RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 FOXD1Q16676 465 aa14.47□□□□□ -0.09
CDK5RAP3-227ENST00000583352 CDC42BPGQ6DT37 1551 aa14.47□□□□□ -0.09
CDK5RAP3-227ENST00000583352 ADGRF5Q8IZF2 1346 aa14.45□□□□□ -0.1
CDK5RAP3-227ENST00000583352 ESCO1Q5FWF5 840 aa14.45□□□□□ -0.1
CDK5RAP3-227ENST00000583352 ANKRD30BQ9BXX2 1392 aa14.45□□□□□ -0.1
CDK5RAP3-227ENST00000583352 NPHP3Q7Z494 1330 aa14.44□□□□□ -0.1
CDK5RAP3-227ENST00000583352 RGL3Q3MIN7 710 aa14.44□□□□□ -0.1
CDK5RAP3-227ENST00000583352 USP21Q9UK80 565 aa14.44□□□□□ -0.1
CDK5RAP3-227ENST00000583352 COL22A1Q8NFW1 1626 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-227ENST00000583352 SPATA31E1Q6ZUB1 1445 aa14.43□□□□□ -0.1
CDK5RAP3-227ENST00000583352 MPHOSPH9Q99550 1183 aa14.43□□□□□ -0.1
CDK5RAP3-227ENST00000583352 STK26Q9P289 416 aa14.43□□□□□ -0.1
CDK5RAP3-227ENST00000583352 TRPC5Q9UL62 973 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-227ENST00000583352 LRPPRCP42704 1394 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-227ENST00000583352 TECPR2O15040 1411 aa14.42□□□□□ -0.1
CDK5RAP3-227ENST00000583352 IFT172Q9UG01 1749 aa14.41□□□□□ -0.1
CDK5RAP3-227ENST00000583352 WAPLQ7Z5K2 1190 aa14.41□□□□□ -0.1
CDK5RAP3-227ENST00000583352 FNBP4Q8N3X1 1017 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-227ENST00000583352 MYOM2P54296 1465 aa14.4□□□□□ -0.1
CDK5RAP3-227ENST00000583352 PXDNQ92626 1479 aa14.4□□□□□ -0.1
CDK5RAP3-227ENST00000583352 ABCC11Q96J66 1382 aa14.4□□□□□ -0.1
CDK5RAP3-227ENST00000583352 FOXO3O43524 673 aa14.4□□□□□ -0.1
CDK5RAP3-227ENST00000583352 KNDC1Q76NI1 1749 aa14.4□□□□□ -0.1
CDK5RAP3-227ENST00000583352 ATAD2Q6PL18 1390 aa14.39□□□□□ -0.11
CDK5RAP3-227ENST00000583352 NUTM2FA1L443 756 aa14.39□□□□□ -0.11
CDK5RAP3-227ENST00000583352 XPCQ01831 940 aaPredicted RBP14.39□□□□□ -0.11
CDK5RAP3-227ENST00000583352 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
CDK5RAP3-227ENST00000583352 PIK3C2GO75747 1445 aa14.39□□□□□ -0.11
CDK5RAP3-227ENST00000583352 ATRNO75882 1429 aa14.39□□□□□ -0.11
CDK5RAP3-227ENST00000583352 PLEKHH1Q9ULM0 1364 aa14.38□□□□□ -0.11
CDK5RAP3-227ENST00000583352 ACIN1Q9UKV3 1341 aaKnown RBP14.38□□□□□ -0.11
CDK5RAP3-227ENST00000583352 YTHDC2Q9H6S0 1430 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-227ENST00000583352 FMN2Q9NZ56 1722 aa14.36□□□□□ -0.11
CDK5RAP3-227ENST00000583352 MARF1Q9Y4F3 1742 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-227ENST00000583352 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
CDK5RAP3-227ENST00000583352 SIRT1Q96EB6 747 aa14.35□□□□□ -0.11
CDK5RAP3-227ENST00000583352 BCL9LQ86UU0 1499 aa14.35□□□□□ -0.11
CDK5RAP3-227ENST00000583352 C14orf93Q9H972 538 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-227ENST00000583352 SPATA31A3Q5VYP0 1347 aa14.33□□□□□ -0.12
CDK5RAP3-227ENST00000583352 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-227ENST00000583352 KRT28Q7Z3Y7 464 aa14.32□□□□□ -0.12
CDK5RAP3-227ENST00000583352 GJD4Q96KN9 370 aaPredicted RBP14.32□□□□□ -0.12
CDK5RAP3-227ENST00000583352 NRXN1Q9ULB1 1477 aa14.31□□□□□ -0.12
CDK5RAP3-227ENST00000583352 CFAP70Q5T0N1 1121 aa14.31□□□□□ -0.12
CDK5RAP3-227ENST00000583352 PHF8Q9UPP1 1060 aa14.31□□□□□ -0.12
CDK5RAP3-227ENST00000583352 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-227ENST00000583352 HAP1P54257 671 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-227ENST00000583352 PSME1Q06323 249 aa14.3□□□□□ -0.12
CDK5RAP3-227ENST00000583352 UNC5CLQ8IV45 518 aa14.3□□□□□ -0.12
CDK5RAP3-227ENST00000583352 CCDC125Q86Z20 511 aa14.29□□□□□ -0.12
CDK5RAP3-227ENST00000583352 TNS3Q68CZ2 1445 aa14.29□□□□□ -0.12
CDK5RAP3-227ENST00000583352 SLIT2O94813 1529 aa14.29□□□□□ -0.12
CDK5RAP3-227ENST00000583352 USP32Q8NFA0 1604 aa14.29□□□□□ -0.12
CDK5RAP3-227ENST00000583352 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-227ENST00000583352 SAFB2Q14151 953 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDK5RAP3-227ENST00000583352 PRAM1Q96QH2 718 aa14.28□□□□□ -0.12
CDK5RAP3-227ENST00000583352 DLC1Q96QB1 1528 aa14.27□□□□□ -0.12
CDK5RAP3-227ENST00000583352 RALGAPBQ86X10 1494 aa14.27□□□□□ -0.12
CDK5RAP3-227ENST00000583352 POGKQ9P215 609 aa14.27□□□□□ -0.13
CDK5RAP3-227ENST00000583352 SBNO1A3KN83 1393 aa14.26□□□□□ -0.13
CDK5RAP3-227ENST00000583352 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
CDK5RAP3-227ENST00000583352 GLI3P10071 1580 aa14.26□□□□□ -0.13
CDK5RAP3-227ENST00000583352 ANKARQ7Z5J8 1434 aa14.25□□□□□ -0.13
CDK5RAP3-227ENST00000583352 ARHGEF10O15013 1369 aa14.25□□□□□ -0.13
CDK5RAP3-227ENST00000583352 LMOD2Q6P5Q4 547 aa14.25□□□□□ -0.13
CDK5RAP3-227ENST00000583352 RAB3GAP2Q9H2M9 1393 aa14.24□□□□□ -0.13
CDK5RAP3-227ENST00000583352 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
CDK5RAP3-227ENST00000583352 CABLES1Q8TDN4 633 aa14.24□□□□□ -0.13
CDK5RAP3-227ENST00000583352 ADGRB2O60241 1585 aa14.23□□□□□ -0.13
CDK5RAP3-227ENST00000583352 VPS72Q15906 364 aa14.23□□□□□ -0.13
CDK5RAP3-227ENST00000583352 PMFBP1Q8TBY8 1022 aa14.23□□□□□ -0.13
CDK5RAP3-227ENST00000583352 ADGRB1O14514 1584 aa14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 ABCA3Q99758 1704 aa14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 NWD2Q9ULI1 1742 aa14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 TRAK1Q9UPV9 953 aa14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 CCDC9Q9Y3X0 531 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 PLCH1Q4KWH8 1693 aa14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 BLMP54132 1417 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-227ENST00000583352 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.13
CDK5RAP3-227ENST00000583352 HRCP23327 699 aa14.2□□□□□ -0.14
CDK5RAP3-227ENST00000583352 HIRIP3Q9BW71 556 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP3-227ENST00000583352 KDM2AQ9Y2K7 1162 aa14.2□□□□□ -0.14
CDK5RAP3-227ENST00000583352 GPRASP1Q5JY77 1395 aa14.2□□□□□ -0.14
CDK5RAP3-227ENST00000583352 BRWD3Q6RI45 1802 aa14.2□□□□□ -0.14
CDK5RAP3-227ENST00000583352 MINK1Q8N4C8 1332 aaPredicted RBP14.19□□□□□ -0.14
CDK5RAP3-227ENST00000583352 SF3B2Q13435 895 aaKnown RBP14.19□□□□□ -0.14
CDK5RAP3-227ENST00000583352 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
CDK5RAP3-227ENST00000583352 FAM83GA6ND36 823 aa14.18□□□□□ -0.14
CDK5RAP3-227ENST00000583352 STAC3Q96MF2 364 aa14.18□□□□□ -0.14
CDK5RAP3-227ENST00000583352 TULP4Q9NRJ4 1543 aa14.18□□□□□ -0.14
CDK5RAP3-227ENST00000583352 TRPM3Q9HCF6 1732 aaPredicted RBP14.18□□□□□ -0.14
CDK5RAP3-227ENST00000583352 WASLO00401 505 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-227ENST00000583352 ONECUT3O60422 494 aaPredicted RBP14.17□□□□□ -0.14
CDK5RAP3-227ENST00000583352 KRT27Q7Z3Y8 459 aa14.17□□□□□ -0.14
CDK5RAP3-227ENST00000583352 PRR36Q9H6K5 1346 aa14.16□□□□□ -0.14
CDK5RAP3-227ENST00000583352 A0A0G2JS52 829 aa14.16□□□□□ -0.14
CDK5RAP3-227ENST00000583352 MYT1Q01538 1121 aa14.16□□□□□ -0.14
CDK5RAP3-227ENST00000583352 ALS2Q96Q42 1657 aa14.15□□□□□ -0.14
CDK5RAP3-227ENST00000583352 DEFB132Q7Z7B7 95 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms