000584866 HIRIP3Q9BW71 556 aaPredicted RBP28.4■■■□□ 2.14
NDEL1-218ENST00000584866 MINK1Q8N4C8 1332 aaPredicted RBP28.4■■■□□ 2.14
NDEL1-218ENST00000584866 PXDNQ92626 1479 aa28.4■■■□□ 2.14
NDEL1-218ENST00000584866 ARHGEF28Q8N1W1 1705 aaKnown RBP28.38■■■□□ 2.13
NDEL1-218ENST00000584866 MEX3CQ5U5Q3 659 aaKnown RBP28.38■■■□□ 2.13
NDEL1-218ENST00000584866 RGPD8O14715 1765 aaPredicted RBP28.37■■■□□ 2.13
NDEL1-218ENST00000584866 XPCQ01831 940 aaPredicted RBP28.37■■■□□ 2.13
NDEL1-218ENST00000584866 PHF8Q9UPP1 1060 aa28.37■■■□□ 2.13
NDEL1-218ENST00000584866 WASLO00401 505 aaPredicted RBP28.35■■■□□ 2.13
NDEL1-218ENST00000584866 KIF1AQ12756 1690 aa28.35■■■□□ 2.13
NDEL1-218ENST00000584866 ANKARQ7Z5J8 1434 aa28.35■■■□□ 2.13
NDEL1-218ENST00000584866 USP32Q8NFA0 1604 aa28.34■■■□□ 2.13
NDEL1-218ENST00000584866 KRT28Q7Z3Y7 464 aa28.32■■■□□ 2.12
NDEL1-218ENST00000584866 PRR36Q9H6K5 1346 aa28.32■■■□□ 2.12
NDEL1-218ENST00000584866 EIF3AQ14152 1382 aaKnown RBP28.29■■■□□ 2.12
NDEL1-218ENST00000584866 SPATA31A3Q5VYP0 1347 aa28.28■■■□□ 2.12
NDEL1-218ENST00000584866 ZNF772Q68DY9 489 aaPredicted RBP28.28■■■□□ 2.12
NDEL1-218ENST00000584866 PMFBP1Q8TBY8 1022 aa28.28■■■□□ 2.12
NDEL1-218ENST00000584866 COL22A1Q8NFW1 1626 aaPredicted RBP28.28■■■□□ 2.12
NDEL1-218ENST00000584866 TULP4Q9NRJ4 1543 aa28.28■■■□□ 2.12
NDEL1-218ENST00000584866 ADAMTS2O95450 1211 aa28.25■■■□□ 2.11
NDEL1-218ENST00000584866 NBPF8Q3BBV2 869 aa28.25■■■□□ 2.11
NDEL1-218ENST00000584866 TRPM1Q7Z4N2 1603 aa28.25■■■□□ 2.11
NDEL1-218ENST00000584866 AFF2P51816 1311 aa28.24■■■□□ 2.11
NDEL1-218ENST00000584866 PSME1Q06323 249 aa28.24■■■□□ 2.11
NDEL1-218ENST00000584866 CDK19Q9BWU1 502 aa28.24■■■□□ 2.11
NDEL1-218ENST00000584866 C8orf37Q96NL8 207 aa28.23■■■□□ 2.11
NDEL1-218ENST00000584866 NUDT16Q96DE0 195 aaKnown RBP28.22■■■□□ 2.11
NDEL1-218ENST00000584866 CENPJQ9HC77 1338 aaPredicted RBP28.21■■■□□ 2.11
NDEL1-218ENST00000584866 SBNO1A3KN83 1393 aa28.21■■■□□ 2.11
NDEL1-218ENST00000584866 ATP7BP35670 1465 aa28.2■■■□□ 2.1
NDEL1-218ENST00000584866 TNS3Q68CZ2 1445 aa28.18■■■□□ 2.1
NDEL1-218ENST00000584866 NGLY1Q96IV0 654 aa28.18■■■□□ 2.1
NDEL1-218ENST00000584866 ROCK2O75116 1388 aaKnown RBP28.18■■■□□ 2.1
NDEL1-218ENST00000584866 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
NDEL1-218ENST00000584866 NGDNQ8NEJ9 315 aaKnown RBP28.15■■■□□ 2.1
NDEL1-218ENST00000584866 GPRASP1Q5JY77 1395 aa28.14■■■□□ 2.1
NDEL1-218ENST00000584866 FNBP4Q8N3X1 1017 aaPredicted RBP28.14■■■□□ 2.1
NDEL1-218ENST00000584866 CCDC61Q9Y6R9 512 aa28.13■■■□□ 2.09
NDEL1-218ENST00000584866 QTRT2Q9H974 415 aaKnown RBP28.12■■■□□ 2.09
NDEL1-218ENST00000584866 RXRBP28702 533 aa28.11■■■□□ 2.09
NDEL1-218ENST00000584866 ITSN1Q15811 1721 aa28.11■■■□□ 2.09
NDEL1-218ENST00000584866 TRPM3Q9HCF6 1732 aaPredicted RBP28.11■■■□□ 2.09
NDEL1-218ENST00000584866 ARHGEF10O15013 1369 aa28.11■■■□□ 2.09
NDEL1-218ENST00000584866 QRICH2Q9H0J4 1663 aa28.1■■■□□ 2.09
NDEL1-218ENST00000584866 PLEKHG3A1L390 1219 aa28.1■■■□□ 2.09
NDEL1-218ENST00000584866 LMOD2Q6P5Q4 547 aa28.1■■■□□ 2.09
NDEL1-218ENST00000584866 CABLES1Q8TDN4 633 aa28.09■■■□□ 2.09
NDEL1-218ENST00000584866 USP21Q9UK80 565 aa28.09■■■□□ 2.09
NDEL1-218ENST00000584866 SRPK2P78362 688 aaKnown RBP28.08■■■□□ 2.09
NDEL1-218ENST00000584866 PCGF6Q9BYE7 350 aa28.08■■■□□ 2.09
NDEL1-218ENST00000584866 CABP2Q9NPB3 220 aa28.08■■■□□ 2.09
NDEL1-218ENST00000584866 MARF1Q9Y4F3 1742 aaKnown RBP28.08■■■□□ 2.09
NDEL1-218ENST00000584866 TOPAZ1Q8N9V7 1692 aa28.07■■■□□ 2.08
NDEL1-218ENST00000584866 ACEP12821 1306 aa28.06■■■□□ 2.08
NDEL1-218ENST00000584866 POLR3AO14802 1390 aaPredicted RBP28.06■■■□□ 2.08
NDEL1-218ENST00000584866 ALS2Q96Q42 1657 aa28.05■■■□□ 2.08
NDEL1-218ENST00000584866 RALGAPBQ86X10 1494 aa28.04■■■□□ 2.08
NDEL1-218ENST00000584866 RBM6P78332 1123 aaKnown RBP28.04■■■□□ 2.08
NDEL1-218ENST00000584866 CARD11Q9BXL7 1154 aa28.04■■■□□ 2.08
NDEL1-218ENST00000584866 PLEKHG5O94827 1062 aa28.03■■■□□ 2.08
NDEL1-218ENST00000584866 BCL9LQ86UU0 1499 aa28.02■■■□□ 2.08
NDEL1-218ENST00000584866 PAK3O75914 559 aaPredicted RBP28.02■■■□□ 2.08
NDEL1-218ENST00000584866 TRPC5Q9UL62 973 aaPredicted RBP28.02■■■□□ 2.08
NDEL1-218ENST00000584866 CDK12Q9NYV4 1490 aaPredicted RBP28.02■■■□□ 2.08
NDEL1-218ENST00000584866 EVC2Q86UK5 1308 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms