RNA–Protein interactions for RNA: ENST00000584842.1

CTC1-213, Transcript of CST telomere replication complex component 1, humanhuman

TSL 3

Gene CTC1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-213ENST00000584842 DISP3Q9P2K9 1392 aa11.51□□□□□ -0.57
CTC1-213ENST00000584842 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
CTC1-213ENST00000584842 POGKQ9P215 609 aa11.5□□□□□ -0.57
CTC1-213ENST00000584842 C1orf167Q5SNV9 1468 aa11.5□□□□□ -0.57
CTC1-213ENST00000584842 ADGRB2O60241 1585 aa11.5□□□□□ -0.57
CTC1-213ENST00000584842 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
CTC1-213ENST00000584842 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
CTC1-213ENST00000584842 BRINP3Q76B58 766 aa11.49□□□□□ -0.57
CTC1-213ENST00000584842 WAPLQ7Z5K2 1190 aa11.49□□□□□ -0.57
CTC1-213ENST00000584842 PRAM1Q96QH2 718 aa11.48□□□□□ -0.57
CTC1-213ENST00000584842 SIN3AQ96ST3 1273 aa11.48□□□□□ -0.57
CTC1-213ENST00000584842 EIF3AQ14152 1382 aaKnown RBP11.48□□□□□ -0.57
CTC1-213ENST00000584842 TONSLQ96HA7 1378 aa11.48□□□□□ -0.57
CTC1-213ENST00000584842 JCADQ9P266 1359 aa11.48□□□□□ -0.57
CTC1-213ENST00000584842 PLEKHH1Q9ULM0 1364 aa11.48□□□□□ -0.57
CTC1-213ENST00000584842 TRPM1Q7Z4N2 1603 aa11.48□□□□□ -0.57
CTC1-213ENST00000584842 PHF23Q9BUL5 403 aaPredicted RBP11.47□□□□□ -0.57
CTC1-213ENST00000584842 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
CTC1-213ENST00000584842 RGPD8O14715 1765 aaPredicted RBP11.46□□□□□ -0.57
CTC1-213ENST00000584842 SAFB2Q14151 953 aaKnown RBP eCLIP11.46□□□□□ -0.57
CTC1-213ENST00000584842 L3MBTL2Q969R5 705 aa11.46□□□□□ -0.57
CTC1-213ENST00000584842 ITSN1Q15811 1721 aa11.46□□□□□ -0.58
CTC1-213ENST00000584842 QRICH2Q9H0J4 1663 aa11.44□□□□□ -0.58
CTC1-213ENST00000584842 ESCO1Q5FWF5 840 aa11.44□□□□□ -0.58
CTC1-213ENST00000584842 PCGF6Q9BYE7 350 aa11.44□□□□□ -0.58
CTC1-213ENST00000584842 ANKARQ7Z5J8 1434 aa11.43□□□□□ -0.58
CTC1-213ENST00000584842 SPATA31A6Q5VVP1 1343 aa11.43□□□□□ -0.58
CTC1-213ENST00000584842 NPHP3Q7Z494 1330 aa11.43□□□□□ -0.58
CTC1-213ENST00000584842 ROCK2O75116 1388 aaKnown RBP11.42□□□□□ -0.58
CTC1-213ENST00000584842 MINK1Q8N4C8 1332 aaPredicted RBP11.42□□□□□ -0.58
CTC1-213ENST00000584842 TULP4Q9NRJ4 1543 aa11.42□□□□□ -0.58
CTC1-213ENST00000584842 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
CTC1-213ENST00000584842 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
CTC1-213ENST00000584842 LRRC59Q96AG4 307 aaKnown RBP11.42□□□□□ -0.58
CTC1-213ENST00000584842 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
CTC1-213ENST00000584842 USP32Q8NFA0 1604 aa11.41□□□□□ -0.58
CTC1-213ENST00000584842 MEX3CQ5U5Q3 659 aaKnown RBP11.4□□□□□ -0.58
CTC1-213ENST00000584842 HIRIP3Q9BW71 556 aaPredicted RBP11.4□□□□□ -0.58
CTC1-213ENST00000584842 CLSPNQ9HAW4 1339 aa11.39□□□□□ -0.59
CTC1-213ENST00000584842 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
CTC1-213ENST00000584842 NBPF1Q3BBV0 1214 aa11.39□□□□□ -0.59
CTC1-213ENST00000584842 COL22A1Q8NFW1 1626 aaPredicted RBP11.38□□□□□ -0.59
CTC1-213ENST00000584842 RALGAPBQ86X10 1494 aa11.38□□□□□ -0.59
CTC1-213ENST00000584842 PXDNQ92626 1479 aa11.38□□□□□ -0.59
CTC1-213ENST00000584842 SOS2Q07890 1332 aaPredicted RBP11.38□□□□□ -0.59
CTC1-213ENST00000584842 WASLO00401 505 aaPredicted RBP11.38□□□□□ -0.59
CTC1-213ENST00000584842 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
CTC1-213ENST00000584842 PHF8Q9UPP1 1060 aa11.38□□□□□ -0.59
CTC1-213ENST00000584842 PNPLA6Q8IY17 1366 aa11.38□□□□□ -0.59
CTC1-213ENST00000584842 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
CTC1-213ENST00000584842 FOXO3O43524 673 aa11.37□□□□□ -0.59
CTC1-213ENST00000584842 LRP6O75581 1613 aa11.36□□□□□ -0.59
CTC1-213ENST00000584842 MARF1Q9Y4F3 1742 aaKnown RBP11.36□□□□□ -0.59
CTC1-213ENST00000584842 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
CTC1-213ENST00000584842 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
CTC1-213ENST00000584842 PSME1Q06323 249 aa11.36□□□□□ -0.59
CTC1-213ENST00000584842 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
CTC1-213ENST00000584842 GPRASP1Q5JY77 1395 aa11.36□□□□□ -0.59
CTC1-213ENST00000584842 ATP7BP35670 1465 aa11.36□□□□□ -0.59
CTC1-213ENST00000584842 CARD11Q9BXL7 1154 aa11.35□□□□□ -0.59
CTC1-213ENST00000584842 SRPK2P78362 688 aaKnown RBP11.34□□□□□ -0.59
CTC1-213ENST00000584842 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
CTC1-213ENST00000584842 CCER1Q8TC90 406 aaPredicted RBP11.34□□□□□ -0.59
CTC1-213ENST00000584842 TRPM3Q9HCF6 1732 aaPredicted RBP11.34□□□□□ -0.59
CTC1-213ENST00000584842 TNS3Q68CZ2 1445 aa11.34□□□□□ -0.59
CTC1-213ENST00000584842 SBNO1A3KN83 1393 aa11.33□□□□□ -0.6
CTC1-213ENST00000584842 ARHGEF10O15013 1369 aa11.33□□□□□ -0.6
CTC1-213ENST00000584842 NBPF8Q3BBV2 869 aa11.33□□□□□ -0.6
CTC1-213ENST00000584842 KRT28Q7Z3Y7 464 aa11.33□□□□□ -0.6
CTC1-213ENST00000584842 NGDNQ8NEJ9 315 aaKnown RBP11.33□□□□□ -0.6
CTC1-213ENST00000584842 CDK19Q9BWU1 502 aa11.33□□□□□ -0.6
CTC1-213ENST00000584842 EVC2Q86UK5 1308 aa11.33□□□□□ -0.6
CTC1-213ENST00000584842 PRR36Q9H6K5 1346 aa11.33□□□□□ -0.6
CTC1-213ENST00000584842 ABCA3Q99758 1704 aa11.32□□□□□ -0.6
CTC1-213ENST00000584842 PMFBP1Q8TBY8 1022 aa11.32□□□□□ -0.6
CTC1-213ENST00000584842 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
CTC1-213ENST00000584842 TIMELESSQ9UNS1 1208 aa11.32□□□□□ -0.6
CTC1-213ENST00000584842 SPATA31A3Q5VYP0 1347 aa11.32□□□□□ -0.6
CTC1-213ENST00000584842 ALS2Q96Q42 1657 aa11.31□□□□□ -0.6
CTC1-213ENST00000584842 HAP1P54257 671 aaPredicted RBP11.31□□□□□ -0.6
CTC1-213ENST00000584842 ZNF772Q68DY9 489 aaPredicted RBP11.31□□□□□ -0.6
CTC1-213ENST00000584842 PPIP5K1Q6PFW1 1433 aa11.3□□□□□ -0.6
CTC1-213ENST00000584842 LMOD2Q6P5Q4 547 aa11.3□□□□□ -0.6
CTC1-213ENST00000584842 CCDC61Q9Y6R9 512 aa11.3□□□□□ -0.6
CTC1-213ENST00000584842 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
CTC1-213ENST00000584842 ADAMTS2O95450 1211 aa11.29□□□□□ -0.6
CTC1-213ENST00000584842 C8orf37Q96NL8 207 aa11.29□□□□□ -0.6
CTC1-213ENST00000584842 PAK3O75914 559 aaPredicted RBP11.28□□□□□ -0.6
CTC1-213ENST00000584842 ILDR2Q71H61 639 aa11.28□□□□□ -0.6
CTC1-213ENST00000584842 CABP2Q9NPB3 220 aa11.28□□□□□ -0.6
CTC1-213ENST00000584842 AFF2P51816 1311 aa11.28□□□□□ -0.6
CTC1-213ENST00000584842 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
CTC1-213ENST00000584842 ATAD2Q6PL18 1390 aa11.28□□□□□ -0.6
CTC1-213ENST00000584842 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
CTC1-213ENST00000584842 NGLY1Q96IV0 654 aa11.27□□□□□ -0.61
CTC1-213ENST00000584842 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.26□□□□□ -0.61
CTC1-213ENST00000584842 PLEKHG3A1L390 1219 aa11.26□□□□□ -0.61
CTC1-213ENST00000584842 RGS17Q9UGC6 210 aaPredicted RBP11.26□□□□□ -0.61
CTC1-213ENST00000584842 ACEP12821 1306 aa11.26□□□□□ -0.61
CTC1-213ENST00000584842 PLCH1Q4KWH8 1693 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms