RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 ROBO2Q9HCK4 1378 aa20.25■□□□□ 0.83
SENP3-208ENST00000583277 ADGRB2O60241 1585 aa20.24■□□□□ 0.83
SENP3-208ENST00000583277 SAFB2Q14151 953 aaKnown RBP eCLIP20.24■□□□□ 0.83
SENP3-208ENST00000583277 AMOTL2Q9Y2J4 779 aa20.24■□□□□ 0.83
SENP3-208ENST00000583277 NWD1Q149M9 1564 aa20.24■□□□□ 0.83
SENP3-208ENST00000583277 PLEKHH1Q9ULM0 1364 aa20.23■□□□□ 0.83
SENP3-208ENST00000583277 STRCQ7RTU9 1775 aa20.22■□□□□ 0.83
SENP3-208ENST00000583277 HSPA2P54652 639 aa20.22■□□□□ 0.83
SENP3-208ENST00000583277 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
SENP3-208ENST00000583277 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
SENP3-208ENST00000583277 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.19■□□□□ 0.82
SENP3-208ENST00000583277 ATAD2Q6PL18 1390 aa20.18■□□□□ 0.82
SENP3-208ENST00000583277 NINLQ9Y2I6 1382 aa20.18■□□□□ 0.82
SENP3-208ENST00000583277 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
SENP3-208ENST00000583277 KCNA6P17658 529 aa20.17■□□□□ 0.82
SENP3-208ENST00000583277 ANP32CO43423 234 aa20.15■□□□□ 0.82
SENP3-208ENST00000583277 SRPK2P78362 688 aaKnown RBP20.15■□□□□ 0.82
SENP3-208ENST00000583277 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
SENP3-208ENST00000583277 CDK19Q9BWU1 502 aa20.12■□□□□ 0.81
SENP3-208ENST00000583277 MIER1Q8N108 512 aa20.12■□□□□ 0.81
SENP3-208ENST00000583277 CABP2Q9NPB3 220 aa20.12■□□□□ 0.81
SENP3-208ENST00000583277 NALCNQ8IZF0 1738 aa20.12■□□□□ 0.81
SENP3-208ENST00000583277 PANK3Q9H999 370 aa20.11■□□□□ 0.81
SENP3-208ENST00000583277 CDC42BPGQ6DT37 1551 aa20.1■□□□□ 0.81
SENP3-208ENST00000583277 TMC1Q8TDI8 760 aa20.08■□□□□ 0.81
SENP3-208ENST00000583277 ITSN1Q15811 1721 aa20.08■□□□□ 0.81
SENP3-208ENST00000583277 STRCP1A6NGW2 1772 aa20.08■□□□□ 0.8
SENP3-208ENST00000583277 ADGRL3Q9HAR2 1447 aa20.08■□□□□ 0.8
SENP3-208ENST00000583277 ATP7BP35670 1465 aa20.08■□□□□ 0.8
SENP3-208ENST00000583277 TOPAZ1Q8N9V7 1692 aa20.08■□□□□ 0.8
SENP3-208ENST00000583277 ANKRD36BQ8N2N9 1353 aa20.07■□□□□ 0.8
SENP3-208ENST00000583277 FMN2Q9NZ56 1722 aa20.07■□□□□ 0.8
SENP3-208ENST00000583277 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
SENP3-208ENST00000583277 USP32Q8NFA0 1604 aa20.06■□□□□ 0.8
SENP3-208ENST00000583277 KTN1Q86UP2 1357 aaKnown RBP20.06■□□□□ 0.8
SENP3-208ENST00000583277 PER1O15534 1290 aaPredicted RBP20.05■□□□□ 0.8
SENP3-208ENST00000583277 SLC12A5Q9H2X9 1139 aa20.04■□□□□ 0.8
SENP3-208ENST00000583277 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
SENP3-208ENST00000583277 ANKARQ7Z5J8 1434 aa20.03■□□□□ 0.8
SENP3-208ENST00000583277 NCOA3Q9Y6Q9 1424 aa20.03■□□□□ 0.8
SENP3-208ENST00000583277 PPIP5K1Q6PFW1 1433 aa20.03■□□□□ 0.8
SENP3-208ENST00000583277 NPC1L1Q9UHC9 1359 aa20.02■□□□□ 0.8
SENP3-208ENST00000583277 NUDT16Q96DE0 195 aaKnown RBP20.02■□□□□ 0.8
SENP3-208ENST00000583277 PRKRIP1Q9H875 184 aaPredicted RBP20.02■□□□□ 0.8
SENP3-208ENST00000583277 TERF2IPQ9NYB0 399 aa20.02■□□□□ 0.8
SENP3-208ENST00000583277 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
SENP3-208ENST00000583277 PROSER2Q86WR7 435 aaPredicted RBP20.01■□□□□ 0.79
SENP3-208ENST00000583277 CD163L1Q9NR16 1453 aa20.01■□□□□ 0.79
SENP3-208ENST00000583277 NSD3Q9BZ95 1437 aa20.01■□□□□ 0.79
SENP3-208ENST00000583277 AKAP12Q02952 1782 aa20■□□□□ 0.79
SENP3-208ENST00000583277 A0A1W2PP64 1363 aa20■□□□□ 0.79
SENP3-208ENST00000583277 HDGFL2Q7Z4V5 671 aaPredicted RBP20■□□□□ 0.79
SENP3-208ENST00000583277 PRR36Q9H6K5 1346 aa19.99■□□□□ 0.79
SENP3-208ENST00000583277 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
SENP3-208ENST00000583277 C14orf37Q86TY3 774 aa19.99■□□□□ 0.79
SENP3-208ENST00000583277 MON2Q7Z3U7 1717 aa19.98■□□□□ 0.79
SENP3-208ENST00000583277 RGPD8O14715 1765 aaPredicted RBP19.98■□□□□ 0.79
SENP3-208ENST00000583277 RALBP1Q15311 655 aa19.98■□□□□ 0.79
SENP3-208ENST00000583277 CABP1Q9NZU7 370 aa19.98■□□□□ 0.79
SENP3-208ENST00000583277 AMER1Q5JTC6 1135 aaPredicted RBP19.97■□□□□ 0.79
SENP3-208ENST00000583277 CARD14Q9BXL6 1004 aa19.97■□□□□ 0.79
SENP3-208ENST00000583277 DCCP43146 1447 aa19.97■□□□□ 0.79
SENP3-208ENST00000583277 PARD3Q8TEW0 1356 aa19.97■□□□□ 0.79
SENP3-208ENST00000583277 TMEM94Q12767 1356 aa19.96■□□□□ 0.79
SENP3-208ENST00000583277 CPSF1Q10570 1443 aaKnown RBP19.95■□□□□ 0.78
SENP3-208ENST00000583277 NSD2O96028 1365 aa19.95■□□□□ 0.78
SENP3-208ENST00000583277 CGNL1Q0VF96 1302 aa19.95■□□□□ 0.78
SENP3-208ENST00000583277 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
SENP3-208ENST00000583277 KIF20BQ96Q89 1820 aa19.94■□□□□ 0.78
SENP3-208ENST00000583277 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
SENP3-208ENST00000583277 PLEKHG3A1L390 1219 aa19.93■□□□□ 0.78
SENP3-208ENST00000583277 RBM33Q96EV2 1170 aaKnown RBP19.93■□□□□ 0.78
SENP3-208ENST00000583277 C19orf44Q9H6X5 657 aa19.93■□□□□ 0.78
SENP3-208ENST00000583277 ZNF335Q9H4Z2 1342 aaPredicted RBP19.93■□□□□ 0.78
SENP3-208ENST00000583277 EDC4Q6P2E9 1401 aaKnown RBP19.93■□□□□ 0.78
SENP3-208ENST00000583277 LRRC7Q96NW7 1537 aa19.93■□□□□ 0.78
SENP3-208ENST00000583277 CC2D1BQ5T0F9 858 aaKnown RBP19.92■□□□□ 0.78
SENP3-208ENST00000583277 MYBBP1AQ9BQG0 1328 aaKnown RBP19.91■□□□□ 0.78
SENP3-208ENST00000583277 NRKQ7Z2Y5 1582 aa19.91■□□□□ 0.78
SENP3-208ENST00000583277 NUTM2FA1L443 756 aa19.91■□□□□ 0.78
SENP3-208ENST00000583277 ZNF692Q9BU19 519 aaPredicted RBP19.91■□□□□ 0.78
SENP3-208ENST00000583277 MSH6P52701 1360 aa19.9■□□□□ 0.78
SENP3-208ENST00000583277 POLR3AO14802 1390 aaPredicted RBP19.89■□□□□ 0.77
SENP3-208ENST00000583277 CNGB1Q14028 1251 aaPredicted RBP19.89■□□□□ 0.77
SENP3-208ENST00000583277 KIF1AQ12756 1690 aa19.88■□□□□ 0.77
SENP3-208ENST00000583277 ACEP12821 1306 aa19.87■□□□□ 0.77
SENP3-208ENST00000583277 USP6P35125 1406 aa19.87■□□□□ 0.77
SENP3-208ENST00000583277 ATF3P18847 181 aa19.87■□□□□ 0.77
SENP3-208ENST00000583277 CADPS2Q86UW7 1296 aa19.86■□□□□ 0.77
SENP3-208ENST00000583277 NLRP13Q86W25 1043 aa19.85■□□□□ 0.77
SENP3-208ENST00000583277 BRD4O60885 1362 aaPredicted RBP19.85■□□□□ 0.77
SENP3-208ENST00000583277 C1orf167Q5SNV9 1468 aa19.85■□□□□ 0.77
SENP3-208ENST00000583277 NGDNQ8NEJ9 315 aaKnown RBP19.84■□□□□ 0.77
SENP3-208ENST00000583277 MST1RQ04912 1400 aa19.84■□□□□ 0.77
SENP3-208ENST00000583277 PHF8Q9UPP1 1060 aa19.83■□□□□ 0.77
SENP3-208ENST00000583277 PMFBP1Q8TBY8 1022 aa19.83■□□□□ 0.76
SENP3-208ENST00000583277 MORC1Q86VD1 984 aa19.82■□□□□ 0.76
SENP3-208ENST00000583277 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
SENP3-208ENST00000583277 SSH2Q76I76 1423 aa19.81■□□□□ 0.76
SENP3-208ENST00000583277 LTBP4Q8N2S1 1624 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms