RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
RFFL-209ENST00000581265 MPHOSPH9Q99550 1183 aa15.86■□□□□ 0.13
RFFL-209ENST00000581265 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
RFFL-209ENST00000581265 RGL3Q3MIN7 710 aa15.84■□□□□ 0.13
RFFL-209ENST00000581265 CCDC144AA2RUR9 1427 aa15.84■□□□□ 0.13
RFFL-209ENST00000581265 PPLO60437 1756 aa15.83■□□□□ 0.12
RFFL-209ENST00000581265 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.12
RFFL-209ENST00000581265 SPATA31E1Q6ZUB1 1445 aa15.83■□□□□ 0.12
RFFL-209ENST00000581265 LAMC1P11047 1609 aa15.83■□□□□ 0.12
RFFL-209ENST00000581265 ACIN1Q9UKV3 1341 aaKnown RBP15.82■□□□□ 0.12
RFFL-209ENST00000581265 ABCC11Q96J66 1382 aa15.8■□□□□ 0.12
RFFL-209ENST00000581265 SF3B2Q13435 895 aaKnown RBP15.8■□□□□ 0.12
RFFL-209ENST00000581265 ESCO1Q5FWF5 840 aa15.8■□□□□ 0.12
RFFL-209ENST00000581265 TECPR2O15040 1411 aa15.79■□□□□ 0.12
RFFL-209ENST00000581265 LRPPRCP42704 1394 aaKnown RBP15.79■□□□□ 0.12
RFFL-209ENST00000581265 WAPLQ7Z5K2 1190 aa15.79■□□□□ 0.12
RFFL-209ENST00000581265 STK26Q9P289 416 aa15.79■□□□□ 0.12
RFFL-209ENST00000581265 NPHP3Q7Z494 1330 aa15.78■□□□□ 0.12
RFFL-209ENST00000581265 TMEM132EQ6IEE7 984 aa15.78■□□□□ 0.12
RFFL-209ENST00000581265 FNBP4Q8N3X1 1017 aaPredicted RBP15.78■□□□□ 0.12
RFFL-209ENST00000581265 FOXO3O43524 673 aa15.77■□□□□ 0.12
RFFL-209ENST00000581265 SIRT1Q96EB6 747 aa15.77■□□□□ 0.12
RFFL-209ENST00000581265 CDC42BPGQ6DT37 1551 aa15.76■□□□□ 0.11
RFFL-209ENST00000581265 C14orf93Q9H972 538 aaKnown RBP15.75■□□□□ 0.11
RFFL-209ENST00000581265 PIK3C2GO75747 1445 aa15.75■□□□□ 0.11
RFFL-209ENST00000581265 ATRNO75882 1429 aa15.75■□□□□ 0.11
RFFL-209ENST00000581265 SRCAPQ6ZRS2 3230 aa15.73■□□□□ 0.11
RFFL-209ENST00000581265 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
RFFL-209ENST00000581265 PLEKHH1Q9ULM0 1364 aa15.73■□□□□ 0.11
RFFL-209ENST00000581265 PXDNQ92626 1479 aa15.72■□□□□ 0.11
RFFL-209ENST00000581265 BLMP54132 1417 aaPredicted RBP15.72■□□□□ 0.11
RFFL-209ENST00000581265 YTHDC2Q9H6S0 1430 aaKnown RBP15.72■□□□□ 0.11
RFFL-209ENST00000581265 XPCQ01831 940 aaPredicted RBP15.72■□□□□ 0.11
RFFL-209ENST00000581265 DEFB132Q7Z7B7 95 aa15.72■□□□□ 0.11
RFFL-209ENST00000581265 GJD4Q96KN9 370 aaPredicted RBP15.72■□□□□ 0.11
RFFL-209ENST00000581265 MYOM2P54296 1465 aa15.71■□□□□ 0.11
RFFL-209ENST00000581265 IFT172Q9UG01 1749 aa15.71■□□□□ 0.11
RFFL-209ENST00000581265 COL22A1Q8NFW1 1626 aaPredicted RBP15.71■□□□□ 0.11
RFFL-209ENST00000581265 CFAP70Q5T0N1 1121 aa15.7■□□□□ 0.1
RFFL-209ENST00000581265 DHX57Q6P158 1386 aaKnown RBP15.69■□□□□ 0.1
RFFL-209ENST00000581265 NRXN1Q9ULB1 1477 aa15.69■□□□□ 0.1
RFFL-209ENST00000581265 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
RFFL-209ENST00000581265 BCL9LQ86UU0 1499 aa15.67■□□□□ 0.1
RFFL-209ENST00000581265 PSDA5PKW4 1024 aaPredicted RBP15.67■□□□□ 0.1
RFFL-209ENST00000581265 KRT28Q7Z3Y7 464 aa15.67■□□□□ 0.1
RFFL-209ENST00000581265 KNDC1Q76NI1 1749 aa15.67■□□□□ 0.1
RFFL-209ENST00000581265 LRP5O75197 1615 aa15.65■□□□□ 0.1
RFFL-209ENST00000581265 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
RFFL-209ENST00000581265 RAB3GAP2Q9H2M9 1393 aa15.64■□□□□ 0.09
RFFL-209ENST00000581265 PRAM1Q96QH2 718 aa15.64■□□□□ 0.09
RFFL-209ENST00000581265 FMN2Q9NZ56 1722 aa15.64■□□□□ 0.09
RFFL-209ENST00000581265 BAG6P46379 1132 aa15.63■□□□□ 0.09
RFFL-209ENST00000581265 PSME1Q06323 249 aa15.63■□□□□ 0.09
RFFL-209ENST00000581265 UNC5CLQ8IV45 518 aa15.63■□□□□ 0.09
RFFL-209ENST00000581265 HRCP23327 699 aa15.62■□□□□ 0.09
RFFL-209ENST00000581265 POGKQ9P215 609 aa15.62■□□□□ 0.09
RFFL-209ENST00000581265 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
RFFL-209ENST00000581265 KIF1AQ12756 1690 aa15.61■□□□□ 0.09
RFFL-209ENST00000581265 SAFB2Q14151 953 aaKnown RBP eCLIP15.61■□□□□ 0.09
RFFL-209ENST00000581265 SEPT12Q8IYM1 358 aa15.61■□□□□ 0.09
RFFL-209ENST00000581265 STAC3Q96MF2 364 aa15.61■□□□□ 0.09
RFFL-209ENST00000581265 SLIT2O94813 1529 aa15.6■□□□□ 0.09
RFFL-209ENST00000581265 A0A0G2JS52 829 aa15.6■□□□□ 0.09
RFFL-209ENST00000581265 HAP1P54257 671 aaPredicted RBP15.6■□□□□ 0.09
RFFL-209ENST00000581265 MYT1Q01538 1121 aa15.6■□□□□ 0.09
RFFL-209ENST00000581265 SBNO1A3KN83 1393 aa15.6■□□□□ 0.09
RFFL-209ENST00000581265 MARF1Q9Y4F3 1742 aaKnown RBP15.6■□□□□ 0.09
RFFL-209ENST00000581265 RALGAPBQ86X10 1494 aa15.59■□□□□ 0.09
RFFL-209ENST00000581265 DLC1Q96QB1 1528 aa15.59■□□□□ 0.09
RFFL-209ENST00000581265 YY1P25490 414 aa15.59■□□□□ 0.09
RFFL-209ENST00000581265 KRT27Q7Z3Y8 459 aa15.58■□□□□ 0.08
RFFL-209ENST00000581265 CABLES1Q8TDN4 633 aa15.58■□□□□ 0.08
RFFL-209ENST00000581265 TRAK1Q9UPV9 953 aa15.58■□□□□ 0.08
RFFL-209ENST00000581265 TNS3Q68CZ2 1445 aa15.58■□□□□ 0.08
RFFL-209ENST00000581265 ANKARQ7Z5J8 1434 aa15.58■□□□□ 0.08
RFFL-209ENST00000581265 DCAF11Q8TEB1 546 aa15.57■□□□□ 0.08
RFFL-209ENST00000581265 KDM2AQ9Y2K7 1162 aa15.57■□□□□ 0.08
RFFL-209ENST00000581265 ADGRB1O14514 1584 aa15.57■□□□□ 0.08
RFFL-209ENST00000581265 RGPD8O14715 1765 aaPredicted RBP15.57■□□□□ 0.08
RFFL-209ENST00000581265 PMFBP1Q8TBY8 1022 aa15.56■□□□□ 0.08
RFFL-209ENST00000581265 ARHGEF10O15013 1369 aa15.56■□□□□ 0.08
RFFL-209ENST00000581265 VPS72Q15906 364 aa15.55■□□□□ 0.08
RFFL-209ENST00000581265 LMOD2Q6P5Q4 547 aa15.55■□□□□ 0.08
RFFL-209ENST00000581265 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.54■□□□□ 0.08
RFFL-209ENST00000581265 GLI3P10071 1580 aa15.54■□□□□ 0.08
RFFL-209ENST00000581265 DCAF8L1A6NGE4 600 aa15.54■□□□□ 0.08
RFFL-209ENST00000581265 ONECUT3O60422 494 aaPredicted RBP15.54■□□□□ 0.08
RFFL-209ENST00000581265 R3HDM1Q15032 1099 aaKnown RBP15.54■□□□□ 0.08
RFFL-209ENST00000581265 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
RFFL-209ENST00000581265 USP32Q8NFA0 1604 aa15.54■□□□□ 0.08
RFFL-209ENST00000581265 MINK1Q8N4C8 1332 aaPredicted RBP15.53■□□□□ 0.08
RFFL-209ENST00000581265 FAM83GA6ND36 823 aa15.53■□□□□ 0.08
RFFL-209ENST00000581265 WASLO00401 505 aaPredicted RBP15.53■□□□□ 0.08
RFFL-209ENST00000581265 PLEKHG5O94827 1062 aa15.53■□□□□ 0.08
RFFL-209ENST00000581265 EIF3AQ14152 1382 aaKnown RBP15.52■□□□□ 0.08
RFFL-209ENST00000581265 PRR36Q9H6K5 1346 aa15.52■□□□□ 0.08
RFFL-209ENST00000581265 EN1Q05925 392 aaPredicted RBP15.52■□□□□ 0.08
RFFL-209ENST00000581265 ADGRB2O60241 1585 aa15.52■□□□□ 0.07
RFFL-209ENST00000581265 GPRASP1Q5JY77 1395 aa15.51■□□□□ 0.07
RFFL-209ENST00000581265 EP400Q96L91 3159 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms