RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 SIN3AQ96ST3 1273 aa14.9□□□□□ -0.02
PPP4R1-220ENST00000581835 NHSL1Q5SYE7 1610 aa14.9□□□□□ -0.02
PPP4R1-220ENST00000581835 DLC1Q96QB1 1528 aa14.89□□□□□ -0.03
PPP4R1-220ENST00000581835 JCADQ9P266 1359 aa14.88□□□□□ -0.03
PPP4R1-220ENST00000581835 ORAI2Q96SN7 254 aa14.88□□□□□ -0.03
PPP4R1-220ENST00000581835 KIAA1210Q9ULL0 1709 aa14.87□□□□□ -0.03
PPP4R1-220ENST00000581835 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
PPP4R1-220ENST00000581835 PRAM1Q96QH2 718 aa14.87□□□□□ -0.03
PPP4R1-220ENST00000581835 TRAK1Q9UPV9 953 aa14.87□□□□□ -0.03
PPP4R1-220ENST00000581835 ILDR2Q71H61 639 aa14.86□□□□□ -0.03
PPP4R1-220ENST00000581835 L3MBTL2Q969R5 705 aa14.86□□□□□ -0.03
PPP4R1-220ENST00000581835 FMN2Q9NZ56 1722 aa14.86□□□□□ -0.03
PPP4R1-220ENST00000581835 SHPRHQ149N8 1683 aa14.85□□□□□ -0.03
PPP4R1-220ENST00000581835 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
PPP4R1-220ENST00000581835 SAFB2Q14151 953 aaKnown RBP eCLIP14.85□□□□□ -0.03
PPP4R1-220ENST00000581835 POGKQ9P215 609 aa14.85□□□□□ -0.03
PPP4R1-220ENST00000581835 RGPD8O14715 1765 aaPredicted RBP14.84□□□□□ -0.03
PPP4R1-220ENST00000581835 NUTM2FA1L443 756 aa14.84□□□□□ -0.03
PPP4R1-220ENST00000581835 ESCO1Q5FWF5 840 aa14.83□□□□□ -0.04
PPP4R1-220ENST00000581835 LRRC59Q96AG4 307 aaKnown RBP14.83□□□□□ -0.04
PPP4R1-220ENST00000581835 PHF23Q9BUL5 403 aaPredicted RBP14.83□□□□□ -0.04
PPP4R1-220ENST00000581835 ARHGEF28Q8N1W1 1705 aaKnown RBP14.83□□□□□ -0.04
PPP4R1-220ENST00000581835 NBPF1Q3BBV0 1214 aa14.82□□□□□ -0.04
PPP4R1-220ENST00000581835 SPATA31A6Q5VVP1 1343 aa14.82□□□□□ -0.04
PPP4R1-220ENST00000581835 SOS2Q07890 1332 aaPredicted RBP14.81□□□□□ -0.04
PPP4R1-220ENST00000581835 ADGRB2O60241 1585 aa14.81□□□□□ -0.04
PPP4R1-220ENST00000581835 RGS17Q9UGC6 210 aaPredicted RBP14.8□□□□□ -0.04
PPP4R1-220ENST00000581835 FOXO3O43524 673 aa14.79□□□□□ -0.04
PPP4R1-220ENST00000581835 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
PPP4R1-220ENST00000581835 LRP6O75581 1613 aa14.78□□□□□ -0.04
PPP4R1-220ENST00000581835 NPHP3Q7Z494 1330 aa14.78□□□□□ -0.04
PPP4R1-220ENST00000581835 HIRIP3Q9BW71 556 aaPredicted RBP14.78□□□□□ -0.04
PPP4R1-220ENST00000581835 KIF1AQ12756 1690 aa14.77□□□□□ -0.04
PPP4R1-220ENST00000581835 PNPLA6Q8IY17 1366 aa14.77□□□□□ -0.04
PPP4R1-220ENST00000581835 USP32Q8NFA0 1604 aa14.77□□□□□ -0.05
PPP4R1-220ENST00000581835 PXDNQ92626 1479 aa14.76□□□□□ -0.05
PPP4R1-220ENST00000581835 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
PPP4R1-220ENST00000581835 TRPM1Q7Z4N2 1603 aa14.76□□□□□ -0.05
PPP4R1-220ENST00000581835 ANKARQ7Z5J8 1434 aa14.75□□□□□ -0.05
PPP4R1-220ENST00000581835 XPCQ01831 940 aaPredicted RBP14.75□□□□□ -0.05
PPP4R1-220ENST00000581835 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
PPP4R1-220ENST00000581835 NUTM2BA6NNL0 878 aaPredicted RBP14.74□□□□□ -0.05
PPP4R1-220ENST00000581835 NUTM2EB1AL46 878 aaPredicted RBP14.74□□□□□ -0.05
PPP4R1-220ENST00000581835 NUTM2AQ8IVF1 878 aaPredicted RBP14.74□□□□□ -0.05
PPP4R1-220ENST00000581835 TULP4Q9NRJ4 1543 aa14.73□□□□□ -0.05
PPP4R1-220ENST00000581835 NBPF8Q3BBV2 869 aa14.73□□□□□ -0.05
PPP4R1-220ENST00000581835 MEX3CQ5U5Q3 659 aaKnown RBP14.73□□□□□ -0.05
PPP4R1-220ENST00000581835 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
PPP4R1-220ENST00000581835 EIF3AQ14152 1382 aaKnown RBP14.73□□□□□ -0.05
PPP4R1-220ENST00000581835 PRR36Q9H6K5 1346 aa14.72□□□□□ -0.05
PPP4R1-220ENST00000581835 POTEAQ6S8J7 498 aa14.72□□□□□ -0.05
PPP4R1-220ENST00000581835 KRT28Q7Z3Y7 464 aa14.72□□□□□ -0.05
PPP4R1-220ENST00000581835 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
PPP4R1-220ENST00000581835 TONSLQ96HA7 1378 aa14.72□□□□□ -0.05
PPP4R1-220ENST00000581835 PMFBP1Q8TBY8 1022 aa14.71□□□□□ -0.05
PPP4R1-220ENST00000581835 CENPJQ9HC77 1338 aaPredicted RBP14.7□□□□□ -0.06
PPP4R1-220ENST00000581835 SOCS7O14512 581 aa14.7□□□□□ -0.06
PPP4R1-220ENST00000581835 CDK19Q9BWU1 502 aa14.7□□□□□ -0.06
PPP4R1-220ENST00000581835 ROCK2O75116 1388 aaKnown RBP14.7□□□□□ -0.06
PPP4R1-220ENST00000581835 SPATA31A3Q5VYP0 1347 aa14.69□□□□□ -0.06
PPP4R1-220ENST00000581835 QRICH2Q9H0J4 1663 aa14.69□□□□□ -0.06
PPP4R1-220ENST00000581835 ITSN1Q15811 1721 aa14.69□□□□□ -0.06
PPP4R1-220ENST00000581835 PSME1Q06323 249 aa14.68□□□□□ -0.06
PPP4R1-220ENST00000581835 NUDT16Q96DE0 195 aaKnown RBP14.68□□□□□ -0.06
PPP4R1-220ENST00000581835 ATP7BP35670 1465 aa14.68□□□□□ -0.06
PPP4R1-220ENST00000581835 ZNF772Q68DY9 489 aaPredicted RBP14.67□□□□□ -0.06
PPP4R1-220ENST00000581835 SBNO1A3KN83 1393 aa14.67□□□□□ -0.06
PPP4R1-220ENST00000581835 GPRASP1Q5JY77 1395 aa14.67□□□□□ -0.06
PPP4R1-220ENST00000581835 ADAMTS2O95450 1211 aa14.66□□□□□ -0.06
PPP4R1-220ENST00000581835 C8orf37Q96NL8 207 aa14.66□□□□□ -0.06
PPP4R1-220ENST00000581835 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
PPP4R1-220ENST00000581835 AFF2P51816 1311 aa14.66□□□□□ -0.06
PPP4R1-220ENST00000581835 TOPAZ1Q8N9V7 1692 aa14.65□□□□□ -0.06
PPP4R1-220ENST00000581835 TRPM3Q9HCF6 1732 aaPredicted RBP14.65□□□□□ -0.06
PPP4R1-220ENST00000581835 MARF1Q9Y4F3 1742 aaKnown RBP14.65□□□□□ -0.06
PPP4R1-220ENST00000581835 RALGAPBQ86X10 1494 aa14.64□□□□□ -0.07
PPP4R1-220ENST00000581835 NGDNQ8NEJ9 315 aaKnown RBP14.64□□□□□ -0.07
PPP4R1-220ENST00000581835 CCDC61Q9Y6R9 512 aa14.64□□□□□ -0.07
PPP4R1-220ENST00000581835 SRPK2P78362 688 aaKnown RBP14.63□□□□□ -0.07
PPP4R1-220ENST00000581835 NGLY1Q96IV0 654 aa14.63□□□□□ -0.07
PPP4R1-220ENST00000581835 CARD11Q9BXL7 1154 aa14.63□□□□□ -0.07
PPP4R1-220ENST00000581835 CABP2Q9NPB3 220 aa14.63□□□□□ -0.07
PPP4R1-220ENST00000581835 ALS2Q96Q42 1657 aa14.62□□□□□ -0.07
PPP4R1-220ENST00000581835 PLEKHG3A1L390 1219 aa14.62□□□□□ -0.07
PPP4R1-220ENST00000581835 CLSPNQ9HAW4 1339 aa14.62□□□□□ -0.07
PPP4R1-220ENST00000581835 ARHGEF10O15013 1369 aa14.61□□□□□ -0.07
PPP4R1-220ENST00000581835 LMOD2Q6P5Q4 547 aa14.61□□□□□ -0.07
PPP4R1-220ENST00000581835 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
PPP4R1-220ENST00000581835 FNBP4Q8N3X1 1017 aaPredicted RBP14.6□□□□□ -0.07
PPP4R1-220ENST00000581835 CABLES1Q8TDN4 633 aa14.6□□□□□ -0.07
PPP4R1-220ENST00000581835 ABCA3Q99758 1704 aa14.6□□□□□ -0.07
PPP4R1-220ENST00000581835 ACEP12821 1306 aa14.6□□□□□ -0.07
PPP4R1-220ENST00000581835 EVC2Q86UK5 1308 aa14.6□□□□□ -0.07
PPP4R1-220ENST00000581835 PPIP5K1Q6PFW1 1433 aa14.59□□□□□ -0.07
PPP4R1-220ENST00000581835 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.08
PPP4R1-220ENST00000581835 RXRBP28702 533 aa14.58□□□□□ -0.08
PPP4R1-220ENST00000581835 QTRT2Q9H974 415 aaKnown RBP14.58□□□□□ -0.08
PPP4R1-220ENST00000581835 USP21Q9UK80 565 aa14.58□□□□□ -0.08
PPP4R1-220ENST00000581835 SBNO2Q9Y2G9 1366 aa14.58□□□□□ -0.08
PPP4R1-220ENST00000581835 PLEKHG5O94827 1062 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms