RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.15
CDK5RAP3-225ENST00000582482 GGNBP2Q9H3C7 697 aa14.08□□□□□ -0.15
CDK5RAP3-225ENST00000582482 SLFN5Q08AF3 891 aa14.08□□□□□ -0.16
CDK5RAP3-225ENST00000582482 GLI2P10070 1586 aa14.08□□□□□ -0.16
CDK5RAP3-225ENST00000582482 NEXMIFQ5QGS0 1516 aa14.08□□□□□ -0.16
CDK5RAP3-225ENST00000582482 TULP4Q9NRJ4 1543 aa14.07□□□□□ -0.16
CDK5RAP3-225ENST00000582482 SRPK2P78362 688 aaKnown RBP14.07□□□□□ -0.16
CDK5RAP3-225ENST00000582482 ERICH6Q7L0X2 663 aa14.07□□□□□ -0.16
CDK5RAP3-225ENST00000582482 PRAM1Q96QH2 718 aa14.06□□□□□ -0.16
CDK5RAP3-225ENST00000582482 CFAP74Q9C0B2 1584 aa14.06□□□□□ -0.16
CDK5RAP3-225ENST00000582482 PIK3C2BO00750 1634 aa14.06□□□□□ -0.16
CDK5RAP3-225ENST00000582482 NBR1Q14596 966 aa14.06□□□□□ -0.16
CDK5RAP3-225ENST00000582482 ZC3H13Q5T200 1668 aaKnown RBP14.06□□□□□ -0.16
CDK5RAP3-225ENST00000582482 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
CDK5RAP3-225ENST00000582482 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
CDK5RAP3-225ENST00000582482 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
CDK5RAP3-225ENST00000582482 MYO3AQ8NEV4 1616 aa14.04□□□□□ -0.16
CDK5RAP3-225ENST00000582482 NCKAP5LQ9HCH0 1330 aa14.03□□□□□ -0.16
CDK5RAP3-225ENST00000582482 NEO1Q92859 1461 aa14.03□□□□□ -0.16
CDK5RAP3-225ENST00000582482 ARHGEF28Q8N1W1 1705 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-225ENST00000582482 VGFO15240 615 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-225ENST00000582482 WWC1Q8IX03 1113 aa14.02□□□□□ -0.16
CDK5RAP3-225ENST00000582482 PANK1Q8TE04 598 aa14.02□□□□□ -0.16
CDK5RAP3-225ENST00000582482 FRAT1Q92837 279 aaPredicted RBP14.02□□□□□ -0.16
CDK5RAP3-225ENST00000582482 TCP11L2Q8N4U5 519 aa14.02□□□□□ -0.17
CDK5RAP3-225ENST00000582482 SHPRHQ149N8 1683 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 PDE4AP27815 886 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 NEURL4Q96JN8 1562 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 A0A1W2PP64 1363 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 RIMBP3CA6NJZ7 1639 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 RIMBP3BA6NNM3 1639 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 RIMBP3Q9UFD9 1639 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 SETBP1Q9Y6X0 1596 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 RGS3P49796 1198 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 POGKQ9P215 609 aa14.01□□□□□ -0.17
CDK5RAP3-225ENST00000582482 EVC2Q86UK5 1308 aa14□□□□□ -0.17
CDK5RAP3-225ENST00000582482 U2SURPO15042 1029 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-225ENST00000582482 U2AF1L5P0DN76 240 aaPredicted RBP14□□□□□ -0.17
CDK5RAP3-225ENST00000582482 U2AF1Q01081 240 aaKnown RBP eCLIP14□□□□□ -0.17
CDK5RAP3-225ENST00000582482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
CDK5RAP3-225ENST00000582482 NPC1L1Q9UHC9 1359 aa14□□□□□ -0.17
CDK5RAP3-225ENST00000582482 PPM1GO15355 546 aaPredicted RBP13.99□□□□□ -0.17
CDK5RAP3-225ENST00000582482 PREX1Q8TCU6 1659 aa13.99□□□□□ -0.17
CDK5RAP3-225ENST00000582482 TSR2Q969E8 191 aaKnown RBP13.99□□□□□ -0.17
CDK5RAP3-225ENST00000582482 CLUAP1Q96AJ1 413 aa13.99□□□□□ -0.17
CDK5RAP3-225ENST00000582482 COG6Q9Y2V7 657 aa13.99□□□□□ -0.17
CDK5RAP3-225ENST00000582482 SBNO2Q9Y2G9 1366 aa13.98□□□□□ -0.17
CDK5RAP3-225ENST00000582482 ZBTB22O15209 634 aa13.98□□□□□ -0.17
CDK5RAP3-225ENST00000582482 TRMT2AQ8IZ69 625 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-225ENST00000582482 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
CDK5RAP3-225ENST00000582482 NOP58Q9Y2X3 529 aaKnown RBP13.98□□□□□ -0.17
CDK5RAP3-225ENST00000582482 CGNL1Q0VF96 1302 aa13.98□□□□□ -0.17
CDK5RAP3-225ENST00000582482 CABP1Q9NZU7 370 aa13.98□□□□□ -0.17
CDK5RAP3-225ENST00000582482 RPGRIP1LQ68CZ1 1315 aa13.97□□□□□ -0.17
CDK5RAP3-225ENST00000582482 TMEM131LA2VDJ0 1609 aa13.97□□□□□ -0.17
CDK5RAP3-225ENST00000582482 NUTM2FA1L443 756 aa13.97□□□□□ -0.17
CDK5RAP3-225ENST00000582482 IGHDP01880 384 aa13.97□□□□□ -0.17
CDK5RAP3-225ENST00000582482 SLC4A3P48751 1232 aa13.97□□□□□ -0.17
CDK5RAP3-225ENST00000582482 CDK19Q9BWU1 502 aa13.96□□□□□ -0.17
CDK5RAP3-225ENST00000582482 POLR3AO14802 1390 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-225ENST00000582482 NKTRP30414 1462 aaKnown RBP13.96□□□□□ -0.18
CDK5RAP3-225ENST00000582482 RLBP1P12271 317 aa13.96□□□□□ -0.18
CDK5RAP3-225ENST00000582482 KDM2BQ8NHM5 1336 aa13.95□□□□□ -0.18
CDK5RAP3-225ENST00000582482 PTPRMP28827 1452 aa13.95□□□□□ -0.18
CDK5RAP3-225ENST00000582482 INSRP06213 1382 aa13.95□□□□□ -0.18
CDK5RAP3-225ENST00000582482 CLTCQ00610 1675 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-225ENST00000582482 CANXP27824 592 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-225ENST00000582482 ANP32AP39687 249 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-225ENST00000582482 DIP2BQ9P265 1576 aa13.94□□□□□ -0.18
CDK5RAP3-225ENST00000582482 E9PSI1 815 aa13.94□□□□□ -0.18
CDK5RAP3-225ENST00000582482 FYB1O15117 783 aa13.94□□□□□ -0.18
CDK5RAP3-225ENST00000582482 BACH2Q9BYV9 841 aa13.94□□□□□ -0.18
CDK5RAP3-225ENST00000582482 LAS1LQ9Y4W2 734 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-225ENST00000582482 ANKRD36BQ8N2N9 1353 aa13.94□□□□□ -0.18
CDK5RAP3-225ENST00000582482 YTHDC2Q9H6S0 1430 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-225ENST00000582482 RUNDC1Q96C34 613 aa13.93□□□□□ -0.18
CDK5RAP3-225ENST00000582482 SLC52A1Q9NWF4 448 aa13.93□□□□□ -0.18
CDK5RAP3-225ENST00000582482 TXNDC2Q86VQ3 553 aa13.93□□□□□ -0.18
CDK5RAP3-225ENST00000582482 IPO9Q96P70 1041 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-225ENST00000582482 CD163L1Q9NR16 1453 aa13.92□□□□□ -0.18
CDK5RAP3-225ENST00000582482 TCERG1O14776 1098 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP3-225ENST00000582482 ARHGAP31Q2M1Z3 1444 aa13.91□□□□□ -0.18
CDK5RAP3-225ENST00000582482 ALKQ9UM73 1620 aa13.91□□□□□ -0.18
CDK5RAP3-225ENST00000582482 CEBPAP49715 358 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-225ENST00000582482 THUMPD2Q9BTF0 503 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-225ENST00000582482 IQSEC2Q5JU85 1478 aa13.9□□□□□ -0.18
CDK5RAP3-225ENST00000582482 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
CDK5RAP3-225ENST00000582482 HMOX1P09601 288 aa13.89□□□□□ -0.19
CDK5RAP3-225ENST00000582482 RARSP54136 660 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-225ENST00000582482 METP08581 1390 aa13.89□□□□□ -0.19
CDK5RAP3-225ENST00000582482 CFAP53Q96M91 514 aa13.88□□□□□ -0.19
CDK5RAP3-225ENST00000582482 ZBTB47Q9UFB7 747 aaPredicted RBP13.88□□□□□ -0.19
CDK5RAP3-225ENST00000582482 NME9Q86XW9 330 aa13.88□□□□□ -0.19
CDK5RAP3-225ENST00000582482 SOX12O15370 315 aa13.87□□□□□ -0.19
CDK5RAP3-225ENST00000582482 EMILIN1Q9Y6C2 1016 aa13.87□□□□□ -0.19
CDK5RAP3-225ENST00000582482 ABCC11Q96J66 1382 aa13.87□□□□□ -0.19
CDK5RAP3-225ENST00000582482 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
CDK5RAP3-225ENST00000582482 A2ML1A8K2U0 1454 aa13.86□□□□□ -0.19
CDK5RAP3-225ENST00000582482 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
CDK5RAP3-225ENST00000582482 EXOSC9Q06265 439 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms