RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 CDCA8Q53HL2 280 aa16.75■□□□□ 0.27
CCDC57-216ENST00000582885 KIF7Q2M1P5 1343 aa16.74■□□□□ 0.27
CCDC57-216ENST00000582885 WASHC2AQ641Q2 1341 aa16.74■□□□□ 0.27
CCDC57-216ENST00000582885 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
CCDC57-216ENST00000582885 TULP4Q9NRJ4 1543 aa16.74■□□□□ 0.27
CCDC57-216ENST00000582885 DISP3Q9P2K9 1392 aa16.74■□□□□ 0.27
CCDC57-216ENST00000582885 PLEKHH1Q9ULM0 1364 aa16.74■□□□□ 0.27
CCDC57-216ENST00000582885 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
CCDC57-216ENST00000582885 NALCNQ8IZF0 1738 aa16.73■□□□□ 0.27
CCDC57-216ENST00000582885 MYOM1P52179 1685 aa16.72■□□□□ 0.27
CCDC57-216ENST00000582885 XIRP1Q702N8 1843 aaKnown RBP16.72■□□□□ 0.27
CCDC57-216ENST00000582885 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
CCDC57-216ENST00000582885 NCOA3Q9Y6Q9 1424 aa16.7■□□□□ 0.26
CCDC57-216ENST00000582885 SAFB2Q14151 953 aaKnown RBP eCLIP16.69■□□□□ 0.26
CCDC57-216ENST00000582885 FMN2Q9NZ56 1722 aa16.69■□□□□ 0.26
CCDC57-216ENST00000582885 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
CCDC57-216ENST00000582885 CDC42BPGQ6DT37 1551 aa16.68■□□□□ 0.26
CCDC57-216ENST00000582885 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
CCDC57-216ENST00000582885 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
CCDC57-216ENST00000582885 ADGRL3Q9HAR2 1447 aa16.66■□□□□ 0.26
CCDC57-216ENST00000582885 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
CCDC57-216ENST00000582885 WASLO00401 505 aaPredicted RBP16.65■□□□□ 0.26
CCDC57-216ENST00000582885 ATAD2Q6PL18 1390 aa16.64■□□□□ 0.26
CCDC57-216ENST00000582885 PROSER2Q86WR7 435 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-216ENST00000582885 CDK19Q9BWU1 502 aa16.64■□□□□ 0.25
CCDC57-216ENST00000582885 NINLQ9Y2I6 1382 aa16.64■□□□□ 0.25
CCDC57-216ENST00000582885 USP32Q8NFA0 1604 aa16.63■□□□□ 0.25
CCDC57-216ENST00000582885 LRRC7Q96NW7 1537 aa16.62■□□□□ 0.25
CCDC57-216ENST00000582885 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
CCDC57-216ENST00000582885 SRPK2P78362 688 aaKnown RBP16.61■□□□□ 0.25
CCDC57-216ENST00000582885 ZNF335Q9H4Z2 1342 aaPredicted RBP16.61■□□□□ 0.25
CCDC57-216ENST00000582885 AKAP12Q02952 1782 aa16.61■□□□□ 0.25
CCDC57-216ENST00000582885 DCCP43146 1447 aa16.61■□□□□ 0.25
CCDC57-216ENST00000582885 POLR3GLQ9BT43 218 aa16.6■□□□□ 0.25
CCDC57-216ENST00000582885 CABP2Q9NPB3 220 aa16.6■□□□□ 0.25
CCDC57-216ENST00000582885 TMEM94Q12767 1356 aa16.6■□□□□ 0.25
CCDC57-216ENST00000582885 ANKARQ7Z5J8 1434 aa16.6■□□□□ 0.25
CCDC57-216ENST00000582885 ATP7BP35670 1465 aa16.6■□□□□ 0.25
CCDC57-216ENST00000582885 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
CCDC57-216ENST00000582885 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
CCDC57-216ENST00000582885 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.24
CCDC57-216ENST00000582885 MON2Q7Z3U7 1717 aa16.57■□□□□ 0.24
CCDC57-216ENST00000582885 NUDT16Q96DE0 195 aaKnown RBP16.56■□□□□ 0.24
CCDC57-216ENST00000582885 CCDC61Q9Y6R9 512 aa16.56■□□□□ 0.24
CCDC57-216ENST00000582885 C14orf37Q86TY3 774 aa16.55■□□□□ 0.24
CCDC57-216ENST00000582885 ANKRD36BQ8N2N9 1353 aa16.54■□□□□ 0.24
CCDC57-216ENST00000582885 PRR36Q9H6K5 1346 aa16.54■□□□□ 0.24
CCDC57-216ENST00000582885 RBM33Q96EV2 1170 aaKnown RBP16.54■□□□□ 0.24
CCDC57-216ENST00000582885 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
CCDC57-216ENST00000582885 MSH6P52701 1360 aa16.53■□□□□ 0.24
CCDC57-216ENST00000582885 SLC12A5Q9H2X9 1139 aa16.53■□□□□ 0.24
CCDC57-216ENST00000582885 PANK3Q9H999 370 aa16.53■□□□□ 0.24
CCDC57-216ENST00000582885 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
CCDC57-216ENST00000582885 KIF1AQ12756 1690 aa16.53■□□□□ 0.24
CCDC57-216ENST00000582885 PLEKHG3A1L390 1219 aa16.52■□□□□ 0.24
CCDC57-216ENST00000582885 PER1O15534 1290 aaPredicted RBP16.52■□□□□ 0.24
CCDC57-216ENST00000582885 TMC1Q8TDI8 760 aa16.52■□□□□ 0.24
CCDC57-216ENST00000582885 CADPS2Q86UW7 1296 aa16.51■□□□□ 0.23
CCDC57-216ENST00000582885 TERF2IPQ9NYB0 399 aa16.51■□□□□ 0.23
CCDC57-216ENST00000582885 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
CCDC57-216ENST00000582885 CPSF1Q10570 1443 aaKnown RBP16.51■□□□□ 0.23
CCDC57-216ENST00000582885 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
CCDC57-216ENST00000582885 ATF3P18847 181 aa16.5■□□□□ 0.23
CCDC57-216ENST00000582885 CABP1Q9NZU7 370 aa16.5■□□□□ 0.23
CCDC57-216ENST00000582885 MST1RQ04912 1400 aa16.49■□□□□ 0.23
CCDC57-216ENST00000582885 NRKQ7Z2Y5 1582 aa16.49■□□□□ 0.23
CCDC57-216ENST00000582885 A0A1W2PP64 1363 aa16.49■□□□□ 0.23
CCDC57-216ENST00000582885 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
CCDC57-216ENST00000582885 HDGFL2Q7Z4V5 671 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-216ENST00000582885 POLR3AO14802 1390 aaPredicted RBP16.48■□□□□ 0.23
CCDC57-216ENST00000582885 NPC1L1Q9UHC9 1359 aa16.48■□□□□ 0.23
CCDC57-216ENST00000582885 ZNF692Q9BU19 519 aaPredicted RBP16.47■□□□□ 0.23
CCDC57-216ENST00000582885 CARD14Q9BXL6 1004 aa16.47■□□□□ 0.23
CCDC57-216ENST00000582885 NUTM2FA1L443 756 aa16.46■□□□□ 0.23
CCDC57-216ENST00000582885 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
CCDC57-216ENST00000582885 IQSEC2Q5JU85 1478 aa16.46■□□□□ 0.23
CCDC57-216ENST00000582885 KTN1Q86UP2 1357 aaKnown RBP16.45■□□□□ 0.22
CCDC57-216ENST00000582885 EDC4Q6P2E9 1401 aaKnown RBP16.45■□□□□ 0.22
CCDC57-216ENST00000582885 NSD3Q9BZ95 1437 aa16.45■□□□□ 0.22
CCDC57-216ENST00000582885 ACEP12821 1306 aa16.45■□□□□ 0.22
CCDC57-216ENST00000582885 BRD4O60885 1362 aaPredicted RBP16.44■□□□□ 0.22
CCDC57-216ENST00000582885 PHF8Q9UPP1 1060 aa16.44■□□□□ 0.22
CCDC57-216ENST00000582885 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
CCDC57-216ENST00000582885 USP6P35125 1406 aa16.43■□□□□ 0.22
CCDC57-216ENST00000582885 NSD2O96028 1365 aa16.42■□□□□ 0.22
CCDC57-216ENST00000582885 ANP32CO43423 234 aa16.42■□□□□ 0.22
CCDC57-216ENST00000582885 USP54Q70EL1 1684 aa16.42■□□□□ 0.22
CCDC57-216ENST00000582885 SSH2Q76I76 1423 aa16.42■□□□□ 0.22
CCDC57-216ENST00000582885 ESCO1Q5FWF5 840 aa16.41■□□□□ 0.22
CCDC57-216ENST00000582885 TRPM3Q9HCF6 1732 aaPredicted RBP16.41■□□□□ 0.22
CCDC57-216ENST00000582885 CGNL1Q0VF96 1302 aa16.41■□□□□ 0.22
CCDC57-216ENST00000582885 NGDNQ8NEJ9 315 aaKnown RBP16.4■□□□□ 0.22
CCDC57-216ENST00000582885 PMFBP1Q8TBY8 1022 aa16.4■□□□□ 0.22
CCDC57-216ENST00000582885 SLAIN2Q9P270 581 aa16.4■□□□□ 0.22
CCDC57-216ENST00000582885 NHSL1Q5SYE7 1610 aa16.4■□□□□ 0.22
CCDC57-216ENST00000582885 ORAI2Q96SN7 254 aa16.39■□□□□ 0.21
CCDC57-216ENST00000582885 PRKRIP1Q9H875 184 aaPredicted RBP16.39■□□□□ 0.21
CCDC57-216ENST00000582885 PARD3Q8TEW0 1356 aa16.38■□□□□ 0.21
CCDC57-216ENST00000582885 RALBP1Q15311 655 aa16.38■□□□□ 0.21
CCDC57-216ENST00000582885 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms