RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 BCL9LQ86UU0 1499 aa26.56■■□□□ 1.84
SNX11-212ENST00000583320 ITGAEP38570 1179 aa26.55■■□□□ 1.84
SNX11-212ENST00000583320 MARF1Q9Y4F3 1742 aaKnown RBP26.53■■□□□ 1.84
SNX11-212ENST00000583320 PRAG1Q86YV5 1406 aa26.53■■□□□ 1.84
SNX11-212ENST00000583320 KIF1BO60333 1816 aa26.51■■□□□ 1.83
SNX11-212ENST00000583320 PXDNQ92626 1479 aa26.51■■□□□ 1.83
SNX11-212ENST00000583320 CDC42BPGQ6DT37 1551 aa26.46■■□□□ 1.83
SNX11-212ENST00000583320 GLI3P10071 1580 aa26.46■■□□□ 1.83
SNX11-212ENST00000583320 XPCQ01831 940 aaPredicted RBP26.45■■□□□ 1.82
SNX11-212ENST00000583320 CCDC125Q86Z20 511 aa26.44■■□□□ 1.82
SNX11-212ENST00000583320 HFM1A2PYH4 1435 aa26.44■■□□□ 1.82
SNX11-212ENST00000583320 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.44■■□□□ 1.82
SNX11-212ENST00000583320 FOXD1Q16676 465 aa26.43■■□□□ 1.82
SNX11-212ENST00000583320 GJD4Q96KN9 370 aaPredicted RBP26.43■■□□□ 1.82
SNX11-212ENST00000583320 NPHP3Q7Z494 1330 aa26.41■■□□□ 1.82
SNX11-212ENST00000583320 ESCO1Q5FWF5 840 aa26.41■■□□□ 1.82
SNX11-212ENST00000583320 RALGAPBQ86X10 1494 aa26.41■■□□□ 1.82
SNX11-212ENST00000583320 BRWD3Q6RI45 1802 aa26.39■■□□□ 1.82
SNX11-212ENST00000583320 PPLO60437 1756 aa26.39■■□□□ 1.82
SNX11-212ENST00000583320 BLMP54132 1417 aaPredicted RBP26.39■■□□□ 1.81
SNX11-212ENST00000583320 VGFO15240 615 aaPredicted RBP26.38■■□□□ 1.81
SNX11-212ENST00000583320 FOXO3O43524 673 aa26.38■■□□□ 1.81
SNX11-212ENST00000583320 SLIT2O94813 1529 aa26.38■■□□□ 1.81
SNX11-212ENST00000583320 HRCP23327 699 aa26.36■■□□□ 1.81
SNX11-212ENST00000583320 DEFB132Q7Z7B7 95 aa26.36■■□□□ 1.81
SNX11-212ENST00000583320 NAIPQ13075 1403 aa26.35■■□□□ 1.81
SNX11-212ENST00000583320 NUTM2FA1L443 756 aa26.33■■□□□ 1.81
SNX11-212ENST00000583320 LRP5O75197 1615 aa26.32■■□□□ 1.8
SNX11-212ENST00000583320 USP32Q8NFA0 1604 aa26.32■■□□□ 1.8
SNX11-212ENST00000583320 UNC5CLQ8IV45 518 aa26.32■■□□□ 1.8
SNX11-212ENST00000583320 RPGRIP1LQ68CZ1 1315 aa26.29■■□□□ 1.8
SNX11-212ENST00000583320 WAPLQ7Z5K2 1190 aa26.27■■□□□ 1.8
SNX11-212ENST00000583320 SPATA31A3Q5VYP0 1347 aa26.27■■□□□ 1.8
SNX11-212ENST00000583320 RAB3GAP2Q9H2M9 1393 aa26.27■■□□□ 1.8
SNX11-212ENST00000583320 PLEKHH1Q9ULM0 1364 aa26.27■■□□□ 1.8
SNX11-212ENST00000583320 FMN2Q9NZ56 1722 aa26.27■■□□□ 1.8
SNX11-212ENST00000583320 TECPR2O15040 1411 aa26.26■■□□□ 1.79
SNX11-212ENST00000583320 LRPPRCP42704 1394 aaKnown RBP26.26■■□□□ 1.79
SNX11-212ENST00000583320 PLCH1Q4KWH8 1693 aa26.25■■□□□ 1.79
SNX11-212ENST00000583320 ACIN1Q9UKV3 1341 aaKnown RBP26.25■■□□□ 1.79
SNX11-212ENST00000583320 SEPT12Q8IYM1 358 aa26.25■■□□□ 1.79
SNX11-212ENST00000583320 STK26Q9P289 416 aa26.24■■□□□ 1.79
SNX11-212ENST00000583320 KIF1AQ12756 1690 aa26.24■■□□□ 1.79
SNX11-212ENST00000583320 ADGRF5Q8IZF2 1346 aa26.23■■□□□ 1.79
SNX11-212ENST00000583320 KNDC1Q76NI1 1749 aa26.22■■□□□ 1.79
SNX11-212ENST00000583320 ABCA3Q99758 1704 aa26.22■■□□□ 1.79
SNX11-212ENST00000583320 CCDC144AA2RUR9 1427 aa26.21■■□□□ 1.79
SNX11-212ENST00000583320 CABLES1Q8TDN4 633 aa26.19■■□□□ 1.78
SNX11-212ENST00000583320 PSDA5PKW4 1024 aaPredicted RBP26.18■■□□□ 1.78
SNX11-212ENST00000583320 VPS72Q15906 364 aa26.18■■□□□ 1.78
SNX11-212ENST00000583320 NWD2Q9ULI1 1742 aa26.18■■□□□ 1.78
SNX11-212ENST00000583320 RGPD8O14715 1765 aaPredicted RBP26.18■■□□□ 1.78
SNX11-212ENST00000583320 IFT172Q9UG01 1749 aa26.17■■□□□ 1.78
SNX11-212ENST00000583320 TNS3Q68CZ2 1445 aa26.17■■□□□ 1.78
SNX11-212ENST00000583320 SF3B2Q13435 895 aaKnown RBP26.17■■□□□ 1.78
SNX11-212ENST00000583320 KRT28Q7Z3Y7 464 aa26.17■■□□□ 1.78
SNX11-212ENST00000583320 PLEKHG5O94827 1062 aa26.16■■□□□ 1.78
SNX11-212ENST00000583320 TMEM132EQ6IEE7 984 aa26.16■■□□□ 1.78
SNX11-212ENST00000583320 ONECUT3O60422 494 aaPredicted RBP26.15■■□□□ 1.78
SNX11-212ENST00000583320 ABCC11Q96J66 1382 aa26.15■■□□□ 1.78
SNX11-212ENST00000583320 KRT27Q7Z3Y8 459 aa26.14■■□□□ 1.78
SNX11-212ENST00000583320 CCER1Q8TC90 406 aaPredicted RBP26.13■■□□□ 1.77
SNX11-212ENST00000583320 SLC4A1APQ9BWU0 796 aaKnown RBP26.13■■□□□ 1.77
SNX11-212ENST00000583320 SPATA31E1Q6ZUB1 1445 aa26.12■■□□□ 1.77
SNX11-212ENST00000583320 NRAPQ86VF7 1730 aa26.11■■□□□ 1.77
SNX11-212ENST00000583320 CCDC9Q9Y3X0 531 aaKnown RBP26.11■■□□□ 1.77
SNX11-212ENST00000583320 HAP1P54257 671 aaPredicted RBP26.1■■□□□ 1.77
SNX11-212ENST00000583320 PIK3C2GO75747 1445 aa26.1■■□□□ 1.77
SNX11-212ENST00000583320 YTHDC2Q9H6S0 1430 aaKnown RBP26.1■■□□□ 1.77
SNX11-212ENST00000583320 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
SNX11-212ENST00000583320 RGL3Q3MIN7 710 aa26.08■■□□□ 1.77
SNX11-212ENST00000583320 CLSPNQ9HAW4 1339 aa26.08■■□□□ 1.77
SNX11-212ENST00000583320 NRXN1Q9ULB1 1477 aa26.07■■□□□ 1.76
SNX11-212ENST00000583320 PHF8Q9UPP1 1060 aa26.07■■□□□ 1.76
SNX11-212ENST00000583320 FAM83GA6ND36 823 aa26.06■■□□□ 1.76
SNX11-212ENST00000583320 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
SNX11-212ENST00000583320 SBNO1A3KN83 1393 aa26.06■■□□□ 1.76
SNX11-212ENST00000583320 BAG6P46379 1132 aa26.05■■□□□ 1.76
SNX11-212ENST00000583320 FAM98CQ17RN3 349 aaKnown RBP26.04■■□□□ 1.76
SNX11-212ENST00000583320 ANKRD30BQ9BXX2 1392 aa26.04■■□□□ 1.76
SNX11-212ENST00000583320 A0A0G2JS52 829 aa26.03■■□□□ 1.76
SNX11-212ENST00000583320 MYT1Q01538 1121 aa26.03■■□□□ 1.76
SNX11-212ENST00000583320 LMOD2Q6P5Q4 547 aa26.03■■□□□ 1.76
SNX11-212ENST00000583320 RGPD1P0DJD0 1748 aa26.02■■□□□ 1.76
SNX11-212ENST00000583320 EN1Q05925 392 aaPredicted RBP26.02■■□□□ 1.76
SNX11-212ENST00000583320 ARHGEF10O15013 1369 aa26.01■■□□□ 1.75
SNX11-212ENST00000583320 PSME1Q06323 249 aa26.01■■□□□ 1.75
SNX11-212ENST00000583320 FAM182BQ5T319 152 aa26.01■■□□□ 1.75
SNX11-212ENST00000583320 TNS1Q9HBL0 1735 aaKnown RBP26.01■■□□□ 1.75
SNX11-212ENST00000583320 TRPM3Q9HCF6 1732 aaPredicted RBP26■■□□□ 1.75
SNX11-212ENST00000583320 R3HDM1Q15032 1099 aaKnown RBP25.98■■□□□ 1.75
SNX11-212ENST00000583320 THSD7AQ9UPZ6 1657 aa25.97■■□□□ 1.75
SNX11-212ENST00000583320 BTG4Q9NY30 223 aa25.97■■□□□ 1.75
SNX11-212ENST00000583320 COL14A1Q05707 1796 aaKnown RBP25.97■■□□□ 1.75
SNX11-212ENST00000583320 SAFB2Q14151 953 aaKnown RBP eCLIP25.96■■□□□ 1.75
SNX11-212ENST00000583320 SIRT1Q96EB6 747 aa25.96■■□□□ 1.75
SNX11-212ENST00000583320 ALS2Q96Q42 1657 aa25.96■■□□□ 1.75
SNX11-212ENST00000583320 PMFBP1Q8TBY8 1022 aa25.95■■□□□ 1.74
SNX11-212ENST00000583320 DISP2A7MBM2 1401 aa25.95■■□□□ 1.74
SNX11-212ENST00000583320 CRYBG1Q9Y4K1 1723 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms