RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 CDC42BPGQ6DT37 1551 aa24.86■■□□□ 1.57
CCDC57-219ENST00000584717 RGL3Q3MIN7 710 aa24.84■■□□□ 1.57
CCDC57-219ENST00000584717 IFT172Q9UG01 1749 aa24.83■■□□□ 1.57
CCDC57-219ENST00000584717 STK26Q9P289 416 aa24.83■■□□□ 1.57
CCDC57-219ENST00000584717 ESCO1Q5FWF5 840 aa24.82■■□□□ 1.56
CCDC57-219ENST00000584717 SPATA31E1Q6ZUB1 1445 aa24.82■■□□□ 1.56
CCDC57-219ENST00000584717 COL22A1Q8NFW1 1626 aaPredicted RBP24.82■■□□□ 1.56
CCDC57-219ENST00000584717 WAPLQ7Z5K2 1190 aa24.8■■□□□ 1.56
CCDC57-219ENST00000584717 USP21Q9UK80 565 aa24.8■■□□□ 1.56
CCDC57-219ENST00000584717 NPHP3Q7Z494 1330 aa24.79■■□□□ 1.56
CCDC57-219ENST00000584717 PXDNQ92626 1479 aa24.78■■□□□ 1.56
CCDC57-219ENST00000584717 NUTM2FA1L443 756 aa24.78■■□□□ 1.56
CCDC57-219ENST00000584717 XPCQ01831 940 aaPredicted RBP24.78■■□□□ 1.56
CCDC57-219ENST00000584717 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
CCDC57-219ENST00000584717 LRPPRCP42704 1394 aaKnown RBP24.78■■□□□ 1.56
CCDC57-219ENST00000584717 ANKRD30BQ9BXX2 1392 aa24.78■■□□□ 1.56
CCDC57-219ENST00000584717 TECPR2O15040 1411 aa24.78■■□□□ 1.56
CCDC57-219ENST00000584717 KNDC1Q76NI1 1749 aa24.77■■□□□ 1.56
CCDC57-219ENST00000584717 MYOM2P54296 1465 aa24.77■■□□□ 1.56
CCDC57-219ENST00000584717 FOXO3O43524 673 aa24.76■■□□□ 1.55
CCDC57-219ENST00000584717 TMEM132EQ6IEE7 984 aa24.76■■□□□ 1.55
CCDC57-219ENST00000584717 PLEKHH1Q9ULM0 1364 aa24.76■■□□□ 1.55
CCDC57-219ENST00000584717 FNBP4Q8N3X1 1017 aaPredicted RBP24.74■■□□□ 1.55
CCDC57-219ENST00000584717 TRPC5Q9UL62 973 aaPredicted RBP24.74■■□□□ 1.55
CCDC57-219ENST00000584717 PIK3C2GO75747 1445 aa24.74■■□□□ 1.55
CCDC57-219ENST00000584717 ABCC11Q96J66 1382 aa24.73■■□□□ 1.55
CCDC57-219ENST00000584717 ATRNO75882 1429 aa24.72■■□□□ 1.55
CCDC57-219ENST00000584717 FMN2Q9NZ56 1722 aa24.72■■□□□ 1.55
CCDC57-219ENST00000584717 MARF1Q9Y4F3 1742 aaKnown RBP24.72■■□□□ 1.55
CCDC57-219ENST00000584717 YTHDC2Q9H6S0 1430 aaKnown RBP24.7■■□□□ 1.55
CCDC57-219ENST00000584717 ATAD2Q6PL18 1390 aa24.69■■□□□ 1.54
CCDC57-219ENST00000584717 KIF1AQ12756 1690 aa24.66■■□□□ 1.54
CCDC57-219ENST00000584717 BCL9LQ86UU0 1499 aa24.66■■□□□ 1.54
CCDC57-219ENST00000584717 EP400Q96L91 3159 aa24.65■■□□□ 1.54
CCDC57-219ENST00000584717 RGPD8O14715 1765 aaPredicted RBP24.62■■□□□ 1.53
CCDC57-219ENST00000584717 SPATA31A3Q5VYP0 1347 aa24.61■■□□□ 1.53
CCDC57-219ENST00000584717 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
CCDC57-219ENST00000584717 NRXN1Q9ULB1 1477 aa24.61■■□□□ 1.53
CCDC57-219ENST00000584717 CFAP70Q5T0N1 1121 aa24.6■■□□□ 1.53
CCDC57-219ENST00000584717 KRT28Q7Z3Y7 464 aa24.6■■□□□ 1.53
CCDC57-219ENST00000584717 SRCAPQ6ZRS2 3230 aa24.6■■□□□ 1.53
CCDC57-219ENST00000584717 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.6■■□□□ 1.53
CCDC57-219ENST00000584717 DHX57Q6P158 1386 aaKnown RBP24.58■■□□□ 1.53
CCDC57-219ENST00000584717 SAFB2Q14151 953 aaKnown RBP eCLIP24.58■■□□□ 1.53
CCDC57-219ENST00000584717 SIRT1Q96EB6 747 aa24.58■■□□□ 1.53
CCDC57-219ENST00000584717 GJD4Q96KN9 370 aaPredicted RBP24.58■■□□□ 1.53
CCDC57-219ENST00000584717 USP32Q8NFA0 1604 aa24.57■■□□□ 1.52
CCDC57-219ENST00000584717 PHF8Q9UPP1 1060 aa24.56■■□□□ 1.52
CCDC57-219ENST00000584717 SLIT2O94813 1529 aa24.56■■□□□ 1.52
CCDC57-219ENST00000584717 TNS3Q68CZ2 1445 aa24.55■■□□□ 1.52
CCDC57-219ENST00000584717 PLEKHG5O94827 1062 aa24.55■■□□□ 1.52
CCDC57-219ENST00000584717 PRAM1Q96QH2 718 aa24.55■■□□□ 1.52
CCDC57-219ENST00000584717 GLI3P10071 1580 aa24.54■■□□□ 1.52
CCDC57-219ENST00000584717 UNC5CLQ8IV45 518 aa24.54■■□□□ 1.52
CCDC57-219ENST00000584717 ACIN1Q9UKV3 1341 aaKnown RBP24.54■■□□□ 1.52
CCDC57-219ENST00000584717 RALGAPBQ86X10 1494 aa24.53■■□□□ 1.52
CCDC57-219ENST00000584717 HAP1P54257 671 aaPredicted RBP24.52■■□□□ 1.52
CCDC57-219ENST00000584717 CABLES1Q8TDN4 633 aa24.52■■□□□ 1.52
CCDC57-219ENST00000584717 RAB3GAP2Q9H2M9 1393 aa24.52■■□□□ 1.52
CCDC57-219ENST00000584717 PSME1Q06323 249 aa24.51■■□□□ 1.51
CCDC57-219ENST00000584717 ABCA3Q99758 1704 aa24.5■■□□□ 1.51
CCDC57-219ENST00000584717 POGKQ9P215 609 aa24.5■■□□□ 1.51
CCDC57-219ENST00000584717 DLC1Q96QB1 1528 aa24.5■■□□□ 1.51
CCDC57-219ENST00000584717 LMOD2Q6P5Q4 547 aa24.49■■□□□ 1.51
CCDC57-219ENST00000584717 PLCH1Q4KWH8 1693 aa24.49■■□□□ 1.51
CCDC57-219ENST00000584717 SBNO1A3KN83 1393 aa24.48■■□□□ 1.51
CCDC57-219ENST00000584717 ADGRB1O14514 1584 aa24.47■■□□□ 1.51
CCDC57-219ENST00000584717 ADGRB2O60241 1585 aa24.47■■□□□ 1.51
CCDC57-219ENST00000584717 PMFBP1Q8TBY8 1022 aa24.47■■□□□ 1.51
CCDC57-219ENST00000584717 BRWD3Q6RI45 1802 aa24.47■■□□□ 1.51
CCDC57-219ENST00000584717 ANKARQ7Z5J8 1434 aa24.45■■□□□ 1.51
CCDC57-219ENST00000584717 CCDC125Q86Z20 511 aa24.45■■□□□ 1.5
CCDC57-219ENST00000584717 ZRANB1Q9UGI0 708 aa24.45■■□□□ 1.5
CCDC57-219ENST00000584717 NWD2Q9ULI1 1742 aa24.44■■□□□ 1.5
CCDC57-219ENST00000584717 ARHGEF10O15013 1369 aa24.44■■□□□ 1.5
CCDC57-219ENST00000584717 HIRIP3Q9BW71 556 aaPredicted RBP24.44■■□□□ 1.5
CCDC57-219ENST00000584717 TRAK1Q9UPV9 953 aa24.44■■□□□ 1.5
CCDC57-219ENST00000584717 VPS72Q15906 364 aa24.42■■□□□ 1.5
CCDC57-219ENST00000584717 KDM2AQ9Y2K7 1162 aa24.42■■□□□ 1.5
CCDC57-219ENST00000584717 CCDC9Q9Y3X0 531 aaKnown RBP24.42■■□□□ 1.5
CCDC57-219ENST00000584717 TRPM3Q9HCF6 1732 aaPredicted RBP24.41■■□□□ 1.5
CCDC57-219ENST00000584717 MINK1Q8N4C8 1332 aaPredicted RBP24.41■■□□□ 1.5
CCDC57-219ENST00000584717 SEPT12Q8IYM1 358 aa24.41■■□□□ 1.5
CCDC57-219ENST00000584717 BLMP54132 1417 aaPredicted RBP24.4■■□□□ 1.5
CCDC57-219ENST00000584717 DCAF11Q8TEB1 546 aa24.39■■□□□ 1.49
CCDC57-219ENST00000584717 PRR36Q9H6K5 1346 aa24.38■■□□□ 1.49
CCDC57-219ENST00000584717 TULP4Q9NRJ4 1543 aa24.37■■□□□ 1.49
CCDC57-219ENST00000584717 FAM83GA6ND36 823 aa24.37■■□□□ 1.49
CCDC57-219ENST00000584717 ALS2Q96Q42 1657 aa24.37■■□□□ 1.49
CCDC57-219ENST00000584717 EIF3AQ14152 1382 aaKnown RBP24.36■■□□□ 1.49
CCDC57-219ENST00000584717 NRAPQ86VF7 1730 aa24.35■■□□□ 1.49
CCDC57-219ENST00000584717 GPRASP1Q5JY77 1395 aa24.35■■□□□ 1.49
CCDC57-219ENST00000584717 DEFB132Q7Z7B7 95 aa24.34■■□□□ 1.49
CCDC57-219ENST00000584717 WASLO00401 505 aaPredicted RBP24.33■■□□□ 1.49
CCDC57-219ENST00000584717 A0A0G2JS52 829 aa24.32■■□□□ 1.48
CCDC57-219ENST00000584717 ONECUT3O60422 494 aaPredicted RBP24.32■■□□□ 1.48
CCDC57-219ENST00000584717 MYT1Q01538 1121 aa24.32■■□□□ 1.48
CCDC57-219ENST00000584717 SF3B2Q13435 895 aaKnown RBP24.31■■□□□ 1.48
CCDC57-219ENST00000584717 KRT27Q7Z3Y8 459 aa24.31■■□□□ 1.48
CCDC57-219ENST00000584717 ARHGEF28Q8N1W1 1705 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms