RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 COL22A1Q8NFW1 1626 aaPredicted RBP23.46■■□□□ 1.35
ATG13-227ENST00000581416 ABCC11Q96J66 1382 aa23.46■■□□□ 1.35
ATG13-227ENST00000581416 PNPLA6Q8IY17 1366 aa23.45■■□□□ 1.34
ATG13-227ENST00000581416 ORAI2Q96SN7 254 aa23.45■■□□□ 1.34
ATG13-227ENST00000581416 ADGRB1O14514 1584 aa23.44■■□□□ 1.34
ATG13-227ENST00000581416 WAPLQ7Z5K2 1190 aa23.44■■□□□ 1.34
ATG13-227ENST00000581416 STK26Q9P289 416 aa23.44■■□□□ 1.34
ATG13-227ENST00000581416 MARF1Q9Y4F3 1742 aaKnown RBP23.44■■□□□ 1.34
ATG13-227ENST00000581416 C14orf93Q9H972 538 aaKnown RBP23.41■■□□□ 1.34
ATG13-227ENST00000581416 PXDNQ92626 1479 aa23.41■■□□□ 1.34
ATG13-227ENST00000581416 CFAP70Q5T0N1 1121 aa23.4■■□□□ 1.34
ATG13-227ENST00000581416 KIF1AQ12756 1690 aa23.4■■□□□ 1.34
ATG13-227ENST00000581416 USP32Q8NFA0 1604 aa23.4■■□□□ 1.34
ATG13-227ENST00000581416 SOS2Q07890 1332 aaPredicted RBP23.39■■□□□ 1.34
ATG13-227ENST00000581416 DLC1Q96QB1 1528 aa23.38■■□□□ 1.33
ATG13-227ENST00000581416 ARHGEF28Q8N1W1 1705 aaKnown RBP23.37■■□□□ 1.33
ATG13-227ENST00000581416 NUTM2BA6NNL0 878 aaPredicted RBP23.37■■□□□ 1.33
ATG13-227ENST00000581416 NUTM2EB1AL46 878 aaPredicted RBP23.37■■□□□ 1.33
ATG13-227ENST00000581416 HRCP23327 699 aa23.37■■□□□ 1.33
ATG13-227ENST00000581416 NUTM2AQ8IVF1 878 aaPredicted RBP23.37■■□□□ 1.33
ATG13-227ENST00000581416 LRRC59Q96AG4 307 aaKnown RBP23.37■■□□□ 1.33
ATG13-227ENST00000581416 ADGRB2O60241 1585 aa23.36■■□□□ 1.33
ATG13-227ENST00000581416 MEX3CQ5U5Q3 659 aaKnown RBP23.34■■□□□ 1.33
ATG13-227ENST00000581416 DHX57Q6P158 1386 aaKnown RBP23.34■■□□□ 1.33
ATG13-227ENST00000581416 ABCA3Q99758 1704 aa23.31■■□□□ 1.32
ATG13-227ENST00000581416 NUTM2FA1L443 756 aa23.31■■□□□ 1.32
ATG13-227ENST00000581416 SIRT1Q96EB6 747 aa23.31■■□□□ 1.32
ATG13-227ENST00000581416 KIAA1210Q9ULL0 1709 aa23.3■■□□□ 1.32
ATG13-227ENST00000581416 AFF2P51816 1311 aa23.3■■□□□ 1.32
ATG13-227ENST00000581416 ESCO1Q5FWF5 840 aa23.29■■□□□ 1.32
ATG13-227ENST00000581416 ZNF772Q68DY9 489 aaPredicted RBP23.27■■□□□ 1.32
ATG13-227ENST00000581416 TRPM3Q9HCF6 1732 aaPredicted RBP23.26■■□□□ 1.31
ATG13-227ENST00000581416 XPCQ01831 940 aaPredicted RBP23.26■■□□□ 1.31
ATG13-227ENST00000581416 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
ATG13-227ENST00000581416 FOXO3O43524 673 aa23.25■■□□□ 1.31
ATG13-227ENST00000581416 DCAF11Q8TEB1 546 aa23.25■■□□□ 1.31
ATG13-227ENST00000581416 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
ATG13-227ENST00000581416 KDM2AQ9Y2K7 1162 aa23.25■■□□□ 1.31
ATG13-227ENST00000581416 SAFB2Q14151 953 aaKnown RBP eCLIP23.23■■□□□ 1.31
ATG13-227ENST00000581416 C8orf37Q96NL8 207 aa23.23■■□□□ 1.31
ATG13-227ENST00000581416 CDK12Q9NYV4 1490 aaPredicted RBP23.23■■□□□ 1.31
ATG13-227ENST00000581416 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.22■■□□□ 1.31
ATG13-227ENST00000581416 ADAMTS2O95450 1211 aa23.21■■□□□ 1.31
ATG13-227ENST00000581416 ITSN1Q15811 1721 aa23.2■■□□□ 1.3
ATG13-227ENST00000581416 ALS2Q96Q42 1657 aa23.2■■□□□ 1.3
ATG13-227ENST00000581416 CRYBG1Q9Y4K1 1723 aa23.19■■□□□ 1.3
ATG13-227ENST00000581416 TRAK1Q9UPV9 953 aa23.19■■□□□ 1.3
ATG13-227ENST00000581416 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
ATG13-227ENST00000581416 RGS12O14924 1447 aa23.18■■□□□ 1.3
ATG13-227ENST00000581416 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
ATG13-227ENST00000581416 TOPAZ1Q8N9V7 1692 aa23.18■■□□□ 1.3
ATG13-227ENST00000581416 PLCH1Q4KWH8 1693 aa23.17■■□□□ 1.3
ATG13-227ENST00000581416 SPATA31A3Q5VYP0 1347 aa23.15■■□□□ 1.3
ATG13-227ENST00000581416 RXRBP28702 533 aa23.15■■□□□ 1.3
ATG13-227ENST00000581416 PHF8Q9UPP1 1060 aa23.15■■□□□ 1.3
ATG13-227ENST00000581416 TNS3Q68CZ2 1445 aa23.15■■□□□ 1.3
ATG13-227ENST00000581416 PRR36Q9H6K5 1346 aa23.14■■□□□ 1.3
ATG13-227ENST00000581416 STAC3Q96MF2 364 aa23.14■■□□□ 1.29
ATG13-227ENST00000581416 POGKQ9P215 609 aa23.14■■□□□ 1.29
ATG13-227ENST00000581416 BCL9LQ86UU0 1499 aa23.13■■□□□ 1.29
ATG13-227ENST00000581416 NGLY1Q96IV0 654 aa23.13■■□□□ 1.29
ATG13-227ENST00000581416 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
ATG13-227ENST00000581416 ATRNO75882 1429 aa23.13■■□□□ 1.29
ATG13-227ENST00000581416 MINK1Q8N4C8 1332 aaPredicted RBP23.12■■□□□ 1.29
ATG13-227ENST00000581416 KRT28Q7Z3Y7 464 aa23.12■■□□□ 1.29
ATG13-227ENST00000581416 QTRT2Q9H974 415 aaKnown RBP23.12■■□□□ 1.29
ATG13-227ENST00000581416 FNBP4Q8N3X1 1017 aaPredicted RBP23.11■■□□□ 1.29
ATG13-227ENST00000581416 ATP7BP35670 1465 aa23.11■■□□□ 1.29
ATG13-227ENST00000581416 NWD2Q9ULI1 1742 aa23.11■■□□□ 1.29
ATG13-227ENST00000581416 TRPM1Q7Z4N2 1603 aa23.1■■□□□ 1.29
ATG13-227ENST00000581416 QRICH2Q9H0J4 1663 aa23.09■■□□□ 1.29
ATG13-227ENST00000581416 NRAPQ86VF7 1730 aa23.09■■□□□ 1.29
ATG13-227ENST00000581416 BRWD3Q6RI45 1802 aa23.09■■□□□ 1.29
ATG13-227ENST00000581416 SBNO1A3KN83 1393 aa23.09■■□□□ 1.29
ATG13-227ENST00000581416 GLI3P10071 1580 aa23.09■■□□□ 1.29
ATG13-227ENST00000581416 RBM6P78332 1123 aaKnown RBP23.08■■□□□ 1.29
ATG13-227ENST00000581416 USP21Q9UK80 565 aa23.08■■□□□ 1.29
ATG13-227ENST00000581416 SLIT2O94813 1529 aa23.08■■□□□ 1.28
ATG13-227ENST00000581416 PMFBP1Q8TBY8 1022 aa23.07■■□□□ 1.28
ATG13-227ENST00000581416 EP400Q96L91 3159 aa23.06■■□□□ 1.28
ATG13-227ENST00000581416 UPF1Q92900 1129 aaKnown RBP eCLIP23.06■■□□□ 1.281e-7■■■■□ 20.6
ATG13-227ENST00000581416 WASLO00401 505 aaPredicted RBP23.05■■□□□ 1.28
ATG13-227ENST00000581416 NBPF1Q3BBV0 1214 aa23.05■■□□□ 1.28
ATG13-227ENST00000581416 PHRF1Q9P1Y6 1649 aaKnown RBP23.04■■□□□ 1.28
ATG13-227ENST00000581416 EIF3AQ14152 1382 aaKnown RBP23.02■■□□□ 1.28
ATG13-227ENST00000581416 CABLES1Q8TDN4 633 aa23.02■■□□□ 1.28
ATG13-227ENST00000581416 TRPC5Q9UL62 973 aaPredicted RBP23.02■■□□□ 1.28
ATG13-227ENST00000581416 SIN3AQ96ST3 1273 aa23■■□□□ 1.27
ATG13-227ENST00000581416 ARHGEF10O15013 1369 aa23■■□□□ 1.27
ATG13-227ENST00000581416 PSME1Q06323 249 aa22.99■■□□□ 1.27
ATG13-227ENST00000581416 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
ATG13-227ENST00000581416 RALGAPBQ86X10 1494 aa22.98■■□□□ 1.27
ATG13-227ENST00000581416 L3MBTL2Q969R5 705 aa22.97■■□□□ 1.27
ATG13-227ENST00000581416 PLEKHG5O94827 1062 aa22.95■■□□□ 1.26
ATG13-227ENST00000581416 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
ATG13-227ENST00000581416 UNC5CLQ8IV45 518 aa22.93■■□□□ 1.26
ATG13-227ENST00000581416 CDK19Q9BWU1 502 aa22.93■■□□□ 1.26
ATG13-227ENST00000581416 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
ATG13-227ENST00000581416 LMOD2Q6P5Q4 547 aa22.92■■□□□ 1.26
ATG13-227ENST00000581416 GJD4Q96KN9 370 aaPredicted RBP22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms