RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 IFT172Q9UG01 1749 aa20.27■□□□□ 0.83
CCDC57-218ENST00000583593 CDC42BPGQ6DT37 1551 aa20.26■□□□□ 0.83
CCDC57-218ENST00000583593 SPATA31E1Q6ZUB1 1445 aa20.25■□□□□ 0.83
CCDC57-218ENST00000583593 PXDNQ92626 1479 aa20.24■□□□□ 0.83
CCDC57-218ENST00000583593 RGL3Q3MIN7 710 aa20.23■□□□□ 0.83
CCDC57-218ENST00000583593 ESCO1Q5FWF5 840 aa20.23■□□□□ 0.83
CCDC57-218ENST00000583593 WAPLQ7Z5K2 1190 aa20.23■□□□□ 0.83
CCDC57-218ENST00000583593 FNBP4Q8N3X1 1017 aaPredicted RBP20.23■□□□□ 0.83
CCDC57-218ENST00000583593 CCDC144AA2RUR9 1427 aa20.22■□□□□ 0.83
CCDC57-218ENST00000583593 TECPR2O15040 1411 aa20.22■□□□□ 0.83
CCDC57-218ENST00000583593 USP21Q9UK80 565 aa20.22■□□□□ 0.83
CCDC57-218ENST00000583593 MYOM2P54296 1465 aa20.22■□□□□ 0.83
CCDC57-218ENST00000583593 STK26Q9P289 416 aa20.21■□□□□ 0.83
CCDC57-218ENST00000583593 NPHP3Q7Z494 1330 aa20.21■□□□□ 0.83
CCDC57-218ENST00000583593 KNDC1Q76NI1 1749 aa20.2■□□□□ 0.82
CCDC57-218ENST00000583593 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
CCDC57-218ENST00000583593 LRPPRCP42704 1394 aaKnown RBP20.2■□□□□ 0.82
CCDC57-218ENST00000583593 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
CCDC57-218ENST00000583593 FOXO3O43524 673 aa20.19■□□□□ 0.82
CCDC57-218ENST00000583593 TMEM132EQ6IEE7 984 aa20.19■□□□□ 0.82
CCDC57-218ENST00000583593 ABCC11Q96J66 1382 aa20.19■□□□□ 0.82
CCDC57-218ENST00000583593 MARF1Q9Y4F3 1742 aaKnown RBP20.19■□□□□ 0.82
CCDC57-218ENST00000583593 ATRNO75882 1429 aa20.19■□□□□ 0.82
CCDC57-218ENST00000583593 XPCQ01831 940 aaPredicted RBP20.18■□□□□ 0.82
CCDC57-218ENST00000583593 TRPC5Q9UL62 973 aaPredicted RBP20.18■□□□□ 0.82
CCDC57-218ENST00000583593 ANKRD30BQ9BXX2 1392 aa20.18■□□□□ 0.82
CCDC57-218ENST00000583593 PIK3C2GO75747 1445 aa20.18■□□□□ 0.82
CCDC57-218ENST00000583593 NUTM2FA1L443 756 aa20.17■□□□□ 0.82
CCDC57-218ENST00000583593 EP400Q96L91 3159 aa20.16■□□□□ 0.82
CCDC57-218ENST00000583593 BCL9LQ86UU0 1499 aa20.16■□□□□ 0.82
CCDC57-218ENST00000583593 FMN2Q9NZ56 1722 aa20.16■□□□□ 0.82
CCDC57-218ENST00000583593 SRCAPQ6ZRS2 3230 aa20.14■□□□□ 0.81
CCDC57-218ENST00000583593 YTHDC2Q9H6S0 1430 aaKnown RBP20.13■□□□□ 0.81
CCDC57-218ENST00000583593 ATAD2Q6PL18 1390 aa20.13■□□□□ 0.81
CCDC57-218ENST00000583593 RGPD8O14715 1765 aaPredicted RBP20.11■□□□□ 0.81
CCDC57-218ENST00000583593 SIRT1Q96EB6 747 aa20.1■□□□□ 0.81
CCDC57-218ENST00000583593 C14orf93Q9H972 538 aaKnown RBP20.1■□□□□ 0.81
CCDC57-218ENST00000583593 KIF1AQ12756 1690 aa20.1■□□□□ 0.81
CCDC57-218ENST00000583593 SPATA31A3Q5VYP0 1347 aa20.09■□□□□ 0.81
CCDC57-218ENST00000583593 NRXN1Q9ULB1 1477 aa20.09■□□□□ 0.81
CCDC57-218ENST00000583593 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.08■□□□□ 0.81
CCDC57-218ENST00000583593 GJD4Q96KN9 370 aaPredicted RBP20.08■□□□□ 0.81
CCDC57-218ENST00000583593 SLIT2O94813 1529 aa20.07■□□□□ 0.8
CCDC57-218ENST00000583593 CFAP70Q5T0N1 1121 aa20.06■□□□□ 0.8
CCDC57-218ENST00000583593 KRT28Q7Z3Y7 464 aa20.06■□□□□ 0.8
CCDC57-218ENST00000583593 GLI3P10071 1580 aa20.04■□□□□ 0.8
CCDC57-218ENST00000583593 USP32Q8NFA0 1604 aa20.04■□□□□ 0.8
CCDC57-218ENST00000583593 UNC5CLQ8IV45 518 aa20.03■□□□□ 0.8
CCDC57-218ENST00000583593 PHF8Q9UPP1 1060 aa20.03■□□□□ 0.8
CCDC57-218ENST00000583593 DHX57Q6P158 1386 aaKnown RBP20.02■□□□□ 0.8
CCDC57-218ENST00000583593 RALGAPBQ86X10 1494 aa20.01■□□□□ 0.79
CCDC57-218ENST00000583593 PRAM1Q96QH2 718 aa20.01■□□□□ 0.79
CCDC57-218ENST00000583593 TNS3Q68CZ2 1445 aa20.01■□□□□ 0.79
CCDC57-218ENST00000583593 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
CCDC57-218ENST00000583593 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
CCDC57-218ENST00000583593 CABLES1Q8TDN4 633 aa19.99■□□□□ 0.79
CCDC57-218ENST00000583593 ABCA3Q99758 1704 aa19.99■□□□□ 0.79
CCDC57-218ENST00000583593 CCDC125Q86Z20 511 aa19.98■□□□□ 0.79
CCDC57-218ENST00000583593 ACIN1Q9UKV3 1341 aaKnown RBP19.98■□□□□ 0.79
CCDC57-218ENST00000583593 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
CCDC57-218ENST00000583593 SBNO1A3KN83 1393 aa19.97■□□□□ 0.79
CCDC57-218ENST00000583593 ADGRB1O14514 1584 aa19.97■□□□□ 0.79
CCDC57-218ENST00000583593 PSME1Q06323 249 aa19.97■□□□□ 0.79
CCDC57-218ENST00000583593 PLCH1Q4KWH8 1693 aa19.97■□□□□ 0.79
CCDC57-218ENST00000583593 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.79
CCDC57-218ENST00000583593 NWD2Q9ULI1 1742 aa19.95■□□□□ 0.78
CCDC57-218ENST00000583593 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
CCDC57-218ENST00000583593 PMFBP1Q8TBY8 1022 aa19.94■□□□□ 0.78
CCDC57-218ENST00000583593 ZRANB1Q9UGI0 708 aa19.94■□□□□ 0.78
CCDC57-218ENST00000583593 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
CCDC57-218ENST00000583593 PLEKHG5O94827 1062 aa19.93■□□□□ 0.78
CCDC57-218ENST00000583593 VPS72Q15906 364 aa19.93■□□□□ 0.78
CCDC57-218ENST00000583593 POGKQ9P215 609 aa19.93■□□□□ 0.78
CCDC57-218ENST00000583593 TRPM3Q9HCF6 1732 aaPredicted RBP19.93■□□□□ 0.78
CCDC57-218ENST00000583593 ONECUT3O60422 494 aaPredicted RBP19.92■□□□□ 0.78
CCDC57-218ENST00000583593 HAP1P54257 671 aaPredicted RBP19.92■□□□□ 0.78
CCDC57-218ENST00000583593 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
CCDC57-218ENST00000583593 ARHGEF10O15013 1369 aa19.91■□□□□ 0.78
CCDC57-218ENST00000583593 BLMP54132 1417 aaPredicted RBP19.91■□□□□ 0.78
CCDC57-218ENST00000583593 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
CCDC57-218ENST00000583593 LMOD2Q6P5Q4 547 aa19.9■□□□□ 0.78
CCDC57-218ENST00000583593 TRAK1Q9UPV9 953 aa19.9■□□□□ 0.78
CCDC57-218ENST00000583593 PRR36Q9H6K5 1346 aa19.9■□□□□ 0.78
CCDC57-218ENST00000583593 ALS2Q96Q42 1657 aa19.9■□□□□ 0.78
CCDC57-218ENST00000583593 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
CCDC57-218ENST00000583593 NRAPQ86VF7 1730 aa19.88■□□□□ 0.77
CCDC57-218ENST00000583593 DEFB132Q7Z7B7 95 aa19.88■□□□□ 0.77
CCDC57-218ENST00000583593 KDM2AQ9Y2K7 1162 aa19.87■□□□□ 0.77
CCDC57-218ENST00000583593 MINK1Q8N4C8 1332 aaPredicted RBP19.86■□□□□ 0.77
CCDC57-218ENST00000583593 TULP4Q9NRJ4 1543 aa19.86■□□□□ 0.77
CCDC57-218ENST00000583593 DCAF11Q8TEB1 546 aa19.85■□□□□ 0.77
CCDC57-218ENST00000583593 CCDC9Q9Y3X0 531 aaKnown RBP19.85■□□□□ 0.77
CCDC57-218ENST00000583593 CRYBG1Q9Y4K1 1723 aa19.85■□□□□ 0.77
CCDC57-218ENST00000583593 WASLO00401 505 aaPredicted RBP19.84■□□□□ 0.77
CCDC57-218ENST00000583593 KRT27Q7Z3Y8 459 aa19.83■□□□□ 0.77
CCDC57-218ENST00000583593 BTG4Q9NY30 223 aa19.82■□□□□ 0.76
CCDC57-218ENST00000583593 COL14A1Q05707 1796 aaKnown RBP19.82■□□□□ 0.76
CCDC57-218ENST00000583593 EIF3AQ14152 1382 aaKnown RBP19.82■□□□□ 0.76
CCDC57-218ENST00000583593 GPRASP1Q5JY77 1395 aa19.82■□□□□ 0.76
CCDC57-218ENST00000583593 ARHGEF28Q8N1W1 1705 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms