RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 DHX57Q6P158 1386 aaKnown RBP24.82■■□□□ 1.56
CDC42EP4-206ENST00000581014 POTEAQ6S8J7 498 aa24.81■■□□□ 1.56
CDC42EP4-206ENST00000581014 LRRC59Q96AG4 307 aaKnown RBP24.81■■□□□ 1.56
CDC42EP4-206ENST00000581014 CDC42BPGQ6DT37 1551 aa24.8■■□□□ 1.56
CDC42EP4-206ENST00000581014 KNDC1Q76NI1 1749 aa24.79■■□□□ 1.56
CDC42EP4-206ENST00000581014 DCAF11Q8TEB1 546 aa24.79■■□□□ 1.56
CDC42EP4-206ENST00000581014 ORAI2Q96SN7 254 aa24.79■■□□□ 1.56
CDC42EP4-206ENST00000581014 LAMC1P11047 1609 aa24.79■■□□□ 1.56
CDC42EP4-206ENST00000581014 PLEKHH1Q9ULM0 1364 aa24.79■■□□□ 1.56
CDC42EP4-206ENST00000581014 SOS2Q07890 1332 aaPredicted RBP24.76■■□□□ 1.55
CDC42EP4-206ENST00000581014 MEX3CQ5U5Q3 659 aaKnown RBP24.74■■□□□ 1.55
CDC42EP4-206ENST00000581014 DDX17Q92841 729 aaKnown RBP24.74■■□□□ 1.55
CDC42EP4-206ENST00000581014 KDM2AQ9Y2K7 1162 aa24.74■■□□□ 1.55
CDC42EP4-206ENST00000581014 ADGRB1O14514 1584 aa24.74■■□□□ 1.55
CDC42EP4-206ENST00000581014 DLC1Q96QB1 1528 aa24.73■■□□□ 1.55
CDC42EP4-206ENST00000581014 PNPLA6Q8IY17 1366 aa24.7■■□□□ 1.55
CDC42EP4-206ENST00000581014 ESCO1Q5FWF5 840 aa24.7■■□□□ 1.54
CDC42EP4-206ENST00000581014 PRAM1Q96QH2 718 aa24.7■■□□□ 1.54
CDC42EP4-206ENST00000581014 NPHP3Q7Z494 1330 aa24.69■■□□□ 1.54
CDC42EP4-206ENST00000581014 NUTM2BA6NNL0 878 aaPredicted RBP24.67■■□□□ 1.54
CDC42EP4-206ENST00000581014 NUTM2EB1AL46 878 aaPredicted RBP24.67■■□□□ 1.54
CDC42EP4-206ENST00000581014 NUTM2AQ8IVF1 878 aaPredicted RBP24.67■■□□□ 1.54
CDC42EP4-206ENST00000581014 POGKQ9P215 609 aa24.65■■□□□ 1.54
CDC42EP4-206ENST00000581014 ZNF772Q68DY9 489 aaPredicted RBP24.64■■□□□ 1.54
CDC42EP4-206ENST00000581014 TRAK1Q9UPV9 953 aa24.64■■□□□ 1.54
CDC42EP4-206ENST00000581014 FMN2Q9NZ56 1722 aa24.64■■□□□ 1.53
CDC42EP4-206ENST00000581014 FOXO3O43524 673 aa24.63■■□□□ 1.53
CDC42EP4-206ENST00000581014 NUTM2FA1L443 756 aa24.62■■□□□ 1.53
CDC42EP4-206ENST00000581014 PXDNQ92626 1479 aa24.62■■□□□ 1.53
CDC42EP4-206ENST00000581014 COL22A1Q8NFW1 1626 aaPredicted RBP24.61■■□□□ 1.53
CDC42EP4-206ENST00000581014 SAFB2Q14151 953 aaKnown RBP eCLIP24.6■■□□□ 1.53
CDC42EP4-206ENST00000581014 RGPD8O14715 1765 aaPredicted RBP24.59■■□□□ 1.53
CDC42EP4-206ENST00000581014 ANKARQ7Z5J8 1434 aa24.58■■□□□ 1.53
CDC42EP4-206ENST00000581014 ADGRB2O60241 1585 aa24.58■■□□□ 1.52
CDC42EP4-206ENST00000581014 MARF1Q9Y4F3 1742 aaKnown RBP24.58■■□□□ 1.52
CDC42EP4-206ENST00000581014 AFF2P51816 1311 aa24.57■■□□□ 1.52
CDC42EP4-206ENST00000581014 KIF1AQ12756 1690 aa24.56■■□□□ 1.52
CDC42EP4-206ENST00000581014 PHF8Q9UPP1 1060 aa24.56■■□□□ 1.52
CDC42EP4-206ENST00000581014 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
CDC42EP4-206ENST00000581014 WASLO00401 505 aaPredicted RBP24.53■■□□□ 1.52
CDC42EP4-206ENST00000581014 L3MBTL2Q969R5 705 aa24.53■■□□□ 1.52
CDC42EP4-206ENST00000581014 XPCQ01831 940 aaPredicted RBP24.52■■□□□ 1.52
CDC42EP4-206ENST00000581014 KRT28Q7Z3Y7 464 aa24.52■■□□□ 1.52
CDC42EP4-206ENST00000581014 C8orf37Q96NL8 207 aa24.52■■□□□ 1.52
CDC42EP4-206ENST00000581014 SPATA31A3Q5VYP0 1347 aa24.52■■□□□ 1.52
CDC42EP4-206ENST00000581014 KIAA1210Q9ULL0 1709 aa24.52■■□□□ 1.52
CDC42EP4-206ENST00000581014 MINK1Q8N4C8 1332 aaPredicted RBP24.51■■□□□ 1.51
CDC42EP4-206ENST00000581014 PSME1Q06323 249 aa24.5■■□□□ 1.51
CDC42EP4-206ENST00000581014 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
CDC42EP4-206ENST00000581014 SIN3AQ96ST3 1273 aa24.5■■□□□ 1.51
CDC42EP4-206ENST00000581014 HIRIP3Q9BW71 556 aaPredicted RBP24.5■■□□□ 1.51
CDC42EP4-206ENST00000581014 CDK12Q9NYV4 1490 aaPredicted RBP24.5■■□□□ 1.51
CDC42EP4-206ENST00000581014 ADAMTS2O95450 1211 aa24.49■■□□□ 1.51
CDC42EP4-206ENST00000581014 TRIM26Q12899 539 aaPredicted RBP24.49■■□□□ 1.51
CDC42EP4-206ENST00000581014 RXRBP28702 533 aa24.48■■□□□ 1.51
CDC42EP4-206ENST00000581014 FNBP4Q8N3X1 1017 aaPredicted RBP24.48■■□□□ 1.51
CDC42EP4-206ENST00000581014 NGLY1Q96IV0 654 aa24.48■■□□□ 1.51
CDC42EP4-206ENST00000581014 SBNO1A3KN83 1393 aa24.47■■□□□ 1.51
CDC42EP4-206ENST00000581014 PRR36Q9H6K5 1346 aa24.47■■□□□ 1.51
CDC42EP4-206ENST00000581014 TULP4Q9NRJ4 1543 aa24.46■■□□□ 1.51
CDC42EP4-206ENST00000581014 USP32Q8NFA0 1604 aa24.45■■□□□ 1.5
CDC42EP4-206ENST00000581014 ARHGEF28Q8N1W1 1705 aaKnown RBP24.44■■□□□ 1.5
CDC42EP4-206ENST00000581014 PMFBP1Q8TBY8 1022 aa24.43■■□□□ 1.5
CDC42EP4-206ENST00000581014 QTRT2Q9H974 415 aaKnown RBP24.43■■□□□ 1.5
CDC42EP4-206ENST00000581014 RGS12O14924 1447 aa24.43■■□□□ 1.5
CDC42EP4-206ENST00000581014 TNS3Q68CZ2 1445 aa24.43■■□□□ 1.5
CDC42EP4-206ENST00000581014 NEUROD1Q13562 356 aa24.42■■□□□ 1.5
CDC42EP4-206ENST00000581014 ARHGEF10O15013 1369 aa24.41■■□□□ 1.5
CDC42EP4-206ENST00000581014 RBM6P78332 1123 aaKnown RBP24.4■■□□□ 1.5
CDC42EP4-206ENST00000581014 NUDT16Q96DE0 195 aaKnown RBP24.4■■□□□ 1.5
CDC42EP4-206ENST00000581014 CDK19Q9BWU1 502 aa24.4■■□□□ 1.5
CDC42EP4-206ENST00000581014 ABCA3Q99758 1704 aa24.4■■□□□ 1.5
CDC42EP4-206ENST00000581014 USP21Q9UK80 565 aa24.39■■□□□ 1.49
CDC42EP4-206ENST00000581014 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.38■■□□□ 1.49
CDC42EP4-206ENST00000581014 GPRASP1Q5JY77 1395 aa24.38■■□□□ 1.49
CDC42EP4-206ENST00000581014 ATP7BP35670 1465 aa24.38■■□□□ 1.49
CDC42EP4-206ENST00000581014 CENPJQ9HC77 1338 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-206ENST00000581014 TRPC5Q9UL62 973 aaPredicted RBP24.36■■□□□ 1.49
CDC42EP4-206ENST00000581014 CCDC61Q9Y6R9 512 aa24.36■■□□□ 1.49
CDC42EP4-206ENST00000581014 NGDNQ8NEJ9 315 aaKnown RBP24.35■■□□□ 1.49
CDC42EP4-206ENST00000581014 UPF1Q92900 1129 aaKnown RBP eCLIP24.35■■□□□ 1.493e-11■■■■■ 39.4
CDC42EP4-206ENST00000581014 BCL9LQ86UU0 1499 aa24.34■■□□□ 1.49
CDC42EP4-206ENST00000581014 PLEKHG3A1L390 1219 aa24.33■■□□□ 1.49
CDC42EP4-206ENST00000581014 ATRNO75882 1429 aa24.33■■□□□ 1.49
CDC42EP4-206ENST00000581014 PLCH1Q4KWH8 1693 aa24.32■■□□□ 1.48
CDC42EP4-206ENST00000581014 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
CDC42EP4-206ENST00000581014 POLR3AO14802 1390 aaPredicted RBP24.31■■□□□ 1.48
CDC42EP4-206ENST00000581014 ITSN1Q15811 1721 aa24.31■■□□□ 1.48
CDC42EP4-206ENST00000581014 SLIT2O94813 1529 aa24.3■■□□□ 1.48
CDC42EP4-206ENST00000581014 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
CDC42EP4-206ENST00000581014 CABLES1Q8TDN4 633 aa24.3■■□□□ 1.48
CDC42EP4-206ENST00000581014 ROCK2O75116 1388 aaKnown RBP24.29■■□□□ 1.48
CDC42EP4-206ENST00000581014 NBPF8Q3BBV2 869 aa24.29■■□□□ 1.48
CDC42EP4-206ENST00000581014 TRPM1Q7Z4N2 1603 aa24.28■■□□□ 1.48
CDC42EP4-206ENST00000581014 UNC5CLQ8IV45 518 aa24.28■■□□□ 1.48
CDC42EP4-206ENST00000581014 HAP1P54257 671 aaPredicted RBP24.27■■□□□ 1.48
CDC42EP4-206ENST00000581014 ALS2Q96Q42 1657 aa24.26■■□□□ 1.47
CDC42EP4-206ENST00000581014 ACEP12821 1306 aa24.26■■□□□ 1.47
CDC42EP4-206ENST00000581014 NWD2Q9ULI1 1742 aa24.26■■□□□ 1.47
CDC42EP4-206ENST00000581014 SRPK2P78362 688 aaKnown RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms