RNA–Protein interactions for RNA: ENST00000582037.2

NLK-203, Transcript of nemo like kinase, humanhuman

TSL 2 BASIC

Gene NLK, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-203ENST00000582037 ATAD2Q6PL18 1390 aa17.44■□□□□ 0.38
NLK-203ENST00000582037 TRPC5Q9UL62 973 aaPredicted RBP17.44■□□□□ 0.38
NLK-203ENST00000582037 KIF1BO60333 1816 aa17.44■□□□□ 0.38
NLK-203ENST00000582037 PXDNQ92626 1479 aa17.43■□□□□ 0.38
NLK-203ENST00000582037 NAIPQ13075 1403 aa17.41■□□□□ 0.38
NLK-203ENST00000582037 HFM1A2PYH4 1435 aa17.39■□□□□ 0.37
NLK-203ENST00000582037 VGFO15240 615 aaPredicted RBP17.39■□□□□ 0.37
NLK-203ENST00000582037 MARF1Q9Y4F3 1742 aaKnown RBP17.38■□□□□ 0.37
NLK-203ENST00000582037 XPCQ01831 940 aaPredicted RBP17.38■□□□□ 0.37
NLK-203ENST00000582037 PPLO60437 1756 aa17.38■□□□□ 0.37
NLK-203ENST00000582037 FOXO3O43524 673 aa17.37■□□□□ 0.37
NLK-203ENST00000582037 GJD4Q96KN9 370 aaPredicted RBP17.37■□□□□ 0.37
NLK-203ENST00000582037 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
NLK-203ENST00000582037 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
NLK-203ENST00000582037 GLI3P10071 1580 aa17.35■□□□□ 0.37
NLK-203ENST00000582037 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
NLK-203ENST00000582037 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
NLK-203ENST00000582037 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
NLK-203ENST00000582037 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
NLK-203ENST00000582037 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
NLK-203ENST00000582037 SLIT2O94813 1529 aa17.34■□□□□ 0.37
NLK-203ENST00000582037 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
NLK-203ENST00000582037 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.32■□□□□ 0.36
NLK-203ENST00000582037 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
NLK-203ENST00000582037 BRWD3Q6RI45 1802 aa17.32■□□□□ 0.36
NLK-203ENST00000582037 TECPR2O15040 1411 aa17.32■□□□□ 0.36
NLK-203ENST00000582037 RALGAPBQ86X10 1494 aa17.31■□□□□ 0.36
NLK-203ENST00000582037 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
NLK-203ENST00000582037 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
NLK-203ENST00000582037 SPATA31A3Q5VYP0 1347 aa17.29■□□□□ 0.36
NLK-203ENST00000582037 DEFB132Q7Z7B7 95 aa17.28■□□□□ 0.36
NLK-203ENST00000582037 SPATA31E1Q6ZUB1 1445 aa17.28■□□□□ 0.36
NLK-203ENST00000582037 TMEM132EQ6IEE7 984 aa17.27■□□□□ 0.36
NLK-203ENST00000582037 ABCC11Q96J66 1382 aa17.27■□□□□ 0.36
NLK-203ENST00000582037 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.35
NLK-203ENST00000582037 STK26Q9P289 416 aa17.26■□□□□ 0.35
NLK-203ENST00000582037 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
NLK-203ENST00000582037 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
NLK-203ENST00000582037 SLC4A1APQ9BWU0 796 aaKnown RBP17.26■□□□□ 0.35
NLK-203ENST00000582037 FMN2Q9NZ56 1722 aa17.25■□□□□ 0.35
NLK-203ENST00000582037 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
NLK-203ENST00000582037 IFT172Q9UG01 1749 aa17.25■□□□□ 0.35
NLK-203ENST00000582037 USP32Q8NFA0 1604 aa17.24■□□□□ 0.35
NLK-203ENST00000582037 CABLES1Q8TDN4 633 aa17.23■□□□□ 0.35
NLK-203ENST00000582037 KNDC1Q76NI1 1749 aa17.23■□□□□ 0.35
NLK-203ENST00000582037 KRT28Q7Z3Y7 464 aa17.22■□□□□ 0.35
NLK-203ENST00000582037 RGL3Q3MIN7 710 aa17.21■□□□□ 0.35
NLK-203ENST00000582037 SEPT12Q8IYM1 358 aa17.21■□□□□ 0.35
NLK-203ENST00000582037 PIK3C2GO75747 1445 aa17.21■□□□□ 0.35
NLK-203ENST00000582037 VPS72Q15906 364 aa17.2■□□□□ 0.34
NLK-203ENST00000582037 CCDC144AA2RUR9 1427 aa17.19■□□□□ 0.34
NLK-203ENST00000582037 YTHDC2Q9H6S0 1430 aaKnown RBP17.19■□□□□ 0.34
NLK-203ENST00000582037 KIF1AQ12756 1690 aa17.19■□□□□ 0.34
NLK-203ENST00000582037 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
NLK-203ENST00000582037 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
NLK-203ENST00000582037 PLCH1Q4KWH8 1693 aa17.18■□□□□ 0.34
NLK-203ENST00000582037 FAM83GA6ND36 823 aa17.17■□□□□ 0.34
NLK-203ENST00000582037 SIRT1Q96EB6 747 aa17.17■□□□□ 0.34
NLK-203ENST00000582037 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
NLK-203ENST00000582037 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
NLK-203ENST00000582037 NWD2Q9ULI1 1742 aa17.17■□□□□ 0.34
NLK-203ENST00000582037 LRP5O75197 1615 aa17.16■□□□□ 0.34
NLK-203ENST00000582037 TRIM26Q12899 539 aaPredicted RBP17.16■□□□□ 0.34
NLK-203ENST00000582037 PHF8Q9UPP1 1060 aa17.16■□□□□ 0.34
NLK-203ENST00000582037 UTRNP46939 3433 aa17.15■□□□□ 0.34
NLK-203ENST00000582037 NRXN1Q9ULB1 1477 aa17.15■□□□□ 0.34
NLK-203ENST00000582037 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
NLK-203ENST00000582037 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
NLK-203ENST00000582037 KRT27Q7Z3Y8 459 aa17.14■□□□□ 0.33
NLK-203ENST00000582037 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
NLK-203ENST00000582037 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
NLK-203ENST00000582037 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
NLK-203ENST00000582037 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
NLK-203ENST00000582037 PSDA5PKW4 1024 aaPredicted RBP17.11■□□□□ 0.33
NLK-203ENST00000582037 HRCP23327 699 aa17.11■□□□□ 0.33
NLK-203ENST00000582037 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
NLK-203ENST00000582037 PSME1Q06323 249 aa17.09■□□□□ 0.33
NLK-203ENST00000582037 FAM182BQ5T319 152 aa17.09■□□□□ 0.33
NLK-203ENST00000582037 PMFBP1Q8TBY8 1022 aa17.09■□□□□ 0.33
NLK-203ENST00000582037 PRAM1Q96QH2 718 aa17.09■□□□□ 0.33
NLK-203ENST00000582037 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
NLK-203ENST00000582037 ALS2Q96Q42 1657 aa17.07■□□□□ 0.32
NLK-203ENST00000582037 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
NLK-203ENST00000582037 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
NLK-203ENST00000582037 CCDC9Q9Y3X0 531 aaKnown RBP17.06■□□□□ 0.32
NLK-203ENST00000582037 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
NLK-203ENST00000582037 ARHGEF10O15013 1369 aa17.06■□□□□ 0.32
NLK-203ENST00000582037 EN1Q05925 392 aaPredicted RBP17.06■□□□□ 0.32
NLK-203ENST00000582037 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
NLK-203ENST00000582037 LMOD2Q6P5Q4 547 aa17.06■□□□□ 0.32
NLK-203ENST00000582037 CRYBG1Q9Y4K1 1723 aa17.06■□□□□ 0.32
NLK-203ENST00000582037 HAP1P54257 671 aaPredicted RBP17.05■□□□□ 0.32
NLK-203ENST00000582037 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
NLK-203ENST00000582037 ANKARQ7Z5J8 1434 aa17.04■□□□□ 0.32
NLK-203ENST00000582037 SPATA31A5Q5VU36 1347 aa17.04■□□□□ 0.32
NLK-203ENST00000582037 SPATA31A7Q8IWB4 1347 aa17.04■□□□□ 0.32
NLK-203ENST00000582037 PCGF6Q9BYE7 350 aa17.04■□□□□ 0.32
NLK-203ENST00000582037 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
NLK-203ENST00000582037 ADGRB2O60241 1585 aa17.04■□□□□ 0.32
NLK-203ENST00000582037 DLC1Q96QB1 1528 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms