RNA–Protein interactions for RNA: ENST00000584025.1

ITGB4-210, Transcript of integrin subunit beta 4, humanhuman

TSL 5

Gene ITGB4, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-210ENST00000584025 SIRT1Q96EB6 747 aa22.1■■□□□ 1.13
ITGB4-210ENST00000584025 POGKQ9P215 609 aa22.09■■□□□ 1.13
ITGB4-210ENST00000584025 CLSPNQ9HAW4 1339 aa22.08■■□□□ 1.13
ITGB4-210ENST00000584025 NBPF1Q3BBV0 1214 aa22.08■■□□□ 1.13
ITGB4-210ENST00000584025 CDC42BPGQ6DT37 1551 aa22.08■■□□□ 1.12
ITGB4-210ENST00000584025 SAFB2Q14151 953 aaKnown RBP eCLIP22.07■■□□□ 1.12
ITGB4-210ENST00000584025 PRAM1Q96QH2 718 aa22.07■■□□□ 1.12
ITGB4-210ENST00000584025 PHLPP1O60346 1717 aa22.06■■□□□ 1.12
ITGB4-210ENST00000584025 HSPA1LP34931 641 aa22.06■■□□□ 1.12
ITGB4-210ENST00000584025 RGPD8O14715 1765 aaPredicted RBP22.06■■□□□ 1.12
ITGB4-210ENST00000584025 MST1RQ04912 1400 aa22.06■■□□□ 1.12
ITGB4-210ENST00000584025 FMN2Q9NZ56 1722 aa22.05■■□□□ 1.12
ITGB4-210ENST00000584025 NBPF8Q3BBV2 869 aa22.02■■□□□ 1.12
ITGB4-210ENST00000584025 ROCK2O75116 1388 aaKnown RBP22■■□□□ 1.11
ITGB4-210ENST00000584025 C1orf167Q5SNV9 1468 aa22■■□□□ 1.11
ITGB4-210ENST00000584025 ADGRB2O60241 1585 aa21.99■■□□□ 1.11
ITGB4-210ENST00000584025 QRICH2Q9H0J4 1663 aa21.99■■□□□ 1.11
ITGB4-210ENST00000584025 MINK1Q8N4C8 1332 aaPredicted RBP21.99■■□□□ 1.11
ITGB4-210ENST00000584025 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
ITGB4-210ENST00000584025 NHSL1Q5SYE7 1610 aa21.98■■□□□ 1.11
ITGB4-210ENST00000584025 NUTM2FA1L443 756 aa21.97■■□□□ 1.11
ITGB4-210ENST00000584025 AHDC1Q5TGY3 1603 aaPredicted RBP21.96■■□□□ 1.11
ITGB4-210ENST00000584025 RALGAPBQ86X10 1494 aa21.96■■□□□ 1.11
ITGB4-210ENST00000584025 HIRIP3Q9BW71 556 aaPredicted RBP21.95■■□□□ 1.1
ITGB4-210ENST00000584025 COL16A1Q07092 1604 aaPredicted RBP21.94■■□□□ 1.1
ITGB4-210ENST00000584025 ORAI2Q96SN7 254 aa21.93■■□□□ 1.1
ITGB4-210ENST00000584025 TIMELESSQ9UNS1 1208 aa21.93■■□□□ 1.1
ITGB4-210ENST00000584025 ESCO1Q5FWF5 840 aa21.92■■□□□ 1.1
ITGB4-210ENST00000584025 KIF1AQ12756 1690 aa21.91■■□□□ 1.1
ITGB4-210ENST00000584025 GPRASP1Q5JY77 1395 aa21.91■■□□□ 1.1
ITGB4-210ENST00000584025 CENPJQ9HC77 1338 aaPredicted RBP21.91■■□□□ 1.1
ITGB4-210ENST00000584025 CARD11Q9BXL7 1154 aa21.91■■□□□ 1.1
ITGB4-210ENST00000584025 ITSN1Q15811 1721 aa21.91■■□□□ 1.1
ITGB4-210ENST00000584025 USP32Q8NFA0 1604 aa21.91■■□□□ 1.1
ITGB4-210ENST00000584025 EIF3AQ14152 1382 aaKnown RBP21.89■■□□□ 1.1
ITGB4-210ENST00000584025 WASLO00401 505 aaPredicted RBP21.88■■□□□ 1.09
ITGB4-210ENST00000584025 DDX17Q92841 729 aaKnown RBP21.88■■□□□ 1.09
ITGB4-210ENST00000584025 TULP4Q9NRJ4 1543 aa21.87■■□□□ 1.09
ITGB4-210ENST00000584025 ANKARQ7Z5J8 1434 aa21.87■■□□□ 1.09
ITGB4-210ENST00000584025 SHPRHQ149N8 1683 aa21.85■■□□□ 1.09
ITGB4-210ENST00000584025 CDK19Q9BWU1 502 aa21.83■■□□□ 1.09
ITGB4-210ENST00000584025 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
ITGB4-210ENST00000584025 JCADQ9P266 1359 aa21.82■■□□□ 1.08
ITGB4-210ENST00000584025 NPHP3Q7Z494 1330 aa21.81■■□□□ 1.08
ITGB4-210ENST00000584025 FOXO3O43524 673 aa21.81■■□□□ 1.08
ITGB4-210ENST00000584025 TOPAZ1Q8N9V7 1692 aa21.81■■□□□ 1.08
ITGB4-210ENST00000584025 PRR36Q9H6K5 1346 aa21.8■■□□□ 1.08
ITGB4-210ENST00000584025 MED1Q15648 1581 aaPredicted RBP21.8■■□□□ 1.08
ITGB4-210ENST00000584025 ATP7BP35670 1465 aa21.79■■□□□ 1.08
ITGB4-210ENST00000584025 LRRC59Q96AG4 307 aaKnown RBP21.79■■□□□ 1.08
ITGB4-210ENST00000584025 SRPK2P78362 688 aaKnown RBP21.78■■□□□ 1.08
ITGB4-210ENST00000584025 XPCQ01831 940 aaPredicted RBP21.78■■□□□ 1.08
ITGB4-210ENST00000584025 PMFBP1Q8TBY8 1022 aa21.78■■□□□ 1.08
ITGB4-210ENST00000584025 NUDT16Q96DE0 195 aaKnown RBP21.78■■□□□ 1.08
ITGB4-210ENST00000584025 SOS2Q07890 1332 aaPredicted RBP21.78■■□□□ 1.08
ITGB4-210ENST00000584025 PXDNQ92626 1479 aa21.77■■□□□ 1.08
ITGB4-210ENST00000584025 EVC2Q86UK5 1308 aa21.77■■□□□ 1.07
ITGB4-210ENST00000584025 CABP2Q9NPB3 220 aa21.75■■□□□ 1.07
ITGB4-210ENST00000584025 PSME1Q06323 249 aa21.73■■□□□ 1.07
ITGB4-210ENST00000584025 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
ITGB4-210ENST00000584025 USP47Q96K76 1375 aa21.73■■□□□ 1.07
ITGB4-210ENST00000584025 SBNO2Q9Y2G9 1366 aa21.73■■□□□ 1.07
ITGB4-210ENST00000584025 NGDNQ8NEJ9 315 aaKnown RBP21.72■■□□□ 1.07
ITGB4-210ENST00000584025 CCDC61Q9Y6R9 512 aa21.72■■□□□ 1.07
ITGB4-210ENST00000584025 PNPLA6Q8IY17 1366 aa21.72■■□□□ 1.07
ITGB4-210ENST00000584025 TRPM3Q9HCF6 1732 aaPredicted RBP21.72■■□□□ 1.07
ITGB4-210ENST00000584025 ST20-MTHFSA0A0A6YYL1 179 aa21.71■■□□□ 1.07
ITGB4-210ENST00000584025 SPATA31A6Q5VVP1 1343 aa21.71■■□□□ 1.07
ITGB4-210ENST00000584025 DISP3Q9P2K9 1392 aa21.71■■□□□ 1.07
ITGB4-210ENST00000584025 COL22A1Q8NFW1 1626 aaPredicted RBP21.7■■□□□ 1.06
ITGB4-210ENST00000584025 PPIP5K1Q6PFW1 1433 aa21.69■■□□□ 1.06
ITGB4-210ENST00000584025 NUTM2BA6NNL0 878 aaPredicted RBP21.68■■□□□ 1.06
ITGB4-210ENST00000584025 NUTM2EB1AL46 878 aaPredicted RBP21.68■■□□□ 1.06
ITGB4-210ENST00000584025 NUTM2AQ8IVF1 878 aaPredicted RBP21.68■■□□□ 1.06
ITGB4-210ENST00000584025 AKAP12Q02952 1782 aa21.66■■□□□ 1.06
ITGB4-210ENST00000584025 MARF1Q9Y4F3 1742 aaKnown RBP21.66■■□□□ 1.06
ITGB4-210ENST00000584025 ALS2Q96Q42 1657 aa21.66■■□□□ 1.06
ITGB4-210ENST00000584025 TNS3Q68CZ2 1445 aa21.66■■□□□ 1.06
ITGB4-210ENST00000584025 SPATA31A3Q5VYP0 1347 aa21.66■■□□□ 1.06
ITGB4-210ENST00000584025 PHF23Q9BUL5 403 aaPredicted RBP21.66■■□□□ 1.06
ITGB4-210ENST00000584025 LRP6O75581 1613 aa21.66■■□□□ 1.06
ITGB4-210ENST00000584025 SBNO1A3KN83 1393 aa21.65■■□□□ 1.06
ITGB4-210ENST00000584025 ACEP12821 1306 aa21.65■■□□□ 1.06
ITGB4-210ENST00000584025 PLEKHG3A1L390 1219 aa21.65■■□□□ 1.06
ITGB4-210ENST00000584025 MEX3CQ5U5Q3 659 aaKnown RBP21.65■■□□□ 1.06
ITGB4-210ENST00000584025 LMOD2Q6P5Q4 547 aa21.65■■□□□ 1.06
ITGB4-210ENST00000584025 ATAD2Q6PL18 1390 aa21.64■■□□□ 1.06
ITGB4-210ENST00000584025 TESK2Q96S53 571 aa21.64■■□□□ 1.05
ITGB4-210ENST00000584025 POLR3AO14802 1390 aaPredicted RBP21.63■■□□□ 1.05
ITGB4-210ENST00000584025 SLC24A1O60721 1099 aa21.63■■□□□ 1.05
ITGB4-210ENST00000584025 CABP1Q9NZU7 370 aa21.63■■□□□ 1.05
ITGB4-210ENST00000584025 PAK3O75914 559 aaPredicted RBP21.62■■□□□ 1.05
ITGB4-210ENST00000584025 ABCA3Q99758 1704 aa21.62■■□□□ 1.05
ITGB4-210ENST00000584025 ARHGEF10O15013 1369 aa21.61■■□□□ 1.05
ITGB4-210ENST00000584025 PLEKHG5O94827 1062 aa21.59■■□□□ 1.05
ITGB4-210ENST00000584025 MON2Q7Z3U7 1717 aa21.58■■□□□ 1.05
ITGB4-210ENST00000584025 TMF1P82094 1093 aa21.58■■□□□ 1.05
ITGB4-210ENST00000584025 ADAMTS2O95450 1211 aa21.57■■□□□ 1.04
ITGB4-210ENST00000584025 EIF4G2P78344 907 aaKnown RBP eCLIP21.57■■□□□ 1.04
ITGB4-210ENST00000584025 TMC1Q8TDI8 760 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms